PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000534941	[[155480400, 155481707], [155485297, 155485458], [155493489, 155493637], [155520320, 155520380], [155523385, 155523512], [155523927, 155524055]]	[[155481305, 155481707], [155485297, 155485458], [155493489, 155493637], [155520320, 155520365]]
ENST00000482061	[[155480405, 155481707], [155485297, 155485458], [155493489, 155493637], [155520320, 155520380], [155523385, 155523512], [155523927, 155524055]]	[[155493578, 155493637], [155520320, 155520380], [155523385, 155523512], [155523927, 155524041]]
ENST00000340171	[[155480405, 155481707], [155485297, 155485458], [155493489, 155493637], [155520320, 155520380], [155523927, 155524140]]	[[155481305, 155481707], [155485297, 155485458], [155493489, 155493637], [155520320, 155520380], [155523927, 155524041]]
ENST00000465810	[[155481316, 155481707], [155485297, 155485458], [155520320, 155520380], [155523927, 155524048]]	[[155485416, 155485458], [155520320, 155520380], [155523927, 155524041]]
ENST00000486435	[[155481575, 155481707], [155485297, 155485458], [155493489, 155493637], [155520320, 155520380], [155521839, 155521962], [155523385, 155523512], [155523927, 155524040]]	[[155521855, 155521962], [155523385, 155523512], [155523927, 155524040]]
NM_173657	[[155480400, 155481707], [155485297, 155485458], [155493489, 155493637], [155520320, 155520380], [155523385, 155523512], [155523927, 155524076]]	[[155481305, 155481707], [155485297, 155485458], [155493489, 155493637], [155520320, 155520365]]
NM_001308229	[[155480400, 155481707], [155485297, 155485458], [155493489, 155493637], [155520320, 155520380], [155523927, 155524076]]	[[155481305, 155481707], [155485297, 155485458], [155493489, 155493637], [155520320, 155520380], [155523927, 155524041]]

Promoter

Chrom	Start	End	Description
chr3	155524049	155524086	CAGE_peak_1_at_C3orf33_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I155850	155850001	155850400	0.38	[{'connected_gene': 'SLC33A1', 'score': 0.77}, {'connected_gene': 'C3orf33', 'score': 0.26}]
chr3	GH03I155849	155849601	155849800	0.31	[{'connected_gene': 'SLC33A1', 'score': 8.59}, {'connected_gene': 'C3orf33', 'score': 0.26}]
chr3	GH03I155888	155888801	155891518	1.1	[{'connected_gene': 'SLC33A1', 'score': 12.09}, {'connected_gene': 'ENSG00000214919', 'score': 10.34}, {'connected_gene': 'PLCH1', 'score': 10.34}, {'connected_gene': 'GMPS', 'score': 6.25}, {'connected_gene': 'C3orf33', 'score': 6.04}, {'connected_gene': 'SETP14', 'score': 0.15}]
chr3	GH03I155851	155851600	155855617	2.14	[{'connected_gene': 'SLC33A1', 'score': 564.72}, {'connected_gene': 'LOC105374174', 'score': 550.77}, {'connected_gene': 'GMPS', 'score': 10.47}, {'connected_gene': 'C3orf33', 'score': 5.02}]
chr3	GH03I155869	155869373	155873196	2.02	[{'connected_gene': 'GMPS', 'score': 556.06}, {'connected_gene': 'C3orf33', 'score': 9.41}, {'connected_gene': 'PLCH1', 'score': 4.1}, {'connected_gene': 'SETP14', 'score': 0.13}]
chr3	GH03I155912	155912320	155913287	0.2	[{'connected_gene': 'C3orf33', 'score': 5.32}, {'connected_gene': 'GMPS', 'score': 0.26}, {'connected_gene': 'SETP14', 'score': 0.19}]
chr3	GH03I155959	155959735	155960797	0.2	[{'connected_gene': 'C3orf33', 'score': 17.03}, {'connected_gene': 'SETP14', 'score': 0.31}, {'connected_gene': 'GMPS', 'score': 0.16}]
chr3	GH03I155990	155990813	155991823	0.2	[{'connected_gene': 'C3orf33', 'score': 10.85}, {'connected_gene': 'VN2R1P', 'score': 10.69}, {'connected_gene': 'KCNAB1', 'score': 10.63}, {'connected_gene': 'GMPS', 'score': 5.79}, {'connected_gene': 'SETP14', 'score': 0.77}]
chr3	GH03I155804	155804492	155806901	2	[{'connected_gene': 'C3orf33', 'score': 559.53}, {'connected_gene': 'PLCH1', 'score': 5.93}, {'connected_gene': 'SLC33A1', 'score': 5.08}, {'connected_gene': 'RPL7AP24', 'score': 0.25}]
chr3	GH03I155747	155747598	155747761	0.38	[{'connected_gene': 'C3orf33', 'score': 11.7}, {'connected_gene': 'PLCH1', 'score': 0.77}, {'connected_gene': 'RPL7AP24', 'score': 0.39}]
chr3	GH03I155748	155747432	155747581	0.31	[{'connected_gene': 'C3orf33', 'score': 11.7}, {'connected_gene': 'PLCH1', 'score': 0.77}, {'connected_gene': 'RPL7AP24', 'score': 0.39}]
chr3	GH03I155743	155743654	155747256	1.87	[{'connected_gene': 'ENSG00000214919', 'score': 550.77}, {'connected_gene': 'PLCH1', 'score': 550.77}, {'connected_gene': 'C3orf33', 'score': 11.69}, {'connected_gene': 'SLC33A1', 'score': 6.03}, {'connected_gene': 'RPL7AP24', 'score': 0.37}]