PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000520584	[[144328990, 144329919], [144331859, 144333510], [144335057, 144335761]]	[[144332013, 144332610]]
ENST00000330701	[[144329097, 144329312], [144331859, 144333510], [144341944, 144344875]]	[[144332013, 144332610]]
ENST00000522233	[[144329100, 144329312], [144330324, 144330660]]	None
ENST00000517702	[[144331310, 144331669], [144331859, 144331926]]	None
NM_001271156	[[144328990, 144329919], [144331859, 144333510], [144335057, 144335761]]	[[144332010, 144332610]]
NM_173832	[[144329097, 144329312], [144331859, 144333510], [144341944, 144344875]]	[[144332010, 144332610]]

Promoter

Chrom	Start	End	Description
chr8	144329092	144329140	CAGE_peak_1_at_ZFP41_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I143231	143231671	143231820	0.68	[{'connected_gene': 'ZNF623', 'score': 14.06}, {'connected_gene': 'AK3P2', 'score': 10.84}, {'connected_gene': 'ZFP41', 'score': 0.37}, {'connected_gene': 'GC08P143216', 'score': 0.37}]
chr8	GH08I143131	143131124	143131293	0.71	[{'connected_gene': 'LY6H', 'score': 12.22}, {'connected_gene': 'ZFP41', 'score': 12.11}, {'connected_gene': 'LY6L', 'score': 0.23}]
chr8	GH08I143217	143217985	143221761	1.49	[{'connected_gene': 'GPIHBP1', 'score': 14.54}, {'connected_gene': 'TOP1MT', 'score': 5.12}, {'connected_gene': 'LY6H', 'score': 2.15}, {'connected_gene': 'MAFA', 'score': 1.48}, {'connected_gene': 'GC08P143216', 'score': 0.77}, {'connected_gene': 'ZFP41', 'score': 0.31}]
chr8	GH08I143223	143223047	143224059	0.31	[{'connected_gene': 'GPIHBP1', 'score': 6.06}, {'connected_gene': 'MINCR', 'score': 4.48}, {'connected_gene': 'GC08P143216', 'score': 0.44}, {'connected_gene': 'ZFP41', 'score': 0.34}]
chr8	GH08I143128	143128804	143128953	0.2	[{'connected_gene': 'ZFP41', 'score': 12.21}, {'connected_gene': 'LY6H', 'score': 12.14}, {'connected_gene': 'ENSG00000243328', 'score': 6.44}, {'connected_gene': 'LY6L', 'score': 0.25}]
chr8	GH08I143595	143595367	143600496	2.09	[{'connected_gene': 'EEF1D', 'score': 573.94}, {'connected_gene': 'TIGD5', 'score': 561.7}, {'connected_gene': 'PIR45575', 'score': 550.77}, {'connected_gene': 'NAPRT', 'score': 59.93}, {'connected_gene': 'CPSF1', 'score': 52.15}, {'connected_gene': 'ZNF623', 'score': 41.49}, {'connected_gene': 'VPS28', 'score': 34.43}, {'connected_gene': 'JRK', 'score': 34.42}, {'connected_gene': 'LOC105375803', 'score': 23.89}, {'connected_gene': 'GPAA1', 'score': 23.87}, {'connected_gene': 'ZNF696', 'score': 22.61}, {'connected_gene': 'ZFP41', 'score': 20.76}, {'connected_gene': 'ENSG00000255050', 'score': 20.76}, {'connected_gene': 'LRRC14', 'score': 18.96}, {'connected_gene': 'SHARPIN', 'score': 17.26}, {'connected_gene': 'GSDMD', 'score': 14.99}, {'connected_gene': 'HSF1', 'score': 13.54}, {'connected_gene': 'PARP10', 'score': 12.18}, {'connected_gene': 'ADCK5', 'score': 11.17}, {'connected_gene': 'ZNF707', 'score': 11.02}, {'connected_gene': 'AK3P2', 'score': 10.78}, {'connected_gene': 'LOC105375798', 'score': 10.23}, {'connected_gene': 'TSSK5P', 'score': 10.1}, {'connected_gene': 'FBXL6', 'score': 9.94}]
