PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000474320	[[43597338, 43597870], [43639821, 43639873], [43643065, 43643139], [43652747, 43653013]]	None
ENST00000379221	[[43597338, 43597870], [43639821, 43639873], [43643065, 43643139], [43652747, 43652824], [43659903, 43659974], [43681313, 43683045]]	[[43597762, 43597870], [43639821, 43639873], [43643065, 43643139], [43652747, 43652824], [43659903, 43659974], [43681313, 43681384]]
NM_013238	[[43597361, 43597870], [43639821, 43639873], [43643065, 43643139], [43652747, 43652824], [43659903, 43659974], [43681313, 43683306]]	[[43597762, 43597870], [43639821, 43639873], [43643065, 43643139], [43652747, 43652824], [43659903, 43659974], [43681313, 43681384]]

Promoter

Chrom	Start	End	Description
chr13	43597269	43597290	CAGE_peak_5_at_DNAJC15_5end
chr13	43597504	43597523	CAGE_peak_2_at_DNAJC15_5end
chr13	43597664	43597675	CAGE_peak_3_at_DNAJC15_5end
chr13	43597714	43597774	CAGE_peak_1_at_DNAJC15_5end
chr13	43597839	43597846	CAGE_peak_4_at_DNAJC15_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I042989	42989838	42993855	2.05	[{'connected_gene': 'EPSTI1', 'score': 565.83}, {'connected_gene': 'DNAJC15', 'score': 9.66}, {'connected_gene': 'GC13P042964', 'score': 0.31}]
chr13	GH13I043036	43036801	43037000	0.2	[{'connected_gene': 'EPSTI1', 'score': 11.27}, {'connected_gene': 'GC13P043043', 'score': 0.44}, {'connected_gene': 'GC13P043024', 'score': 0.39}, {'connected_gene': 'DNAJC15', 'score': 0.39}]
chr13	GH13I043087	43087532	43088801	0.81	[{'connected_gene': 'EPSTI1', 'score': 15.34}, {'connected_gene': 'CCDC122', 'score': 10.07}, {'connected_gene': 'LACC1', 'score': 10.07}, {'connected_gene': 'GC13P043094', 'score': 0.44}, {'connected_gene': 'GC13M043046', 'score': 0.26}, {'connected_gene': 'DNAJC15', 'score': 0.21}]
chr13	GH13I043053	43053457	43062490	1.19	[{'connected_gene': 'DNAJC15', 'score': 43.8}, {'connected_gene': 'EPSTI1', 'score': 20.07}, {'connected_gene': 'CCDC122', 'score': 4.68}, {'connected_gene': 'GC13M043046', 'score': 0.39}, {'connected_gene': 'GC13P043094', 'score': 0.28}]
chr13	GH13I042995	42995801	42998233	1.22	[{'connected_gene': 'DNAJC15', 'score': 33.83}, {'connected_gene': 'EPSTI1', 'score': 25.0}, {'connected_gene': 'LOC105370179', 'score': 0.44}]
chr13	GH13I043021	43021820	43021966	0.38	[{'connected_gene': 'DNAJC15', 'score': 550.77}, {'connected_gene': 'EPSTI1', 'score': 12.16}, {'connected_gene': 'LOC105370179', 'score': 0.37}]
chr13	GH13I043076	43076713	43078287	0.31	[{'connected_gene': 'DNAJC15', 'score': 41.89}, {'connected_gene': 'EPSTI1', 'score': 11.17}, {'connected_gene': 'GC13P043094', 'score': 0.37}, {'connected_gene': 'GC13M043046', 'score': 0.29}]
chr13	GH13I043048	43048801	43050600	0.98	[{'connected_gene': 'DNAJC15', 'score': 45.45}, {'connected_gene': 'EPSTI1', 'score': 21.98}, {'connected_gene': 'GC13M043046', 'score': 0.77}, {'connected_gene': 'GC13P043094', 'score': 0.26}]
