PPI network (data source: BioGrid)

Symbol A GeneA coding DNM count Symbol B GeneB coding DNM count Interaction detection method Publication Evidence
NTRK1 1 GCN1 6 affinity chromatography technology Emdal KB (2015) 1
NTRK1 1 PDGFRB 8 affinity chromatography technology Emdal KB (2015) 1
RIPK4 0 HELLS 1 affinity chromatography technology Rodriguez J (2016) 1
EGFR 5 HSPA5 0 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Lavictoire SJ (2003), Foerster S (2013), Li J (2013), Yao Z (2017) 4
FOXG1 26 HDAC2 1 affinity chromatography technology Li X (2015) 1
TRIM25 5 MYC 2 affinity chromatography technology Choudhury NR (2017) 1
SMARCAD1 1 HDAC2 1 affinity chromatography technology, affinity chromatography technology Rowbotham SP (2011), Rowbotham SP (2011) 2
USP47 4 HELLS 1 affinity chromatography technology Huttlin EL (2017) 1
MYC 2 TEAD2 2 fluorescent resonance energy transfe Ivanov AA (2017) 1
DNMT1 5 DNMT3B 3 affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, genetic interference, affinity chromatography technology, affinity chromatography technology Lehnertz B (2003), Kim GD (2002), Kim GD (2002), Geiman TM (2004), Woloszynska-Read A (2007), OHagan HM (2011), Rigbolt KT (2011) 7
CDC5L 2 HELLS 1 affinity chromatography technology Lleres D (2010) 1
NTRK1 1 DNMT1 5 affinity chromatography technology Emdal KB (2015) 1
TRIM25 5 APP 1 affinity chromatography technology Choudhury NR (2017) 1
HDAC2 1 HELLS 1 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Zhou R (2009), Zhou R (2009), Myant K (2008) 3
LAMP2 0 HELLS 1 affinity chromatography technology Huttlin EL (2017) 1
NTRK1 1 RPAP3 1 affinity chromatography technology Emdal KB (2015) 1
DNMT1 5 HSPA5 0 affinity chromatography technology Felle M (2011) 1
NTRK1 1 EMC2 3 affinity chromatography technology Emdal KB (2015) 1
SNW1 0 GCN1 6 biochemical, affinity chromatography technology Wan C (2015), Lleres D (2010) 2
SNW1 0 CDC5L 2 affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology Zhang C (2003), Wan C (2015), Lleres D (2010), Lleres D (2010) 4
EGFR 5 HELLS 1 affinity chromatography technology Tong J (2014) 1
CD79B 0 RIPK4 0 affinity chromatography technology Huttlin EL (2017) 1
MYC 2 HDAC2 1 affinity chromatography technology, affinity chromatography technology Koch HB (2007), Hwang IY (2012) 2
CCDC8 1 VCP 6 affinity chromatography technology Hanson D (2014) 1
LYPD3 0 HELLS 1 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
FOXG1 26 HELLS 1 affinity chromatography technology Li X (2015) 1
HDAC1 4 HDAC2 1 biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, imaging technique, affinity chromatography technology Hakimi MA (2002), Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Fischle W (2002), Johnson CA (2002), Fischle W (2001), Fischer DD (2002), Fischer DD (2002), Ashburner BP (2001), Zhang Y (1999), Tong JK (1998), Tong JK (1998), Hassig CA (1998), Hassig CA (1998), Zhang Y (1997), van der Vlag J (1999), van der Vlag J (1999), Noh EJ (2009), Noh EJ (2009), Galasinski SC (2002), Galasinski SC (2002), Galasinski SC (2002), He S (2005), Humphrey GW (2001), Park JH (2004), Park JH (2004), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Adenuga D (2010), Xue Y (1998), Xue Y (1998), Martinez FP (2012), Martinez FP (2012), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Joshi P (2013), Schnur N (2007), Schnur N (2007), Oh YM (2009), Wan C (2015), Hein MY (2015), Chen TC (2014), Huttlin EL (2017) 48
8339 0 WDR76 1 bioid Lambert JP (2015) 1
FOXL1 0 HELLS 1 affinity chromatography technology Li X (2015) 1
CCDC8 1 HSPA5 0 affinity chromatography technology Hanson D (2014) 1
EMC2 3 VAPA 1 affinity chromatography technology Hein MY (2015) 1
RPAP2 3 HELLS 1 affinity chromatography technology Jeronimo C (2007) 1
PVR 1 HELLS 1 affinity chromatography technology Huttlin EL (2017) 1
8339 0 HELLS 1 bioid Lambert JP (2015) 1
