PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000560699	[[53049636, 53050044], [53072792, 53073380]]	[[53049870, 53050044], [53072792, 53072819]]
ENST00000305901	[[53049637, 53050044], [53080976, 53082209]]	[[53049751, 53050044], [53080976, 53082081]]
ENST00000561401	[[53049637, 53050044], [53083225, 53083273]]	None
ENST00000570208	[[53077921, 53078166], [53079203, 53079324], [53079957, 53080711], [53080976, 53081145], [53081244, 53081593]]	[[53080682, 53080711], [53080976, 53081145], [53081244, 53081593]]
NR_073510	[[53049159, 53050044], [53072792, 53073081]]	None
NM_004498	[[53049159, 53050044], [53080976, 53082209]]	[[53049751, 53050044], [53080976, 53082081]]

Promoter

Chrom	Start	End	Description
chr15	53082178	53082190	CAGE_peak_3_at_ONECUT1_5end
chr15	53082521	53082549	CAGE_peak_1_at_ONECUT1_5end
chr15	53082587	53082599	CAGE_peak_2_at_ONECUT1_5end
chr15	53083268	53083283	CAGE_peak_5_at_ONECUT1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I052789	52789625	52790820	2.05	[{'connected_gene': 'ONECUT1', 'score': 550.77}, {'connected_gene': 'LOC105370824', 'score': 550.77}, {'connected_gene': 'LOC101928499', 'score': 4.87}, {'connected_gene': 'GC15P052780', 'score': 0.44}]
chr15	GH15I052786	52784572	52789059	1.24	[{'connected_gene': 'ONECUT1', 'score': 13.5}, {'connected_gene': 'LOC105370824', 'score': 0.77}, {'connected_gene': 'GC15P052780', 'score': 0.44}]
chr15	GH15I052804	52803453	52803773	0.93	[{'connected_gene': 'LINC02490', 'score': 550.77}, {'connected_gene': 'ONECUT1', 'score': 17.28}, {'connected_gene': 'RNU2-53P', 'score': 9.65}, {'connected_gene': 'LOC101928499', 'score': 0.77}, {'connected_gene': 'PIR33850', 'score': 0.44}, {'connected_gene': 'GC15P052795', 'score': 0.44}]
chr15	GH15I052784	52784024	52784253	0.74	[{'connected_gene': 'LOC101928499', 'score': 5.11}, {'connected_gene': 'GC15P052780', 'score': 0.77}, {'connected_gene': 'ONECUT1', 'score': 0.44}, {'connected_gene': 'LOC105370824', 'score': 0.44}]
chr15	GH15I052783	52783444	52783673	0.76	[{'connected_gene': 'GC15P052780', 'score': 0.77}, {'connected_gene': 'ONECUT1', 'score': 0.44}, {'connected_gene': 'LOC105370824', 'score': 0.44}]
chr15	GH15I052785	52784404	52784553	0.63	[{'connected_gene': 'GC15P052780', 'score': 0.77}, {'connected_gene': 'ONECUT1', 'score': 0.44}, {'connected_gene': 'LOC105370824', 'score': 0.44}]
chr15	GH15I052778	52778604	52778773	0.43	[{'connected_gene': 'GC15P052780', 'score': 550.77}, {'connected_gene': 'ONECUT1', 'score': 0.39}, {'connected_gene': 'GC15P052725', 'score': 0.23}]
chr15	GH15I052765	52765884	52766033	0.43	[{'connected_gene': 'GC15P052780', 'score': 0.39}, {'connected_gene': 'ONECUT1', 'score': 0.31}, {'connected_gene': 'GC15P052725', 'score': 0.26}]
chr15	GH15I052780	52780135	52781200	1.06	[{'connected_gene': 'GC15P052780', 'score': 550.77}, {'connected_gene': 'LOC101928499', 'score': 5.45}, {'connected_gene': 'LOC105370824', 'score': 0.44}, {'connected_gene': 'ONECUT1', 'score': 0.39}]