chr13	GH13I042967	42967315	42970177	1.04	[{'connected_gene': 'DNAJC15', 'score': 22.27}, {'connected_gene': 'EPSTI1', 'score': 12.62}, {'connected_gene': 'GC13P042964', 'score': 0.77}]
chr13	GH13I042980	42980453	42983237	0.66	[{'connected_gene': 'DNAJC15', 'score': 28.36}, {'connected_gene': 'EPSTI1', 'score': 7.11}, {'connected_gene': 'GC13P042964', 'score': 0.37}]
chr13	GH13I042975	42975533	42976483	0.2	[{'connected_gene': 'DNAJC15', 'score': 7.63}, {'connected_gene': 'GC13P042964', 'score': 0.39}, {'connected_gene': 'EPSTI1', 'score': 0.37}]
chr13	GH13I042984	42984594	42986567	0.83	[{'connected_gene': 'DNAJC15', 'score': 27.21}, {'connected_gene': 'EPSTI1', 'score': 0.44}, {'connected_gene': 'GC13P042964', 'score': 0.34}]
chr13	GH13I043022	43022532	43024814	1.92	[{'connected_gene': 'DNAJC15', 'score': 628.86}, {'connected_gene': 'GC13P043024', 'score': 550.77}, {'connected_gene': 'EPSTI1', 'score': 16.91}]
chr13	GH13I043070	43070531	43073489	0.56	[{'connected_gene': 'DNAJC15', 'score': 43.81}, {'connected_gene': 'CCDC122', 'score': 4.82}, {'connected_gene': 'GC13P043094', 'score': 0.34}, {'connected_gene': 'GC13M043046', 'score': 0.31}]
chr13	GH13I043006	43006397	43007738	0.43	[{'connected_gene': 'DNAJC15', 'score': 8.43}, {'connected_gene': 'LOC105370179', 'score': 0.77}]
chr13	GH13I043126	43126753	43128935	0.8	[{'connected_gene': 'DNAJC15', 'score': 4.38}, {'connected_gene': 'LINC00400', 'score': 0.39}, {'connected_gene': 'GC13P043148', 'score': 0.34}, {'connected_gene': 'GC13P043094', 'score': 0.29}]
chr13	GH13I043121	43121733	43123500	0.43	[{'connected_gene': 'DNAJC15', 'score': 5.57}, {'connected_gene': 'LINC00400', 'score': 0.44}, {'connected_gene': 'GC13P043094', 'score': 0.31}, {'connected_gene': 'GC13P043148', 'score': 0.31}]
chr13	GH13I043005	43005545	43005734	0.56	[{'connected_gene': 'LOC105370179', 'score': 0.77}, {'connected_gene': 'DNAJC15', 'score': 0.37}]
chr13	GH13I043007	43006012	43006360	0.38	[{'connected_gene': 'LOC105370179', 'score': 0.77}, {'connected_gene': 'DNAJC15', 'score': 0.37}]
chr13	GH13I043002	43002395	43004012	0.2	[{'connected_gene': 'LOC105370179', 'score': 550.77}, {'connected_gene': 'DNAJC15', 'score': 10.53}]
chr13	GH13I043004	43004945	43004974	0.38	[{'connected_gene': 'LOC105370179', 'score': 0.77}, {'connected_gene': 'DNAJC15', 'score': 0.37}]
chr13	GH13I043043	43043135	43046399	1.23	[{'connected_gene': 'GC13M043046', 'score': 550.77}, {'connected_gene': 'GC13P043043', 'score': 550.77}, {'connected_gene': 'DNAJC15', 'score': 43.98}, {'connected_gene': 'EPSTI1', 'score': 16.35}, {'connected_gene': 'TNFSF11', 'score': 1.37}]
chr13	GH13I043039	43039687	43042929	0.76	[{'connected_gene': 'GC13P043043', 'score': 550.77}, {'connected_gene': 'DNAJC15', 'score': 60.77}, {'connected_gene': 'EPSTI1', 'score': 16.38}, {'connected_gene': 'GC13P043024', 'score': 0.37}]
chr13	GH13I042965	42965019	42965825	0.2	[{'connected_gene': 'GC13P042964', 'score': 550.77}, {'connected_gene': 'DNAJC15', 'score': 6.83}, {'connected_gene': 'EPSTI1', 'score': 0.31}]