PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000552377	[[82617459, 82617473], [82702029, 82702094], [82750738, 82751048], [82752001, 82752175]]	[[82617459, 82617473], [82702029, 82702094], [82750738, 82751048], [82752001, 82752155]]
ENST00000256151	[[82746084, 82747091], [82748273, 82748373], [82750738, 82751048], [82752001, 82752567]]	[[82746929, 82747091], [82748273, 82748373], [82750738, 82751048], [82752001, 82752155]]
ENST00000550589	[[82746617, 82747091], [82748273, 82749900]]	None
ENST00000548126	[[82746625, 82747091], [82748273, 82748373], [82750738, 82751048], [82752457, 82752565]]	None
ENST00000547758	[[82750622, 82751048], [82752457, 82752584]]	None
ENST00000552606	[[82750635, 82751048], [82752001, 82752188]]	None
ENST00000552412	[[82750893, 82751110], [82752001, 82752071]]	None
NM_014167	[[82746082, 82747091], [82748273, 82748373], [82750738, 82751048], [82752001, 82752199]]	[[82746929, 82747091], [82748273, 82748373], [82750738, 82751048], [82752001, 82752155]]
NR_033192	[[82746082, 82747091], [82748273, 82748373], [82750738, 82751048], [82752457, 82752584]]	None

Promoter

Chrom	Start	End	Description
chr12	82752159	82752193	CAGE_peak_1_at_CCDC59_5end
chr12	82752523	82752564	CAGE_peak_2_at_CCDC59_5end
chr12	82752565	82752579	CAGE_peak_3_at_CCDC59_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I081942	81942197	81943043	1.12	[{'connected_gene': 'PPFIA2', 'score': 4.85}, {'connected_gene': 'CCDC59', 'score': 1.56}, {'connected_gene': 'LINC02426', 'score': 0.39}, {'connected_gene': 'VN1R57P', 'score': 0.19}]
chr12	GH12I081955	81955561	81956121	0.7	[{'connected_gene': 'PPFIA2', 'score': 5.32}, {'connected_gene': 'CCDC59', 'score': 1.3}, {'connected_gene': 'LINC02426', 'score': 0.77}, {'connected_gene': 'ENSG00000258193', 'score': 0.26}]
chr12	GH12I081949	81949542	81950400	0.57	[{'connected_gene': 'PPFIA2', 'score': 5.32}, {'connected_gene': 'TMTC2', 'score': 4.08}, {'connected_gene': 'CCDC59', 'score': 1.87}, {'connected_gene': 'LINC02426', 'score': 0.77}, {'connected_gene': 'VN1R57P', 'score': 0.18}]
chr12	GH12I082861	82861808	82864714	0.87	[{'connected_gene': 'METTL25', 'score': 13.79}, {'connected_gene': 'CCDC59', 'score': 11.98}, {'connected_gene': 'PIR32311', 'score': 0.28}, {'connected_gene': 'PIR35845', 'score': 0.13}, {'connected_gene': 'TMTC2', 'score': 0.1}]
chr12	GH12I082357	82357059	82359827	2.14	[{'connected_gene': 'METTL25', 'score': 604.83}, {'connected_gene': 'CCDC59', 'score': 599.02}, {'connected_gene': 'PIR52845', 'score': 550.77}, {'connected_gene': 'ENSG00000257431', 'score': 10.47}]
chr12	GH12I081956	81956595	81956909	0.47	[{'connected_gene': 'CCDC59', 'score': 1.13}, {'connected_gene': 'LINC02426', 'score': 0.77}, {'connected_gene': 'ENSG00000258193', 'score': 0.26}]
chr12	GH12I082314	82314428	82314800	0.69	[{'connected_gene': 'LOC105369873', 'score': 0.44}, {'connected_gene': 'METTL25', 'score': 0.26}, {'connected_gene': 'CCDC59', 'score': 0.26}]
chr12	GH12I082329	82329457	82330079	0.43	[{'connected_gene': 'ENSG00000257431', 'score': 16.15}, {'connected_gene': 'LOC105369873', 'score': 0.34}, {'connected_gene': 'METTL25', 'score': 0.31}, {'connected_gene': 'CCDC59', 'score': 0.31}]