Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000355740 [[90750413, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773875, 90775542]] [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773875, 90774207]]
ENST00000352159 [[90750443, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773856, 90774712]] [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773856, 90773882]]
ENST00000484444 [[90750487, 90750663], [90762785, 90762951], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773875, 90774376]] [[90750633, 90750663], [90762785, 90762951], [90770295, 90770357], [90770509, 90770563]]
ENST00000357339 [[90750534, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90771755, 90771838], [90773099, 90773124], [90773875, 90774207]] [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90771755, 90771838], [90773099, 90773124], [90773875, 90774207]]
ENST00000488877 [[90750608, 90750663], [90762785, 90762951], [90767456, 90767594], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773875, 90774207]] [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90770295, 90770357], [90770509, 90770563]]
ENST00000494410 [[90750608, 90750663], [90762785, 90762951], [90767456, 90767594], [90770295, 90770357], [90770509, 90770572], [90773099, 90773124], [90773875, 90774341]] [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90770295, 90770357], [90770509, 90770563]]
ENST00000479522 [[90750608, 90750663], [90762785, 90762951], [90770295, 90770357], [90771755, 90771838], [90773099, 90773124], [90773875, 90774341]] [[90750633, 90750663], [90762785, 90762951], [90770295, 90770357], [90771755, 90771758]]
ENST00000355279 [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773875, 90774207]] [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773875, 90773887]]
ENST00000492756 [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90770295, 90770357], [90771755, 90771838], [90773099, 90773124], [90773875, 90774207]] [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90770295, 90770357], [90771755, 90771758]]
ENST00000460510 [[90750716, 90751113], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754]] None
ENST00000477270 [[90750776, 90750969], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572]] None
ENST00000313771 [[90751044, 90751383], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773875, 90773934]] None
ENST00000466081 [[90751184, 90751383], [90762785, 90762951], [90767456, 90767594], [90770295, 90770417]] None
ENST00000371857 [[90751187, 90751383], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770709]] None
ENST00000494799 [[90751199, 90751383], [90762785, 90762951], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773875, 90773973]] None
ENST00000487314 [[90751204, 90751383], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90771955, 90771979]] None
NR_028034 [[90750315, 90750663], [90762785, 90762951], [90770295, 90770357], [90771755, 90771838], [90773099, 90773124], [90773875, 90776818]] None
NR_028035 [[90750315, 90750663], [90762785, 90762951], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773875, 90776818]] None
NR_028033 [[90750315, 90750663], [90762785, 90762951], [90767456, 90767594], [90770295, 90770357], [90771755, 90771838], [90773099, 90773124], [90773875, 90776818]] None
NR_135313 [[90750315, 90750663], [90762785, 90762951], [90767456, 90767594], [90770295, 90770357], [90770509, 90770572], [90773099, 90773124], [90773875, 90776818]] None
NR_028036 [[90750315, 90750663], [90762785, 90762951], [90767456, 90767594], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773875, 90776818]] None
NM_152871 [[90750315, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90771755, 90771838], [90773099, 90773124], [90773875, 90776818]] [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90771755, 90771838], [90773099, 90773124], [90773875, 90774207]]
NM_001320619 [[90750315, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90773099, 90773124], [90773875, 90776818]] [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90773099, 90773124], [90773875, 90773876]]
NM_152872 [[90750315, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773875, 90776818]] [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773875, 90773887]]
NM_000043 [[90750315, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773875, 90776818]] [[90750633, 90750663], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773875, 90774207]]
NR_135315 [[90751044, 90751383], [90762785, 90762951], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773875, 90776818]] None
NR_135314 [[90751044, 90751383], [90762785, 90762951], [90767456, 90767594], [90768645, 90768754], [90770295, 90770357], [90770509, 90770572], [90771755, 90771838], [90773099, 90773124], [90773875, 90776818]] None
Promoter
Chrom Start End Description
chr10 90749902 90749913 CAGE_peak_14_at_FAS_5end
chr10 90749936 90749994 CAGE_peak_5_at_FAS_5end
chr10 90750010 90750015 CAGE_peak_15_at_FAS_5end
chr10 90750019 90750057 CAGE_peak_7_at_FAS_5end
chr10 90750301 90750317 CAGE_peak_6_at_FAS_5end
chr10 90750378 90750442 CAGE_peak_2_at_FAS_5end
chr10 90750457 90750492 CAGE_peak_4_at_FAS_5end
chr10 90750493 90750633 CAGE_peak_1_at_FAS_5end
chr10 90751172 90751213 CAGE_peak_3_at_FAS_5end

© 2018 bmi.sjtu.edu.cn. All rights reserved.
浙ICP备18030141号.