PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000570754	[[54869273, 54869713], [54872404, 54872653]]	None
ENST00000397861	[[54869273, 54869713], [54872404, 54872541], [54892229, 54892330], [54893116, 54893371], [54902099, 54902214], [54902441, 54902682], [54910258, 54910703], [54910978, 54911257]]	[[54872424, 54872541], [54892229, 54892330], [54893116, 54893171]]
ENST00000397862	[[54869274, 54869713], [54872404, 54872541], [54892229, 54892330], [54893116, 54893250]]	[[54872424, 54872541], [54892229, 54892330], [54893116, 54893243]]
ENST00000575658	[[54869274, 54869713], [54872404, 54872541], [54892229, 54892330], [54893116, 54893371], [54902099, 54902214], [54902441, 54902682], [54910258, 54910703], [54910978, 54911256]]	[[54872424, 54872541], [54892229, 54892330], [54893116, 54893243]]
ENST00000487705	[[54902107, 54902214], [54902441, 54902682], [54915849, 54916134]]	None
NM_001085430	[[54869273, 54869713], [54872404, 54872541], [54892229, 54892330], [54893116, 54893371], [54902099, 54902214], [54902441, 54902682], [54910258, 54910703], [54910978, 54911256]]	[[54872424, 54872541], [54892229, 54892330], [54893116, 54893171]]

Promoter

Chrom	Start	End	Description
chr17	54893192	54893195	CAGE_peak_14_at_C17orf67_5end
chr17	54893196	54893207	CAGE_peak_9_at_C17orf67_5end
chr17	54893213	54893220	CAGE_peak_12_at_C17orf67_5end
chr17	54893269	54893278	CAGE_peak_11_at_C17orf67_5end
chr17	54893292	54893300	CAGE_peak_13_at_C17orf67_5end
chr17	54893310	54893315	CAGE_peak_15_at_C17orf67_5end
chr17	54911161	54911244	CAGE_peak_1_at_C17orf67_5end
chr17	54911250	54911288	CAGE_peak_2_at_C17orf67_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I056779	56779124	56782145	1.37	[{'connected_gene': 'NOG', 'score': 11.06}, {'connected_gene': 'C17orf67', 'score': 6.53}, {'connected_gene': 'GC17M056765', 'score': 0.39}, {'connected_gene': 'GC17M056800', 'score': 0.34}, {'connected_gene': 'GC17M056657', 'score': 0.15}]
chr17	GH17I056822	56822280	56823143	0.85	[{'connected_gene': 'DGKE', 'score': 8.27}, {'connected_gene': 'C17orf67', 'score': 6.94}, {'connected_gene': 'PIR41486', 'score': 0.39}, {'connected_gene': 'ENSG00000283209', 'score': 0.37}, {'connected_gene': 'GC17M056820', 'score': 0.26}, {'connected_gene': 'GC17M056657', 'score': 0.23}]
chr17	GH17I056832	56832373	56835649	2.04	[{'connected_gene': 'DGKE', 'score': 568.88}, {'connected_gene': 'C17orf67', 'score': 557.4}, {'connected_gene': 'PIR41486', 'score': 550.77}, {'connected_gene': 'GC17M056820', 'score': 0.29}, {'connected_gene': 'GC17M056657', 'score': 0.26}]
chr17	GH17I056798	56798978	56799169	1.06	[{'connected_gene': 'DGKE', 'score': 1.66}, {'connected_gene': 'GC17M056800', 'score': 0.77}, {'connected_gene': 'GC17M056765', 'score': 0.29}, {'connected_gene': 'C17orf67', 'score': 0.28}, {'connected_gene': 'GC17M056657', 'score': 0.18}]
chr17	GH17I056893	56893385	56894343	0.43	[{'connected_gene': 'TRIM25', 'score': 12.58}, {'connected_gene': 'C17orf67', 'score': 10.93}, {'connected_gene': 'MIR3614', 'score': 0.77}]
chr17	GH17I056819	56819601	56820199	1.29	[{'connected_gene': 'TRIM25', 'score': 11.99}, {'connected_gene': 'PIR41486', 'score': 0.39}, {'connected_gene': 'C17orf67', 'score': 0.37}, {'connected_gene': 'ENSG00000283209', 'score': 0.37}, {'connected_gene': 'GC17M056657', 'score': 0.22}]
