PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000368784	[[152635871, 152635905], [152636560, 152637135]]	[[152636581, 152636914]]
NM_178430	[[152635886, 152635905], [152636560, 152637135]]	[[152636581, 152636914]]

Promoter

Chrom	Start	End	Description
chr1	152635854	152635860	CAGE_peak_1_at_LCE2D_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I152663	152663331	152663390	0.5	[{'connected_gene': 'LCE2D', 'score': 550.77}, {'connected_gene': 'LCEP3', 'score': 0.44}]
chr1	GH01I152639	152639882	152641066	0.2	[{'connected_gene': 'LCE2D', 'score': 11.72}, {'connected_gene': 'LCE2C', 'score': 11.67}, {'connected_gene': 'LCE2B', 'score': 11.62}, {'connected_gene': 'LCE3D', 'score': 10.83}, {'connected_gene': 'LCEP4', 'score': 0.77}, {'connected_gene': 'LCE3A', 'score': 0.37}]
chr1	GH01I152675	152675230	152675289	0.5	[{'connected_gene': 'LCE2C', 'score': 550.77}, {'connected_gene': 'LCE2D', 'score': 0.39}]