PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
KCNA1	3	KCNA4	5	affinity chromatography technology, affinity chromatography technology	Coleman SK (1999), Coleman SK (1999)	2
CNTNAP1	1	KCNA2	6	affinity chromatography technology	Nie DY (2003)	1
KCNA5	2	KCNA2	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Albarwani S (2003), Nitabach MN (2001), Nitabach MN (2001)	3
PTK2B	6	FYN	1	affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology	Ganju RK (1997), Katagiri T (2000), Qian D (1997), Qian D (1997), Marie-Cardine A (1999)	5
KCNA5	2	FYN	1	affinity chromatography technology	Nitabach MN (2001)	1
CNTNAP1	1	KCNA1	3	affinity chromatography technology	Nie DY (2003)	1
KCNA3	3	KCNA1	3	affinity chromatography technology	Coleman SK (1999)	1
KCNA2	6	KCNAB1	0	affinity chromatography technology	Nakahira K (1996)	1
KCNA3	3	DLG4	11	affinity chromatography technology, affinity chromatography technology	Marks DR (2007), Doczi MA (2011)	2
NEU1	1	KCNA4	5	enzymatic study	Manganas LN (2000)	1
DLG4	11	KCNA1	3	two hybrid, pull down	Eldstrom J (2002), Eldstrom J (2002)	2
KCNAB2	3	KCNA4	5	affinity chromatography technology, affinity chromatography technology	Kim SJ (2013), Kim SJ (2013)	2
KCNAB2	3	KCNA5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim SJ (2013), Kim SJ (2013), Huttlin EL (2017)	3
PTK2B	6	KCNA2	6	affinity chromatography technology	Byron KL (2002)	1
RHOA	0	KCNA2	6	affinity chromatography technology, pull down, two hybrid	Cachero TG (1998), Cachero TG (1998), Cachero TG (1998)	3
KCNA2	6	KCNAB2	3	affinity chromatography technology, affinity chromatography technology	Coleman SK (1999), Nakahira K (1996)	2
KCNA3	3	KCNA4	5	affinity chromatography technology	Coleman SK (1999)	1
KCNA3	3	KCNA5	2	fluorescent resonance energy transfe, biochemical, affinity chromatography technology	Vicente R (2008), Vicente R (2008), Huttlin EL (2017)	3
KCNA3	3	KCNA2	6	affinity chromatography technology	Coleman SK (1999)	1
DLG4	11	PTK2B	6	affinity chromatography technology, pull down	Seabold GK (2003), Seabold GK (2003)	2
KCNA5	2	DLG4	11	affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology	Eldstrom J (2003), Eldstrom J (2002), Eldstrom J (2002), Eldstrom J (2002), Mathur R (2006)	5
KCNA2	6	KCNA1	3	affinity chromatography technology, affinity chromatography technology	Coleman SK (1999), Coleman SK (1999)	2
KCNA2	6	CTTN	1	affinity chromatography technology, pull down, fluorescent resonance energy transfe, fluorescent resonance energy transfe	Hattan D (2002), Hattan D (2002), Williams MR (2007), Williams MR (2007)	4
FYN	1	PTPRA	3	affinity chromatography technology	Bhandari V (1998)	1
RTN4	4	KCNA1	3	affinity chromatography technology	Nie DY (2003)	1
KCNA5	2	KCNAB1	0	affinity chromatography technology	David M (2012)	1
FYN	1	KCNA2	6	affinity chromatography technology	Nitabach MN (2001)	1
KCNA2	6	PTPRA	3	affinity chromatography technology, pull down	Tsai W (1999), Tsai W (1999)	2
KCNA2	6	KCNA4	5	affinity chromatography technology, affinity chromatography technology	Coleman SK (1999), Coleman SK (1999)	2
FYN	1	KCNA4	5	affinity chromatography technology	Nitabach MN (2001)	1
RTN4	4	CNTNAP1	1	affinity chromatography technology, affinity chromatography technology	Nie DY (2003), Nie DY (2003)	2
CTTN	1	KCNA3	3	imaging technique	Hajdu P (2015)	1
DLG4	11	KCNA2	6	two hybrid, pull down	Eldstrom J (2002), Eldstrom J (2002)	2
KCNA4	5	DLG4	11	affinity chromatography technology, pull down, two hybrid, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, far western blotting, pull down, pull down, imaging technique, pull down, two hybrid, pull down	Inanobe A (2002), Niethammer M (1998), Kim E (1996), Kim E (1996), Eldstrom J (2002), Eldstrom J (2002), Eldstrom J (2002), Niethammer M (1996), Piserchio A (2002), Imamura F (2002), Imamura F (2002), Imamura F (2002), Kim E (1995), Kim E (1995)	14
KCNA2	6	KCNA2	6	two hybrid	Post MA (1996)	1
FYN	1	DLG4	11	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Tezuka T (1999), Hou XY (2002), Hou XY (2002)	3
KCNAB2	3	KCNAB1	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CAMLG	0	KCNA2	6	two hybrid	Rolland T (2014)	1
NEU1	1	KCNA2	6	enzymatic study	Manganas LN (2000)	1
RTN4	4	KCNA2	6	affinity chromatography technology	Nie DY (2003)	1
KCNA5	2	KCNA4	5	affinity chromatography technology	Nitabach MN (2001)	1