chr17	GH17I056784	56784747	56788329	1.6	[{'connected_gene': 'C17orf67', 'score': 17.08}, {'connected_gene': 'NOG', 'score': 10.97}, {'connected_gene': 'TRIM25', 'score': 8.71}, {'connected_gene': 'SCPEP1', 'score': 6.4}, {'connected_gene': 'GC17M056800', 'score': 0.37}, {'connected_gene': 'GC17M056765', 'score': 0.37}, {'connected_gene': 'GC17M056657', 'score': 0.17}]
chr17	GH17I056808	56808029	56809493	0.9	[{'connected_gene': 'C17orf67', 'score': 17.12}, {'connected_gene': 'ENSG00000262298', 'score': 13.15}, {'connected_gene': 'DGKE', 'score': 12.67}, {'connected_gene': 'RNU6-1158P', 'score': 10.86}, {'connected_gene': 'ENSG00000283209', 'score': 0.77}, {'connected_gene': 'PIR41486', 'score': 0.31}, {'connected_gene': 'GC17M056657', 'score': 0.2}]
chr17	GH17I056836	56836601	56837200	0.31	[{'connected_gene': 'C17orf67', 'score': 550.77}, {'connected_gene': 'DGKE', 'score': 0.77}, {'connected_gene': 'GC17M056820', 'score': 0.31}, {'connected_gene': 'GC17M056657', 'score': 0.28}]
chr17	GH17I056934	56934360	56934509	0.38	[{'connected_gene': 'C17orf67', 'score': 11.47}, {'connected_gene': 'SCPEP1', 'score': 10.95}, {'connected_gene': 'ENSG00000262298', 'score': 0.44}, {'connected_gene': 'ENSG00000274213', 'score': 0.34}]
chr17	GH17I056937	56937089	56937321	0.49	[{'connected_gene': 'C17orf67', 'score': 11.47}, {'connected_gene': 'SCPEP1', 'score': 10.95}, {'connected_gene': 'ENSG00000262298', 'score': 0.77}, {'connected_gene': 'ENSG00000274213', 'score': 0.34}]
chr17	GH17I056938	56937720	56937869	0.71	[{'connected_gene': 'C17orf67', 'score': 11.47}, {'connected_gene': 'SCPEP1', 'score': 10.95}, {'connected_gene': 'ENSG00000262298', 'score': 0.77}, {'connected_gene': 'ENSG00000274213', 'score': 0.34}]
chr17	GH17I056806	56806554	56807366	0.43	[{'connected_gene': 'C17orf67', 'score': 17.12}, {'connected_gene': 'RNU6-1158P', 'score': 10.86}, {'connected_gene': 'ENSG00000283209', 'score': 0.77}, {'connected_gene': 'PIR41486', 'score': 0.31}, {'connected_gene': 'GC17M056657', 'score': 0.2}]
chr17	GH17I056813	56813473	56813681	0.57	[{'connected_gene': 'C17orf67', 'score': 11.29}, {'connected_gene': 'ENSG00000283209', 'score': 0.44}, {'connected_gene': 'PIR41486', 'score': 0.34}, {'connected_gene': 'GC17M056657', 'score': 0.21}]
chr17	GH17I056793	56793703	56795470	0.71	[{'connected_gene': 'C17orf67', 'score': 17.91}, {'connected_gene': 'ENSG00000262298', 'score': 10.2}, {'connected_gene': 'GC17M056800', 'score': 0.44}, {'connected_gene': 'GC17M056765', 'score': 0.31}, {'connected_gene': 'GC17M056657', 'score': 0.18}]
chr17	GH17I056795	56795560	56795624	0.63	[{'connected_gene': 'C17orf67', 'score': 10.95}, {'connected_gene': 'GC17M056800', 'score': 0.44}, {'connected_gene': 'GC17M056765', 'score': 0.31}, {'connected_gene': 'GC17M056657', 'score': 0.18}]
chr17	GH17I056815	56815732	56816392	0.4	[{'connected_gene': 'C17orf67', 'score': 11.32}, {'connected_gene': 'ENSG00000283209', 'score': 0.39}, {'connected_gene': 'PIR41486', 'score': 0.37}, {'connected_gene': 'GC17M056657', 'score': 0.21}]
