PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000522422	[[95731930, 95732242], [95738558, 95738669], [95751640, 95751762], [95751872, 95752007]]	[[95732226, 95732242], [95738558, 95738669], [95751640, 95751762], [95751872, 95752007]]
ENST00000520774	[[95732102, 95732242], [95738558, 95738669], [95750596, 95750687], [95751640, 95751762], [95751872, 95751989]]	[[95732226, 95732242], [95738558, 95738669], [95750596, 95750604]]
ENST00000414645	[[95732127, 95732242], [95738558, 95738669], [95746857, 95746982], [95750596, 95750687], [95751640, 95751762], [95751872, 95752018], [95768263, 95768387], [95773927, 95774062], [95777410, 95777542], [95777938, 95778037], [95778839, 95778913], [95780622, 95780781], [95782679, 95782799], [95789893, 95790014], [95792586, 95792643], [95793311, 95793394], [95795897, 95796030], [95800121, 95800280], [95801973, 95806064]]	[[95732226, 95732242], [95738558, 95738669], [95746857, 95746982], [95750596, 95750687], [95751640, 95751762], [95751872, 95752018], [95768263, 95768387], [95773927, 95774062], [95777410, 95777542], [95777938, 95778037], [95778839, 95778913], [95780622, 95780781], [95782679, 95782799], [95789893, 95790014], [95792586, 95792643], [95793311, 95793394], [95795897, 95796030], [95800121, 95800280], [95801973, 95802138]]
ENST00000519353	[[95738623, 95738669], [95750596, 95750687], [95751640, 95751762], [95751872, 95751953]]	[[95738623, 95738669], [95750596, 95750687], [95751640, 95751762], [95751872, 95751953]]
ENST00000519176	[[95738629, 95738669], [95746857, 95746982], [95750596, 95750687], [95751640, 95751762], [95751872, 95752018], [95756712, 95757312]]	[[95738629, 95738669], [95746857, 95746982], [95750596, 95750687], [95751640, 95751762], [95751872, 95752018], [95756712, 95756761]]
ENST00000521525	[[95751747, 95751762], [95751872, 95752018], [95756570, 95757211]]	[[95751747, 95751762], [95751872, 95752018], [95756570, 95756613]]
ENST00000523020	[[95751877, 95752018], [95768263, 95768387], [95773927, 95774062], [95777938, 95778037], [95778839, 95778913], [95780622, 95780781], [95782679, 95782775]]	[[95751877, 95752018], [95768263, 95768387], [95773927, 95774062], [95777938, 95778037], [95778839, 95778913], [95780622, 95780781], [95782679, 95782775]]
ENST00000522669	[[95789905, 95790014], [95792586, 95792643], [95795897, 95796030], [95800121, 95800280], [95801973, 95802063]]	[[95789905, 95790014], [95792586, 95792643], [95795897, 95795957]]
NM_181787	[[95732102, 95732242], [95738558, 95738669], [95746857, 95746982], [95750596, 95750687], [95751640, 95751762], [95751872, 95752018], [95768263, 95768387], [95773927, 95774062], [95777410, 95777542], [95777938, 95778037], [95778839, 95778913], [95780622, 95780781], [95782679, 95782799], [95789893, 95790014], [95792586, 95792643], [95793311, 95793394], [95795897, 95796030], [95800121, 95800280], [95801973, 95806076]]	[[95732226, 95732242], [95738558, 95738669], [95746857, 95746982], [95750596, 95750687], [95751640, 95751762], [95751872, 95752018], [95768263, 95768387], [95773927, 95774062], [95777410, 95777542], [95777938, 95778037], [95778839, 95778913], [95780622, 95780781], [95782679, 95782799], [95789893, 95790014], [95792586, 95792643], [95793311, 95793394], [95795897, 95796030], [95800121, 95800280], [95801973, 95802138]]

