PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000443765	[[37523911, 37524194], [37526650, 37526736], [37539711, 37539863], [37546113, 37546173], [37559763, 37559877], [37563620, 37563692], [37569125, 37569172], [37569561, 37569733], [37573371, 37573504]]	[[37524078, 37524194], [37526650, 37526736], [37539711, 37539863], [37546113, 37546173], [37559763, 37559877], [37563620, 37563692], [37569125, 37569172], [37569561, 37569733], [37573371, 37573437]]
ENST00000239891	[[37523966, 37524194], [37526650, 37526736], [37539711, 37539863], [37546113, 37546173], [37559763, 37559877], [37563620, 37563713], [37567740, 37567809], [37569125, 37569172], [37569561, 37569733], [37573371, 37573504]]	[[37524078, 37524194], [37526650, 37526736], [37539711, 37539863], [37546113, 37546173], [37559763, 37559877], [37563620, 37563713], [37567740, 37567809], [37569125, 37569172], [37569561, 37569733], [37573371, 37573437]]
ENST00000486410	[[37523985, 37524194], [37526650, 37527006]]	None
ENST00000460230	[[37524130, 37524194], [37526650, 37526736], [37539711, 37539863], [37541808, 37542193]]	None
ENST00000413537	[[37524161, 37524194], [37526650, 37526736], [37539711, 37539863], [37541808, 37541944], [37546113, 37546173], [37559763, 37559877], [37563620, 37563713], [37567740, 37567809], [37569125, 37569172], [37569561, 37569733], [37573371, 37573473]]	[[37541872, 37541944], [37546113, 37546173], [37559763, 37559877], [37563620, 37563713], [37567740, 37567809], [37569125, 37569172], [37569561, 37569733], [37573371, 37573437]]
ENST00000496689	[[37559785, 37559877], [37563620, 37563713], [37567740, 37567809], [37569561, 37569733], [37574068, 37574398]]	None
NM_013338	[[37523906, 37524194], [37526650, 37526736], [37539711, 37539863], [37546113, 37546173], [37559763, 37559877], [37563620, 37563713], [37567740, 37567809], [37569125, 37569172], [37569561, 37569733], [37573371, 37573504]]	[[37524078, 37524194], [37526650, 37526736], [37539711, 37539863], [37546113, 37546173], [37559763, 37559877], [37563620, 37563713], [37567740, 37567809], [37569125, 37569172], [37569561, 37569733], [37573371, 37573437]]
NM_001142364	[[37523906, 37524194], [37526650, 37526736], [37539711, 37539863], [37546113, 37546173], [37559763, 37559877], [37563620, 37563692], [37569125, 37569172], [37569561, 37569733], [37573371, 37573504]]	[[37524078, 37524194], [37526650, 37526736], [37539711, 37539863], [37546113, 37546173], [37559763, 37559877], [37563620, 37563692], [37569125, 37569172], [37569561, 37569733], [37573371, 37573437]]

Promoter

Chrom	Start	End	Description
chr13	37573432	37573502	CAGE_peak_1_at_ALG5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I036965	36965384	36967035	0.49	[{'connected_gene': 'SUPT20H', 'score': 15.41}, {'connected_gene': 'PIR51208', 'score': 0.34}, {'connected_gene': 'EIF4A1P5', 'score': 0.31}, {'connected_gene': 'ALG5', 'score': 0.29}]
chr13	GH13I037006	37006288	37008098	0.38	[{'connected_gene': 'SUPT20H', 'score': 27.64}, {'connected_gene': 'GC13P037009', 'score': 0.77}, {'connected_gene': 'EXOSC8', 'score': 0.44}, {'connected_gene': 'ALG5', 'score': 0.44}]
chr13	GH13I036978	36978971	36980045	0.2	[{'connected_gene': 'CSNK1A1L', 'score': 6.34}, {'connected_gene': 'PIR51208', 'score': 0.39}, {'connected_gene': 'ALG5', 'score': 0.34}, {'connected_gene': 'EIF4A1P5', 'score': 0.28}]
chr13	GH13I037746	37746881	37748058	0.66	[{'connected_gene': 'EXOSC8', 'score': 13.48}, {'connected_gene': 'ALG5', 'score': 11.35}, {'connected_gene': 'GC13P037774', 'score': 0.31}, {'connected_gene': 'GC13P037655', 'score': 0.16}, {'connected_gene': 'TRPC4', 'score': 0.13}]
chr13	GH13I036997	36997774	37002390	2.31	[{'connected_gene': 'EXOSC8', 'score': 572.94}, {'connected_gene': 'ALG5', 'score': 560.7}, {'connected_gene': 'SUPT20H', 'score': 40.33}, {'connected_gene': 'RFXAP', 'score': 27.66}, {'connected_gene': 'SPART-AS1', 'score': 12.17}, {'connected_gene': 'SMAD9', 'score': 9.94}, {'connected_gene': 'CSNK1A1L', 'score': 7.02}]