chr17	GH17I056903	56903790	56905176	0.38	[{'connected_gene': 'RNU6-1158P', 'score': 11.41}, {'connected_gene': 'C17orf67', 'score': 11.22}, {'connected_gene': 'TRIM25', 'score': 0.44}, {'connected_gene': 'MIR3614', 'score': 0.39}]
chr17	GH17I056901	56901335	56903173	0.79	[{'connected_gene': 'RNU6-1158P', 'score': 12.23}, {'connected_gene': 'C17orf67', 'score': 11.66}, {'connected_gene': 'SCPEP1', 'score': 7.93}, {'connected_gene': 'TRIM25', 'score': 0.39}, {'connected_gene': 'MIR3614', 'score': 0.39}]
chr17	GH17I056898	56898529	56900088	0.46	[{'connected_gene': 'RNU6-1158P', 'score': 12.24}, {'connected_gene': 'C17orf67', 'score': 11.66}, {'connected_gene': 'SCPEP1', 'score': 8.87}, {'connected_gene': 'MIR3614', 'score': 0.44}, {'connected_gene': 'TRIM25', 'score': 0.39}]
chr17	GH17I056897	56897680	56897829	0.66	[{'connected_gene': 'RNU6-1158P', 'score': 12.24}, {'connected_gene': 'C17orf67', 'score': 11.67}, {'connected_gene': 'MIR3614', 'score': 0.44}, {'connected_gene': 'TRIM25', 'score': 0.37}]
chr17	GH17I056899	56897151	56897249	0.4	[{'connected_gene': 'RNU6-1158P', 'score': 12.24}, {'connected_gene': 'C17orf67', 'score': 11.67}, {'connected_gene': 'MIR3614', 'score': 0.44}, {'connected_gene': 'TRIM25', 'score': 0.37}]
chr17	GH17I056889	56889978	56892240	0.67	[{'connected_gene': 'MIR3614', 'score': 550.77}, {'connected_gene': 'TRIM25', 'score': 12.58}, {'connected_gene': 'C17orf67', 'score': 11.23}, {'connected_gene': 'SCPEP1', 'score': 10.64}, {'connected_gene': 'ENSG00000262112', 'score': 0.77}]
chr17	GH17I056939	56939980	56940169	0.74	[{'connected_gene': 'ENSG00000262298', 'score': 550.77}, {'connected_gene': 'C17orf67', 'score': 11.47}, {'connected_gene': 'SCPEP1', 'score': 10.96}, {'connected_gene': 'LOC100419768', 'score': 0.39}, {'connected_gene': 'COIL', 'score': 0.34}]
chr17	GH17I056885	56885709	56888329	1.05	[{'connected_gene': 'ENSG00000262112', 'score': 550.77}, {'connected_gene': 'ENSG00000262298', 'score': 13.18}, {'connected_gene': 'C17orf67', 'score': 10.97}, {'connected_gene': 'MTVR2', 'score': 0.77}, {'connected_gene': 'TRIM25', 'score': 0.31}]
chr17	GH17I056823	56823980	56824069	0.43	[{'connected_gene': 'PIR41486', 'score': 0.44}, {'connected_gene': 'C17orf67', 'score': 0.39}, {'connected_gene': 'ENSG00000283209', 'score': 0.37}, {'connected_gene': 'GC17M056820', 'score': 0.26}, {'connected_gene': 'GC17M056657', 'score': 0.23}]
chr17	GH17I056881	56881706	56882330	0.2	[{'connected_gene': 'GC17P056881', 'score': 550.77}, {'connected_gene': 'GC17P056884', 'score': 550.77}, {'connected_gene': 'GC17P056882', 'score': 550.77}, {'connected_gene': 'GC17P056883', 'score': 550.77}, {'connected_gene': 'C17orf67', 'score': 10.98}]
chr17	GH17I056883	56883458	56884981	0.31	[{'connected_gene': 'GC17P056884', 'score': 550.77}, {'connected_gene': 'GC17P056882', 'score': 550.77}, {'connected_gene': 'MTVR2', 'score': 550.77}, {'connected_gene': 'GC17P056883', 'score': 550.77}, {'connected_gene': 'C17orf67', 'score': 10.97}]
chr17	GH17I056890	56889297	56889804	0.38	[{'connected_gene': 'ENSG00000262112', 'score': 550.77}, {'connected_gene': 'MIR3614', 'score': 550.77}, {'connected_gene': 'C17orf67', 'score': 11.23}, {'connected_gene': 'SCPEP1', 'score': 10.64}, {'connected_gene': 'TRIM25', 'score': 0.34}]