PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000341809	[[53083409, 53085223], [53085721, 53085756], [53086204, 53086425], [53086538, 53086664], [53088409, 53088574], [53089555, 53089651], [53090153, 53090214], [53091465, 53091680], [53096675, 53097247]]	[[53084948, 53085223], [53085721, 53085756], [53086204, 53086425], [53086538, 53086664], [53088409, 53088574], [53089555, 53089651], [53090153, 53090214], [53091465, 53091680], [53096675, 53097218]]
ENST00000537195	[[53084587, 53085223], [53085721, 53085756], [53086204, 53086425], [53086538, 53086664], [53088409, 53088574], [53089555, 53089651], [53090153, 53090214], [53091465, 53091680], [53091959, 53092044], [53096675, 53097247]]	[[53084948, 53085223], [53085721, 53085756], [53086204, 53086425], [53086538, 53086664], [53088409, 53088574], [53089555, 53089651], [53090153, 53090214], [53091465, 53091524]]
ENST00000553168	[[53084587, 53085223], [53085721, 53085756], [53086204, 53086425], [53086538, 53086664], [53088409, 53088574], [53089555, 53089651], [53090153, 53090214], [53091465, 53091680], [53091959, 53092044], [53096675, 53097247]]	[[53091561, 53091680], [53091959, 53092044], [53096675, 53097218]]
ENST00000550823	[[53086611, 53086664], [53088409, 53089136]]	None
NM_175078	[[53083409, 53085223], [53085721, 53085756], [53086204, 53086425], [53086538, 53086664], [53088409, 53088574], [53089555, 53089651], [53090153, 53090214], [53091465, 53091680], [53096675, 53097247]]	[[53084948, 53085223], [53085721, 53085756], [53086204, 53086425], [53086538, 53086664], [53088409, 53088574], [53089555, 53089651], [53090153, 53090214], [53091465, 53091680], [53096675, 53097218]]

Promoter

Chrom	Start	End	Description
chr12	53097305	53097310	CAGE_peak_1_at_KRT77_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I052867	52867022	52868458	1.09	[{'connected_gene': 'KRT2', 'score': 43.31}, {'connected_gene': 'KRT74', 'score': 11.13}, {'connected_gene': 'KRT79', 'score': 10.87}, {'connected_gene': 'KRT4', 'score': 10.59}, {'connected_gene': 'KRT84', 'score': 10.37}, {'connected_gene': 'KRT8', 'score': 7.39}, {'connected_gene': 'KRT1', 'score': 2.0}, {'connected_gene': 'KRT77', 'score': 1.3}, {'connected_gene': 'RPL7P41', 'score': 0.37}, {'connected_gene': 'KRT78', 'score': 0.37}]
chr12	GH12I052644	52644399	52647459	1.14	[{'connected_gene': 'KRT1', 'score': 11.3}, {'connected_gene': 'KRT77', 'score': 11.16}, {'connected_gene': 'KRT79', 'score': 10.31}, {'connected_gene': 'KRT76', 'score': 10.26}, {'connected_gene': 'KRT4', 'score': 10.26}, {'connected_gene': 'KRT84', 'score': 9.18}, {'connected_gene': 'ENSG00000257700', 'score': 7.47}, {'connected_gene': 'KRT2', 'score': 0.44}, {'connected_gene': 'KRT128P', 'score': 0.39}, {'connected_gene': 'GC12P052549', 'score': 0.15}]
chr12	GH12I052703	52703514	52703573	0.5	[{'connected_gene': 'KRT77', 'score': 550.77}, {'connected_gene': 'KRT126P', 'score': 0.37}]
chr12	GH12I052229	52228477	52228626	0.63	[{'connected_gene': 'KRT77', 'score': 5.0}, {'connected_gene': 'KRT7', 'score': 0.77}, {'connected_gene': 'C12orf80', 'score': 0.39}, {'connected_gene': 'GC12P052156', 'score': 0.19}]
chr12	GH12I052225	52225419	52226234	0.2	[{'connected_gene': 'KRT80', 'score': 11.05}, {'connected_gene': 'KRT86', 'score': 11.0}, {'connected_gene': 'KRT87P', 'score': 10.95}, {'connected_gene': 'KRT83', 'score': 10.63}, {'connected_gene': 'KRT7', 'score': 10.51}, {'connected_gene': 'KRT81', 'score': 10.5}, {'connected_gene': 'KRT77', 'score': 4.71}, {'connected_gene': 'C12orf80', 'score': 0.39}, {'connected_gene': 'GC12P052184', 'score': 0.26}, {'connected_gene': 'GC12P052156', 'score': 0.2}]
chr12	GH12I052689	52689586	52690217	0.31	[{'connected_gene': 'ENSG00000257700', 'score': 0.77}, {'connected_gene': 'KRT1', 'score': 0.44}, {'connected_gene': 'KRT77', 'score': 0.39}]
chr12	GH12I052691	52691001	52691600	0.9	[{'connected_gene': 'ENSG00000257700', 'score': 570.02}, {'connected_gene': 'KRT1', 'score': 7.9}, {'connected_gene': 'KRT77', 'score': 0.39}]