NTRK1 1 CDC5L 2 affinity chromatography technology Emdal KB (2015) 1
NTRK1 1 SMARCAD1 1 affinity chromatography technology Emdal KB (2015) 1
CDC14B 1 DNMT1 5 bioid St-Denis N (2016) 1
RPAP2 3 RPAP3 1 affinity chromatography technology Jeronimo C (2007) 1
EGFR 5 HDAC1 4 affinity chromatography technology Yao Z (2017) 1
TRIM25 5 E2F3 0 affinity chromatography technology Choudhury NR (2017) 1
VAPA 1 HELLS 1 affinity chromatography technology Hein MY (2015) 1
RPAP3 1 APP 1 pull down Olah J (2011) 1
TEAD2 2 HELLS 1 affinity chromatography technology Li X (2015) 1
HELLS 1 RCBTB2 1 affinity chromatography technology Huttlin EL (2017) 1
CCDC8 1 HDAC2 1 affinity chromatography technology Hanson D (2014) 1
EGFR 5 VAPA 1 protein complementation assay, affinity chromatography technology Deribe YL (2009), Foerster S (2013) 2
HDAC2 1 SNW1 0 two hybrid, two hybrid Zhou S (2000), Zhou S (2000) 2
VCP 6 APP 1 affinity chromatography technology Jang JK (2017) 1
NTRK1 1 SNW1 0 affinity chromatography technology Emdal KB (2015) 1
APP 1 MYC 2 pull down Virok DP (2011) 1
HDAC1 4 E2F3 0 affinity chromatography technology Chen L (2012) 1
MYC 2 GCN1 6 affinity chromatography technology, two hybrid, affinity chromatography technology Ewing RM (2007), Bandyopadhyay S (2010), Koch HB (2007) 3
DNMT3B 3 HDAC1 4 biochemical, pull down, affinity chromatography technology, pull down, affinity chromatography technology Geiman TM (2004), Suzuki M (2006), Geiman TM (2004), Geiman TM (2004), Cai Y (2014) 5
CDC14B 1 HELLS 1 bioid St-Denis N (2016) 1
MYC 2 NTRK1 1 genetic interference Toyoshima M (2012) 1
VCP 6 TRIM25 5 affinity chromatography technology, affinity chromatography technology Yu CC (2013), Choudhury NR (2017) 2
SNW1 0 SMARCAD1 1 affinity chromatography technology Lleres D (2010) 1
HELLS 1 DNMT1 5 affinity chromatography technology, pull down Myant K (2008), Myant K (2008) 2
EGFR 5 PDGFRB 8 affinity chromatography technology Habib AA (1998) 1
TEKT2 1 HELLS 1 affinity chromatography technology Huttlin EL (2015) 1
RIPK4 0 GCN1 6 affinity chromatography technology Rodriguez J (2016) 1
MYC 2 HELLS 1 affinity chromatography technology Koch HB (2007) 1
CDC5L 2 SMARCAD1 1 affinity chromatography technology Lleres D (2010) 1
NEDD1 1 HELLS 1 affinity chromatography technology Hein MY (2015) 1
NTRK1 1 HELLS 1 affinity chromatography technology Emdal KB (2015) 1
FOXL1 0 HDAC2 1 affinity chromatography technology Li X (2015) 1
C3AR1 1 HELLS 1 affinity chromatography technology Huttlin EL (2017) 1
CBX4 1 HELLS 1 affinity chromatography technology Hein MY (2015) 1
HDAC1 4 WDR5 2 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Joshi P (2013), Xu Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016) 5
SNW1 0 HSPA5 0 affinity chromatography technology, affinity chromatography technology Zhang C (2003), Lleres D (2010) 2
WDR5 2 HDAC2 1 affinity chromatography technology, affinity chromatography technology Huttlin EL (2017), Hauri S (2016) 2
NTRK1 1 EGFR 5 affinity chromatography technology Emdal KB (2015) 1
VAPA 1 APP 1 pull down Olah J (2011) 1
EGFR 5 APP 1 two hybrid, protein complementation assay Kotlyar M (2015), Petschnigg J (2014) 2
RPAP3 1 HELLS 1 affinity chromatography technology Jeronimo C (2007) 1
CD79B 0 HELLS 1 affinity chromatography technology Huttlin EL (2017) 1
SLC39A9 1 HELLS 1 affinity chromatography technology Huttlin EL (2017) 1
HDAC1 4 HELLS 1 imaging technique, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology Zhou R (2009), Zhou R (2009), Zhou R (2009), Zhou R (2009), Myant K (2008) 5
SMARCAD1 1 HDAC1 4 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Rowbotham SP (2011), Rowbotham SP (2011), Rowbotham SP (2011) 3
EGFR 5 GCN1 6 affinity chromatography technology Foerster S (2013) 1
HDAC2 1 DNMT1 5 affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Rountree MR (2000), Rountree MR (2000), Myant K (2008), Cui S (2011), Cai Y (2014), Cai Y (2014) 6
