PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000226284	[[88720732, 88720785], [88723499, 88723567], [88723659, 88723710], [88723805, 88723883], [88727273, 88727336], [88731757, 88731916], [88732513, 88733074]]	[[88723513, 88723567], [88723659, 88723710], [88723805, 88723883], [88727273, 88727336], [88731757, 88731916], [88732513, 88733062]]
NM_004967	[[88720701, 88720785], [88723499, 88723567], [88723659, 88723710], [88723805, 88723883], [88727273, 88727336], [88731757, 88731916], [88732513, 88733601]]	[[88723513, 88723567], [88723659, 88723710], [88723805, 88723883], [88727273, 88727336], [88731757, 88731916], [88732513, 88733062]]

Promoter

Chrom	Start	End	Description
chr4	88720698	88720722	CAGE_peak_1_at_IBSP_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I087679	87679089	87680880	0.65	[{'connected_gene': 'DMP1', 'score': 11.08}, {'connected_gene': 'DSPP', 'score': 10.2}, {'connected_gene': 'SPARCL1', 'score': 9.49}, {'connected_gene': 'IBSP', 'score': 4.85}, {'connected_gene': 'ENSG00000249001', 'score': 4.76}, {'connected_gene': 'LOC105377323', 'score': 0.44}]
chr4	GH04I087716	87716009	87718625	0.38	[{'connected_gene': 'HERC3', 'score': 5.91}, {'connected_gene': 'IBSP', 'score': 4.82}, {'connected_gene': 'ENSG00000249001', 'score': 0.37}, {'connected_gene': 'LOC105377323', 'score': 0.26}]
chr4	GH04I087832	87832920	87832979	0.5	[{'connected_gene': 'MEPE', 'score': 550.39}, {'connected_gene': 'IBSP', 'score': 10.58}, {'connected_gene': 'SPARCL1', 'score': 9.26}, {'connected_gene': 'HSP90AB3P', 'score': 0.22}]
chr4	GH04I087823	87823527	87823586	0.5	[{'connected_gene': 'MEPE', 'score': 550.77}, {'connected_gene': 'IBSP', 'score': 10.26}, {'connected_gene': 'HSP90AB3P', 'score': 0.2}]
chr4	GH04I087818	87818859	87820410	0.85	[{'connected_gene': 'MEPE', 'score': 550.77}, {'connected_gene': 'SPP1', 'score': 6.38}, {'connected_gene': 'IBSP', 'score': 0.34}]
chr4	GH04I087806	87806001	87807831	0.76	[{'connected_gene': 'IBSP', 'score': 5.26}, {'connected_gene': 'MEPE', 'score': 0.39}]
chr4	GH04I087799	87799505	87799564	0.5	[{'connected_gene': 'IBSP', 'score': 550.77}, {'connected_gene': 'CHCHD2P7', 'score': 0.39}]
chr4	GH04I087849	87849573	87850200	0.88	[{'connected_gene': 'SPP1', 'score': 22.2}, {'connected_gene': 'IBSP', 'score': 4.58}, {'connected_gene': 'HSD17B11', 'score': 1.87}, {'connected_gene': 'MEPE', 'score': 0.31}, {'connected_gene': 'HSP90AB3P', 'score': 0.26}]
chr4	GH04I087657	87657509	87660717	0.87	[{'connected_gene': 'ENSG00000249001', 'score': 11.42}, {'connected_gene': 'ENSG00000200024', 'score': 11.41}, {'connected_gene': 'DSPP', 'score': 10.93}, {'connected_gene': 'IBSP', 'score': 10.59}, {'connected_gene': 'DMP1', 'score': 0.44}, {'connected_gene': 'LOC105377323', 'score': 0.39}]
chr4	GH04I087732	87732600	87732800	0.2	[{'connected_gene': 'ENSG00000249001', 'score': 550.77}, {'connected_gene': 'DSPP', 'score': 9.44}, {'connected_gene': 'IBSP', 'score': 5.14}, {'connected_gene': 'LOC105377324', 'score': 0.44}, {'connected_gene': 'LOC105377323', 'score': 0.22}]