PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000281047	[[17997762, 17998368]]	[[17997785, 17998367]]
NM_001105569	[[17997785, 17998367]]	[[17997785, 17998367]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I017537	17537913	17545179	2.6	[{'connected_gene': 'VSNL1', 'score': 558.44}, {'connected_gene': 'RAD51AP2', 'score': 16.75}, {'connected_gene': 'GEN1', 'score': 6.71}, {'connected_gene': 'MSGN1', 'score': 2.18}, {'connected_gene': 'GC02M017549', 'score': 0.44}]
chr2	GH02I017587	17587526	17595519	1.61	[{'connected_gene': 'VSNL1', 'score': 17.94}, {'connected_gene': 'GEN1', 'score': 9.15}, {'connected_gene': 'MSGN1', 'score': 2.48}, {'connected_gene': 'PIR36041', 'score': 0.34}, {'connected_gene': 'GC02M017549', 'score': 0.26}]
chr2	GH02I017821	17821050	17823274	1.04	[{'connected_gene': 'GEN1', 'score': 17.02}, {'connected_gene': 'SMC6', 'score': 12.38}, {'connected_gene': 'GC02M017816', 'score': 0.77}, {'connected_gene': 'MSGN1', 'score': 0.44}]
chr2	GH02I017803	17803706	17805390	1.09	[{'connected_gene': 'GEN1', 'score': 27.83}, {'connected_gene': 'VSNL1', 'score': 5.06}, {'connected_gene': 'LOC105373449', 'score': 0.77}, {'connected_gene': 'MSGN1', 'score': 0.39}]
chr2	GH02I018046	18046626	18049092	0.88	[{'connected_gene': 'GEN1', 'score': 4.85}, {'connected_gene': 'MSGN1', 'score': 2.37}, {'connected_gene': 'GC02M018040', 'score': 0.44}, {'connected_gene': 'ENSG00000212455', 'score': 0.44}, {'connected_gene': 'GC02P018107', 'score': 0.22}, {'connected_gene': 'KCNS3', 'score': 0.09}]
chr2	GH02I017786	17786556	17786600	0.22	[{'connected_gene': 'GEN1', 'score': 28.33}, {'connected_gene': 'MSGN1', 'score': 2.89}, {'connected_gene': 'LOC105373449', 'score': 0.39}, {'connected_gene': 'SMC6', 'score': 0.39}, {'connected_gene': 'GC02M017752', 'score': 0.34}]
chr2	GH02I017805	17805530	17806378	0.72	[{'connected_gene': 'GEN1', 'score': 26.17}, {'connected_gene': 'LOC105373449', 'score': 0.77}, {'connected_gene': 'MSGN1', 'score': 0.39}]
chr2	GH02I017884	17884888	17884952	0.22	[{'connected_gene': 'MSGN1', 'score': 2.74}, {'connected_gene': 'KCNS3', 'score': 0.44}, {'connected_gene': 'GC02P017933', 'score': 0.25}]
chr2	GH02I018180	18180871	18181228	0.22	[{'connected_gene': 'MSGN1', 'score': 2.36}, {'connected_gene': 'GC02P018107', 'score': 0.19}, {'connected_gene': 'GC02P018305', 'score': 0.13}, {'connected_gene': 'KCNS3', 'score': 0.06}]
chr2	GH02I017811	17811615	17817031	1.67	[{'connected_gene': 'MSGN1', 'score': 550.77}, {'connected_gene': 'GEN1', 'score': 19.08}, {'connected_gene': 'GC02M017816', 'score': 0.39}, {'connected_gene': 'LOC105373449', 'score': 0.39}]