SNW1 0 HELLS 1 affinity chromatography technology Lleres D (2010) 1
TMEM150A 2 HELLS 1 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
TRIM25 5 HSPA5 0 affinity chromatography technology Choudhury NR (2017) 1
NTRK1 1 WDR5 2 affinity chromatography technology Emdal KB (2015) 1
FOXE1 2 HELLS 1 affinity chromatography technology Li X (2015) 1
HSPA5 0 HELLS 1 affinity chromatography technology Hein MY (2015) 1
WDR76 1 HELLS 1 affinity chromatography technology, affinity chromatography technology Gallina I (2015), Huttlin EL (2017) 2
RIPK4 0 RPAP3 1 affinity chromatography technology Rodriguez J (2016) 1
CCDC8 1 HELLS 1 affinity chromatography technology Hanson D (2014) 1
HDAC1 4 MYC 2 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Matsuoka Y (2008), Matsuoka Y (2008), Liu T (2007), Liu T (2007), Liu T (2007), Koch HB (2007), Hwang IY (2012), Hein MY (2015) 8
SNW1 0 MYC 2 affinity chromatography technology, affinity chromatography technology Bres V (2009), Bres V (2009) 2
CDC5L 2 HSPA5 0 affinity chromatography technology Lleres D (2010) 1
E2F3 0 HELLS 1 affinity chromatography technology, pull down, affinity chromatography technology von Eyss B (2011), von Eyss B (2011), von Eyss B (2011) 3
GCN1 6 HELLS 1 biochemical Wan C (2015) 1
WDR5 2 APP 1 pull down, pull down Olah J (2011), Virok DP (2011) 2
NTRK1 1 VAPA 1 affinity chromatography technology Emdal KB (2015) 1
HELLS 1 WDR5 2 biochemical Wan C (2015) 1
NTRK1 1 VCP 6 affinity chromatography technology Emdal KB (2015) 1
HELLS 1 DNMT3B 3 affinity chromatography technology, pull down Myant K (2008), Myant K (2008) 2
TRIM25 5 HELLS 1 affinity chromatography technology Choudhury NR (2017) 1
TMEM171 1 HELLS 1 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
VCP 6 HSPA5 0 affinity chromatography technology Yu CC (2013) 1
CCDC8 1 EMC2 3 affinity chromatography technology Hanson D (2014) 1
FOXQ1 0 HELLS 1 affinity chromatography technology Li X (2015) 1
SMARCAD1 1 HELLS 1 affinity chromatography technology Rowbotham SP (2011) 1
GCN1 6 DNMT1 5 biochemical Wan C (2015) 1
NTRK1 1 HSPA5 0 affinity chromatography technology Emdal KB (2015) 1
CCDC8 1 TRIM25 5 affinity chromatography technology Hanson D (2014) 1
HELLS 1 APP 1 pull down Olah J (2011) 1
CDC5L 2 GCN1 6 affinity chromatography technology, biochemical, affinity chromatography technology Ajuh P (2000), Ajuh P (2000), Lleres D (2010) 3
SNW1 0 WDR5 2 affinity chromatography technology Lleres D (2010) 1
DNMT1 5 HDAC1 4 biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Robertson KD (2000), Achour M (2008), Achour M (2008), Kimura H (2003), Zhang Q (2005), Myant K (2008), Schnekenburger M (2007), Kang KA (2012), Cui S (2011), Cui S (2011), Hervouet E (2010), Cai Y (2014), Cai Y (2014), Yuan K (2016), Yuan K (2016) 15
EGFR 5 TEKT2 1 affinity chromatography technology Yao Z (2017) 1
FOXA3 0 HDAC2 1 affinity chromatography technology Li X (2015) 1
EMC2 3 HELLS 1 affinity chromatography technology Hein MY (2015) 1
FOXA3 0 HELLS 1 affinity chromatography technology Li X (2015) 1
NTRK1 1 USP47 4 affinity chromatography technology Emdal KB (2015) 1
DNMT3B 3 HDAC2 1 affinity chromatography technology, pull down, affinity chromatography technology Geiman TM (2004), Geiman TM (2004), Cai Y (2014) 3
FOXL1 0 SMARCAD1 1 affinity chromatography technology Li X (2015) 1
VCP 6 HELLS 1 affinity chromatography technology Yu CC (2013) 1
TRIM25 5 PVR 1 affinity chromatography technology Choudhury NR (2017) 1
8339 0 CBX4 1 bioid Lambert JP (2015) 1
CCDC8 1 GCN1 6 affinity chromatography technology Hanson D (2014) 1
VAPA 1 VCP 6 affinity chromatography technology Baron Y (2014) 1
PDGFRB 8 HELLS 1 affinity chromatography technology Huttlin EL (2017) 1
F9 0 HELLS 1 affinity chromatography technology Huttlin EL (2017) 1
WDR5 2 MYC 2 affinity chromatography technology Carugo A (2016) 1
NTRK1 1 HDAC2 1 affinity chromatography technology Emdal KB (2015) 1