Promoter

Chrom	Start	End	Description
chr8	95731904	95731954	CAGE_peak_3_at_DPY19L4_5end
chr8	95732095	95732159	CAGE_peak_1_at_DPY19L4_5end
chr8	95732166	95732186	CAGE_peak_2_at_DPY19L4_5end
chr8	95802932	95802951	CAGE_peak_4_at_DPY19L4_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I095094	95094788	95096555	0.63	[{'connected_gene': 'PLEKHF2', 'score': 12.78}, {'connected_gene': 'RNU6-1209P', 'score': 11.58}, {'connected_gene': 'DPY19L4', 'score': 4.6}, {'connected_gene': 'ENSG00000254248', 'score': 0.44}, {'connected_gene': 'MIR3150BHG', 'score': 0.29}, {'connected_gene': 'NDUFAF6', 'score': 0.08}]
chr8	GH08I094690	94690877	94694117	0.78	[{'connected_gene': 'ESRP1', 'score': 11.51}, {'connected_gene': 'DPY19L4', 'score': 6.19}, {'connected_gene': 'RPS15AP26', 'score': 0.77}, {'connected_gene': 'GC08P094705', 'score': 0.39}]
chr8	GH08I093915	93915458	93919263	2.22	[{'connected_gene': 'PDP1', 'score': 565.38}, {'connected_gene': 'MIR378D2', 'score': 550.77}, {'connected_gene': 'ENSG00000264448', 'score': 550.77}, {'connected_gene': 'LINC00535', 'score': 24.11}, {'connected_gene': 'FAM92A', 'score': 21.43}, {'connected_gene': 'ENSG00000253854', 'score': 19.34}, {'connected_gene': 'RPL34P18', 'score': 17.89}, {'connected_gene': 'TMEM67', 'score': 11.69}, {'connected_gene': 'DPY19L4', 'score': 11.28}, {'connected_gene': 'PSMA2P2', 'score': 0.31}]
chr8	GH08I094760	94760104	94761382	0.75	[{'connected_gene': 'DPY19L4', 'score': 5.12}, {'connected_gene': 'INTS8', 'score': 4.94}, {'connected_gene': 'ENSG00000254307', 'score': 0.29}]
chr8	GH08I094718	94718637	94721525	2.14	[{'connected_gene': 'DPY19L4', 'score': 556.16}, {'connected_gene': 'VIRMA', 'score': 75.65}, {'connected_gene': 'RBM12B', 'score': 50.15}, {'connected_gene': 'INTS8', 'score': 49.38}, {'connected_gene': 'C8orf37', 'score': 39.47}, {'connected_gene': 'NDUFAF6', 'score': 13.25}, {'connected_gene': 'RPL34P18', 'score': 11.26}, {'connected_gene': 'TMEM67', 'score': 10.99}, {'connected_gene': 'ENSG00000272509', 'score': 10.57}, {'connected_gene': 'ESRP1', 'score': 10.12}, {'connected_gene': 'ENSG00000253704', 'score': 9.77}, {'connected_gene': 'ENSG00000254307', 'score': 0.19}]
chr8	GH08I094748	94748866	94749581	0.83	[{'connected_gene': 'DPY19L4', 'score': 5.24}, {'connected_gene': 'ENSG00000254307', 'score': 0.26}]
chr8	GH08I094774	94774037	94774432	0.26	[{'connected_gene': 'RAD54B', 'score': 1.73}, {'connected_gene': 'VIRMA', 'score': 1.3}, {'connected_gene': 'ENSG00000254307', 'score': 0.37}, {'connected_gene': 'DPY19L4', 'score': 0.23}]
chr8	GH08I093974	93974253	93974402	0.56	[{'connected_gene': 'ENSG00000275386', 'score': 550.77}, {'connected_gene': 'RPL34P18', 'score': 17.48}, {'connected_gene': 'VIRMA', 'score': 12.15}, {'connected_gene': 'ENSG00000253854', 'score': 11.51}, {'connected_gene': 'INTS8', 'score': 10.34}, {'connected_gene': 'TMEM67', 'score': 9.95}, {'connected_gene': 'DPY19L4', 'score': 9.72}]