PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000449498	[[21367370, 21368075]]	[[21367436, 21368009]]
NM_006900	[[21367370, 21368075]]	[[21367436, 21368009]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I021450	21450884	21452280	0.31	[{'connected_gene': 'IFNWP2', 'score': 11.51}, {'connected_gene': 'IFNA8', 'score': 11.48}, {'connected_gene': 'IFNA12P', 'score': 11.46}, {'connected_gene': 'IFNA13', 'score': 11.14}, {'connected_gene': 'IFNA5', 'score': 11.01}, {'connected_gene': 'IFNWP19', 'score': 0.77}, {'connected_gene': 'IFNA1', 'score': 0.39}]
chr9	GH09I021334	21334164	21336011	1.94	[{'connected_gene': 'KLHL9', 'score': 550.77}, {'connected_gene': 'IFNA13', 'score': 12.02}, {'connected_gene': 'IFNA5', 'score': 11.16}, {'connected_gene': 'IFNA12P', 'score': 11.08}, {'connected_gene': 'IFNA8', 'score': 11.07}, {'connected_gene': 'IFNWP2', 'score': 11.05}, {'connected_gene': 'IFNA20P', 'score': 0.39}]
chr9	GH09I021333	21333922	21334071	0.2	[{'connected_gene': 'KLHL9', 'score': 550.77}, {'connected_gene': 'IFNA13', 'score': 11.8}, {'connected_gene': 'IFNA5', 'score': 11.16}, {'connected_gene': 'IFNA12P', 'score': 11.08}, {'connected_gene': 'IFNA8', 'score': 11.06}, {'connected_gene': 'IFNWP2', 'score': 11.05}, {'connected_gene': 'IFNA20P', 'score': 0.39}]
chr9	GH09I021707	21707922	21709554	0.99	[{'connected_gene': 'MTAP', 'score': 15.18}, {'connected_gene': 'IFNA13', 'score': 9.87}, {'connected_gene': 'MIR31', 'score': 9.66}, {'connected_gene': 'IFNA6', 'score': 1.45}, {'connected_gene': 'IFNA1', 'score': 1.29}, {'connected_gene': 'RN7SL151P', 'score': 0.44}]
chr9	GH09I021710	21710251	21712238	0.58	[{'connected_gene': 'MTAP', 'score': 11.37}, {'connected_gene': 'IFNA13', 'score': 9.86}, {'connected_gene': 'MIR31', 'score': 9.66}, {'connected_gene': 'RN7SL151P', 'score': 0.39}]
chr9	GH09I021562	21562617	21573541	0.96	[{'connected_gene': 'MIR31', 'score': 10.25}, {'connected_gene': 'IFNA13', 'score': 10.05}, {'connected_gene': 'MIR31HG', 'score': 0.44}, {'connected_gene': 'ENSG00000227443', 'score': 0.19}]
chr9	GH09I021228	21228231	21228290	0.5	[{'connected_gene': 'IFNA17', 'score': 550.77}, {'connected_gene': 'GC09P021226', 'score': 550.77}, {'connected_gene': 'IFNA12P', 'score': 10.89}, {'connected_gene': 'IFNA8', 'score': 10.89}, {'connected_gene': 'IFNWP2', 'score': 10.88}, {'connected_gene': 'IFNA5', 'score': 10.34}, {'connected_gene': 'IFNA13', 'score': 10.23}, {'connected_gene': 'IFNA20P', 'score': 6.49}, {'connected_gene': 'IFNWP5', 'score': 0.77}]
chr9	GH09I021217	21217363	21217422	0.5	[{'connected_gene': 'IFNA16', 'score': 550.77}, {'connected_gene': 'IFNA13', 'score': 10.82}, {'connected_gene': 'GC09P021226', 'score': 0.44}]
