PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000252321	[[5153084, 5155949]]	[[5153313, 5155155]]
NM_002234	[[5153084, 5155954]]	[[5153313, 5155155]]

Promoter

Chrom	Start	End	Description
chr12	5152939	5152954	CAGE_peak_5_at_KCNA5_5end
chr12	5153018	5153070	CAGE_peak_1_at_KCNA5_5end
chr12	5153088	5153101	CAGE_peak_4_at_KCNA5_5end
chr12	5153106	5153117	CAGE_peak_3_at_KCNA5_5end
chr12	5153193	5153203	CAGE_peak_2_at_KCNA5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I005429	5429195	5435179	2.22	[{'connected_gene': 'NTF3', 'score': 566.58}, {'connected_gene': 'LOC105369620', 'score': 550.77}, {'connected_gene': 'KCNA5', 'score': 6.34}, {'connected_gene': 'GC12M005446', 'score': 0.37}]
chr12	GH12I005036	5036076	5037112	0.2	[{'connected_gene': 'LOC390282', 'score': 0.77}, {'connected_gene': 'KCNA5', 'score': 0.44}]
chr12	GH12I005034	5034206	5035388	0.43	[{'connected_gene': 'LOC390282', 'score': 550.77}, {'connected_gene': 'KCNA5', 'score': 0.44}]
chr12	GH12I005035	5035399	5035998	0.2	[{'connected_gene': 'LOC390282', 'score': 0.77}, {'connected_gene': 'KCNA5', 'score': 0.44}]
chr12	GH12I005032	5032667	5034183	0.2	[{'connected_gene': 'LOC390282', 'score': 550.77}, {'connected_gene': 'KCNA5', 'score': 0.39}]
chr12	GH12I005441	5441075	5441224	0.43	[{'connected_gene': 'KCNA5', 'score': 9.93}, {'connected_gene': 'GC12M005446', 'score': 0.44}, {'connected_gene': 'NTF3', 'score': 0.44}]
chr12	GH12I005442	5441595	5441744	0.43	[{'connected_gene': 'KCNA5', 'score': 9.93}, {'connected_gene': 'GC12M005446', 'score': 0.44}, {'connected_gene': 'NTF3', 'score': 0.44}]
chr12	GH12I005082	5082671	5083856	0.31	[{'connected_gene': 'KCNA5', 'score': 11.76}, {'connected_gene': 'KCNA1', 'score': 9.74}, {'connected_gene': 'LOC105369618', 'score': 4.47}, {'connected_gene': 'LOC105369617', 'score': 0.28}, {'connected_gene': 'GC12P005552', 'score': 0.28}]
chr12	GH12I005084	5084355	5084504	0.76	[{'connected_gene': 'KCNA5', 'score': 11.32}, {'connected_gene': 'KCNA1', 'score': 9.74}, {'connected_gene': 'LOC105369617', 'score': 0.28}, {'connected_gene': 'GC12P005552', 'score': 0.28}]
chr12	GH12I005075	5075839	5081546	0.63	[{'connected_gene': 'KCNA5', 'score': 12.06}, {'connected_gene': 'LOC105369618', 'score': 5.19}, {'connected_gene': 'GC12P005552', 'score': 0.29}, {'connected_gene': 'LOC105369617', 'score': 0.26}]
chr12	GH12I005065	5065547	5067019	0.46	[{'connected_gene': 'KCNA5', 'score': 11.83}, {'connected_gene': 'GC12P005552', 'score': 0.34}, {'connected_gene': 'LOC105369617', 'score': 0.22}]
chr12	GH12I005064	5064242	5065113	0.38	[{'connected_gene': 'KCNA5', 'score': 11.83}, {'connected_gene': 'GC12P005552', 'score': 0.37}, {'connected_gene': 'LOC105369617', 'score': 0.22}]
chr12	GH12I005046	5046421	5048754	0.31	[{'connected_gene': 'KCNA5', 'score': 0.77}, {'connected_gene': 'GC12P005552', 'score': 0.77}, {'connected_gene': 'LOC105369617', 'score': 0.19}]
chr12	GH12I005022	5022555	5022704	0.59	[{'connected_gene': 'KCNA5', 'score': 12.04}, {'connected_gene': 'LOC100507560', 'score': 0.77}, {'connected_gene': 'LOC390282', 'score': 0.39}, {'connected_gene': 'ENSG00000256654', 'score': 0.14}]
chr12	GH12I005043	5043855	5044043	1.24	[{'connected_gene': 'KCNA5', 'score': 550.77}, {'connected_gene': 'GC12P005552', 'score': 550.77}]
chr12	GH12I005154	5154195	5154364	0.31	[{'connected_gene': 'LOC105369618', 'score': 18.17}, {'connected_gene': 'KCNA5', 'score': 10.6}, {'connected_gene': 'GC12P005653', 'score': 0.37}, {'connected_gene': 'GC12P005649', 'score': 0.37}, {'connected_gene': 'LOC105369617', 'score': 0.29}, {'connected_gene': 'LOC105369616', 'score': 0.25}]
chr12	GH12I005448	5448983	5449885	0.2	[{'connected_gene': 'GC12M005446', 'score': 550.77}, {'connected_gene': 'KCNA5', 'score': 10.21}, {'connected_gene': 'NTF3', 'score': 0.37}]