PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr9	86593238	86593252	CAGE_peak_3_at_HNRNPK_5end
chr9	86594363	86594374	CAGE_peak_23_at_HNRNPK_5end
chr9	86594530	86594564	CAGE_peak_24_at_HNRNPK_5end
chr9	86595113	86595141	CAGE_peak_1_at_HNRNPK_5end
chr9	86595503	86595550	CAGE_peak_2_at_HNRNPK_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I083955	83955322	83957605	1.99	[{'connected_gene': 'C9orf64', 'score': 550.77}, {'connected_gene': 'HNRNPK', 'score': 16.35}, {'connected_gene': 'LOC105376114', 'score': 7.48}, {'connected_gene': 'RMI1', 'score': 6.75}, {'connected_gene': 'KIF27', 'score': 0.29}]
chr9	GH09I084949	84949495	84952728	0.77	[{'connected_gene': 'NAA35', 'score': 41.2}, {'connected_gene': 'HNRNPK', 'score': 40.23}, {'connected_gene': 'LOC389765', 'score': 22.43}, {'connected_gene': 'ENSG00000235298', 'score': 11.5}, {'connected_gene': 'GC09P085030', 'score': 0.18}, {'connected_gene': 'GC09P084671', 'score': 0.06}, {'connected_gene': 'NTRK2', 'score': 0.06}]
chr9	GH09I083508	83508146	83508295	0.64	[{'connected_gene': 'KIF27', 'score': 4.71}, {'connected_gene': 'HNRNPK', 'score': 1.74}, {'connected_gene': 'UBQLN1', 'score': 1.26}, {'connected_gene': 'PIR58953', 'score': 0.77}, {'connected_gene': 'GC09M083513', 'score': 0.77}, {'connected_gene': 'FRMD3', 'score': 0.29}, {'connected_gene': 'GC09M083455', 'score': 0.21}]
chr9	GH09I083977	83977305	83982808	2.29	[{'connected_gene': 'HNRNPK', 'score': 579.02}, {'connected_gene': 'RMI1', 'score': 557.48}, {'connected_gene': 'KIF27', 'score': 37.05}, {'connected_gene': 'C9orf64', 'score': 11.98}, {'connected_gene': 'LOC105376116', 'score': 9.84}, {'connected_gene': 'IDNK', 'score': 8.27}, {'connected_gene': 'GKAP1', 'score': 5.26}, {'connected_gene': 'ENSG00000235298', 'score': 0.44}]
chr9	GH09I083060	83060369	83063775	1.93	[{'connected_gene': 'RASEF', 'score': 550.77}, {'connected_gene': 'HNRNPK', 'score': 16.03}, {'connected_gene': 'PIR40839', 'score': 0.39}]
chr9	GH09I083705	83705512	83709453	2.29	[{'connected_gene': 'LOC105376114', 'score': 582.31}, {'connected_gene': 'UBQLN1', 'score': 550.77}, {'connected_gene': 'HNRNPK', 'score': 20.14}, {'connected_gene': 'KIF27', 'score': 12.64}, {'connected_gene': 'IDNK', 'score': 10.51}, {'connected_gene': 'GC09M083666', 'score': 0.34}]
chr9	GH09I083972	83972027	83972885	0.38	[{'connected_gene': 'ENSG00000235298', 'score': 550.77}, {'connected_gene': 'HNRNPK', 'score': 0.44}]
chr9	GH09I083974	83974968	83975831	0.51	[{'connected_gene': 'ENSG00000235298', 'score': 0.77}, {'connected_gene': 'HNRNPK', 'score': 0.44}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000376281	[[86582997, 86584355], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595417, 86595519]]	[[86584321, 86584355], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]
ENST00000376263	[[86582998, 86584355], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595067, 86595184]]	[[86584321, 86584355], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]
ENST00000376264	[[86582998, 86584295], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595417, 86595569]]	[[86584264, 86584295], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]
ENST00000351839	[[86583111, 86584295], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367]]	[[86584264, 86584295], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]
ENST00000360384	[[86583823, 86584295], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595067, 86595165]]	[[86584264, 86584295], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]
ENST00000493362	[[86584112, 86584355], [86585076, 86585701]]	None
ENST00000492865	[[86584330, 86584355], [86585076, 86585246], [86585651, 86585734], [86585811, 86586061]]	None
ENST00000481820	[[86584410, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586209]]	[[86585066, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586209]]
ENST00000457156	[[86585227, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595067, 86595105]]	[[86585227, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]
ENST00000472778	[[86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595417, 86595531]]	[[86589483, 86589504], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]
ENST00000376256	[[86588206, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590685]]	None
ENST00000483135	[[86591422, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595417, 86595510]]	None
NM_031263	[[86582997, 86584355], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595067, 86595186]]	[[86584321, 86584355], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]
NM_001318188	[[86582997, 86584295], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595067, 86595186]]	[[86584264, 86584295], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]
NM_001318187	[[86582997, 86584355], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595067, 86595186]]	[[86584321, 86584355], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]
NM_001318186	[[86582997, 86584295], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595067, 86595186]]	[[86584264, 86584295], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]
NM_002140	[[86582997, 86584355], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595417, 86595697]]	[[86584321, 86584355], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]
NM_031262	[[86582997, 86584295], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593194], [86593287, 86593367], [86595417, 86595697]]	[[86584264, 86584295], [86585076, 86585246], [86585651, 86585734], [86585811, 86585827], [86586187, 86586271], [86586586, 86586641], [86586796, 86587104], [86587758, 86587887], [86588200, 86588314], [86588816, 86588888], [86589431, 86589504], [86590376, 86590420], [86591909, 86591966], [86592603, 86592701], [86593109, 86593167]]