chr9	GH09I021239	21239995	21240054	0.5	[{'connected_gene': 'IFNA14', 'score': 550.77}, {'connected_gene': 'IFNA5', 'score': 11.3}, {'connected_gene': 'IFNA13', 'score': 11.08}, {'connected_gene': 'IFNA22P', 'score': 0.28}]
chr9	GH09I021667	21667999	21669120	0.2	[{'connected_gene': 'IFNA13', 'score': 10.12}, {'connected_gene': 'MIR31', 'score': 9.83}, {'connected_gene': 'KHSRPP1', 'score': 0.31}, {'connected_gene': 'ENSG00000227443', 'score': 0.29}]
chr9	GH09I021709	21709582	21709771	0.72	[{'connected_gene': 'IFNA13', 'score': 9.86}, {'connected_gene': 'MIR31', 'score': 9.66}, {'connected_gene': 'RN7SL151P', 'score': 0.39}, {'connected_gene': 'MTAP', 'score': 0.16}]
chr9	GH09I021286	21286646	21287600	0.38	[{'connected_gene': 'IFNA13', 'score': 10.69}, {'connected_gene': 'IFNA20P', 'score': 7.01}, {'connected_gene': 'IFNA22P', 'score': 0.44}, {'connected_gene': 'IFNA5', 'score': 0.37}]
chr9	GH09I021214	21214001	21214200	0.38	[{'connected_gene': 'IFNA13', 'score': 10.82}, {'connected_gene': 'IFNA20P', 'score': 6.54}, {'connected_gene': 'IFNA16', 'score': 0.77}, {'connected_gene': 'IFNWP18', 'score': 0.77}]
chr9	GH09I021368	21368066	21368125	0.5	[{'connected_gene': 'IFNA13', 'score': 550.77}, {'connected_gene': 'IFNA20P', 'score': 4.49}, {'connected_gene': 'IFNA6', 'score': 0.37}]
chr9	GH09I021195	21195155	21196000	0.56	[{'connected_gene': 'IFNA13', 'score': 10.12}, {'connected_gene': 'IFNA20P', 'score': 6.25}, {'connected_gene': 'IFNWP9', 'score': 0.77}, {'connected_gene': 'IFNA7', 'score': 0.44}]
chr9	GH09I021294	21294402	21294571	0.59	[{'connected_gene': 'IFNA13', 'score': 11.02}, {'connected_gene': 'IFNA5', 'score': 0.39}, {'connected_gene': 'IFNA22P', 'score': 0.37}]
chr9	GH09I021372	21372788	21372828	0.23	[{'connected_gene': 'IFNA13', 'score': 0.77}, {'connected_gene': 'IFNA2', 'score': 0.39}]
chr9	GH09I021357	21357110	21358400	0.95	[{'connected_gene': 'IFNA6', 'score': 0.44}, {'connected_gene': 'IFNA13', 'score': 0.39}]
chr9	GH09I021268	21268001	21268400	0.52	[{'connected_gene': 'IFNA5', 'score': 11.49}, {'connected_gene': 'IFNA12P', 'score': 10.79}, {'connected_gene': 'IFNA8', 'score': 10.78}, {'connected_gene': 'IFNWP2', 'score': 10.78}, {'connected_gene': 'IFNA13', 'score': 10.52}, {'connected_gene': 'MIR31', 'score': 9.04}, {'connected_gene': 'IFNA22P', 'score': 0.39}, {'connected_gene': 'IFNA14', 'score': 0.31}]
chr9	GH09I021381	21381401	21382531	1.04	[{'connected_gene': 'IFNA2', 'score': 0.77}, {'connected_gene': 'IFNA13', 'score': 0.39}]
chr9	GH09I021252	21252925	21253604	0.8	[{'connected_gene': 'IFNA12P', 'score': 11.68}, {'connected_gene': 'IFNA8', 'score': 11.67}, {'connected_gene': 'IFNWP2', 'score': 11.67}, {'connected_gene': 'IFNA13', 'score': 10.36}, {'connected_gene': 'IFNA20P', 'score': 5.94}, {'connected_gene': 'IFNA14', 'score': 0.39}, {'connected_gene': 'IFNA22P', 'score': 0.31}]