PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000403205	[[40566368, 40566529], [40567269, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40575017]]	[[40567331, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40574581]]
ENST00000310898	[[40566368, 40566529], [40567269, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40573697], [40579776, 40579814]]	[[40567331, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40573697], [40579776, 40579814]]
ENST00000339296	[[40566375, 40566765], [40567269, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40579187]]	[[40567331, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40574581]]
ENST00000431278	[[40566388, 40566765], [40567269, 40567355], [40571699, 40571807], [40573520, 40575562]]	[[40573594, 40574581]]
ENST00000490457	[[40566473, 40566765], [40567269, 40567355], [40570809, 40570936], [40571699, 40571807], [40615873, 40616176]]	None
ENST00000462161	[[40566496, 40566529], [40567269, 40567355], [40570985, 40571066], [40571699, 40571807], [40573520, 40573748]]	None
ENST00000453351	[[40566906, 40566951], [40567269, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40573719]]	[[40567331, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40573719]]
ENST00000492098	[[40570778, 40570936], [40571699, 40571807], [40573520, 40574352]]	None
NM_001098414	[[40566368, 40566529], [40567269, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40581285]]	[[40567331, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40574581]]
NM_001287245	[[40566368, 40566765], [40567269, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40573697], [40579776, 40581285]]	[[40567331, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40573697], [40579776, 40579814]]
NM_198484	[[40566368, 40566765], [40567269, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40581285]]	[[40567331, 40567355], [40570809, 40570936], [40571699, 40571807], [40573520, 40574581]]

Promoter

Chrom	Start	End	Description
chr3	40566371	40566400	CAGE_peak_2_at_ZNF621_5end
chr3	40566428	40566480	CAGE_peak_1_at_ZNF621_5end
chr3	40566488	40566502	CAGE_peak_3_at_ZNF621_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I041173	41173436	41177704	0.38	[{'connected_gene': 'ZNF621', 'score': 5.44}, {'connected_gene': 'ENSG00000233919', 'score': 4.93}, {'connected_gene': 'MRPS31P1', 'score': 0.39}]
chr3	GH03I040523	40523852	40526057	2.05	[{'connected_gene': 'ZNF621', 'score': 550.77}, {'connected_gene': 'ZNF619', 'score': 10.84}, {'connected_gene': 'ENTPD3-AS1', 'score': 8.93}, {'connected_gene': 'GC03M040586', 'score': 0.21}]
chr3	GH03I041158	41158430	41160791	0.9	[{'connected_gene': 'ZNF619', 'score': 69.87}, {'connected_gene': 'CTNNB1', 'score': 51.23}, {'connected_gene': 'ZNF620', 'score': 11.36}, {'connected_gene': 'ZNF621', 'score': 9.99}, {'connected_gene': 'ENSG00000233919', 'score': 5.0}, {'connected_gene': 'LOC105377045', 'score': 0.15}]
chr3	GH03I040584	40584129	40585826	0.99	[{'connected_gene': 'ENTPD3-AS1', 'score': 10.97}, {'connected_gene': 'CTNNB1', 'score': 10.25}, {'connected_gene': 'GC03M040586', 'score': 0.77}, {'connected_gene': 'ZNF621', 'score': 0.21}]
chr3	GH03I040503	40503938	40507001	2.01	[{'connected_gene': 'ZNF620', 'score': 550.77}, {'connected_gene': 'ZNF619', 'score': 10.88}, {'connected_gene': 'RPL14', 'score': 10.65}, {'connected_gene': 'ENTPD3-AS1', 'score': 10.64}, {'connected_gene': 'ZNF621', 'score': 0.37}]
chr3	GH03I040580	40580650	40580779	0.69	[{'connected_gene': 'ZNF620', 'score': 12.03}, {'connected_gene': 'CTNNB1', 'score': 10.25}, {'connected_gene': 'GC03M040586', 'score': 0.44}, {'connected_gene': 'ZNF621', 'score': 0.22}]