chr8	GH08I143275	143275808	143282340	2.12	[{'connected_gene': 'MINCR', 'score': 30.32}, {'connected_gene': 'ZNF623', 'score': 23.03}, {'connected_gene': 'GPAA1', 'score': 21.9}, {'connected_gene': 'PARP10', 'score': 21.24}, {'connected_gene': 'ENSG00000255050', 'score': 19.67}, {'connected_gene': 'ZNF707', 'score': 17.22}, {'connected_gene': 'ZFP41', 'score': 13.95}, {'connected_gene': 'EEF1D', 'score': 13.15}, {'connected_gene': 'ZC3H3', 'score': 12.57}, {'connected_gene': 'RHPN1', 'score': 11.44}, {'connected_gene': 'SHARPIN', 'score': 10.36}, {'connected_gene': 'FAM83H-AS1', 'score': 8.13}, {'connected_gene': 'TOP1MT', 'score': 5.92}, {'connected_gene': 'TIGD5', 'score': 3.54}, {'connected_gene': 'GLI4', 'score': 3.12}, {'connected_gene': 'LY6E', 'score': 2.33}, {'connected_gene': 'PYCR3', 'score': 2.09}, {'connected_gene': 'NAPRT', 'score': 1.9}, {'connected_gene': 'TSTA3', 'score': 1.86}, {'connected_gene': 'ENSG00000264668', 'score': 0.29}]
chr8	GH08I143289	143289002	143292368	2.28	[{'connected_gene': 'ENSG00000272172', 'score': 550.77}, {'connected_gene': 'ZNF696', 'score': 550.77}, {'connected_gene': 'SHARPIN', 'score': 34.16}, {'connected_gene': 'MINCR', 'score': 28.75}, {'connected_gene': 'BREA2', 'score': 19.65}, {'connected_gene': 'TOP1MT', 'score': 14.72}, {'connected_gene': 'ZNF623', 'score': 13.97}, {'connected_gene': 'ZFP41', 'score': 11.99}, {'connected_gene': 'PARP10', 'score': 10.84}, {'connected_gene': 'GPAA1', 'score': 10.65}, {'connected_gene': 'ZC3H3', 'score': 10.46}, {'connected_gene': 'ENSG00000255050', 'score': 9.82}, {'connected_gene': 'RHPN1', 'score': 6.31}, {'connected_gene': 'GC08M143337', 'score': 0.25}]
chr8	GH08I143245	143245451	143248231	1.98	[{'connected_gene': 'ENSG00000264668', 'score': 550.77}, {'connected_gene': 'ZFP41', 'score': 550.77}, {'connected_gene': 'MINCR', 'score': 20.81}, {'connected_gene': 'SHARPIN', 'score': 17.25}, {'connected_gene': 'ZNF707', 'score': 10.9}, {'connected_gene': 'LY6K', 'score': 9.87}, {'connected_gene': 'GLI4', 'score': 7.73}, {'connected_gene': 'FAM83H-AS1', 'score': 6.96}, {'connected_gene': 'TOP1MT', 'score': 5.82}]
chr8	GH08I143261	143261043	143263215	0.31	[{'connected_gene': 'PIR32117', 'score': 550.77}, {'connected_gene': 'GC08P143262', 'score': 550.77}, {'connected_gene': 'MINCR', 'score': 29.16}, {'connected_gene': 'ZFP41', 'score': 11.57}, {'connected_gene': 'FAM83H-AS1', 'score': 7.54}, {'connected_gene': 'RHPN1', 'score': 5.96}, {'connected_gene': 'TOP1MT', 'score': 4.53}, {'connected_gene': 'PIR58179', 'score': 0.77}, {'connected_gene': 'ENSG00000264668', 'score': 0.37}]