PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	Interaction detection method	Publication	Evidence
MIA2	5	MAGEB18	two hybrid	Rolland T (2014)	1
HTT	14	MAGEB18	two hybrid	Suter B (2013)	1
TP53	0	MAGEB18	two hybrid, two hybrid	Rual JF (2005), Lim J (2006)	2
GABPB1	0	MAGEB18	two hybrid, two hybrid	Rual JF (2005), Venkatesan K (2009)	2
HTT	14	TP53	pull down, affinity chromatography technology	Steffan JS (2000), Steffan JS (2000)	2
TNIP1	1	MAGEB18	two hybrid, affinity chromatography technology, two hybrid	Rual JF (2005), Rual JF (2005), Rolland T (2014)	3
LNX1	7	MAGEB18	two hybrid, affinity chromatography technology, affinity chromatography technology, pull down, pull down, two hybrid	Rual JF (2005), Doyle JM (2010), Doyle JM (2010), Doyle JM (2010), Doyle JM (2010), Rolland T (2014)	6
ATXN1	2	MAGEB18	two hybrid	Suter B (2013)	1
TRIM37	7	MAGEB18	two hybrid	Rual JF (2005)	1