PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

There is no corresponding data published yet, we will update it when such data available.

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Promoter

Chrom	Start	End	Description
chr20	62667340	62667354	CAGE_peak_8_at_LINC00176_5end
chr20	62667528	62667542	CAGE_peak_1_at_LINC00176_5end
chr20	62667589	62667598	CAGE_peak_9_at_LINC00176_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr20	GH20I064181	64181589	64183010	0.2	[{'connected_gene': 'MYT1', 'score': 12.61}, {'connected_gene': 'PCMTD2', 'score': 11.74}, {'connected_gene': 'C20orf204', 'score': 4.59}, {'connected_gene': 'GC20P064162', 'score': 0.37}, {'connected_gene': 'GC20P064163', 'score': 0.37}, {'connected_gene': 'GC20M064230', 'score': 0.22}]
chr20	GH20I063971	63971708	63975497	1.47	[{'connected_gene': 'MIR647', 'score': 46.91}, {'connected_gene': 'UCKL1', 'score': 33.33}, {'connected_gene': 'PRPF6', 'score': 24.43}, {'connected_gene': 'C20orf204', 'score': 20.33}, {'connected_gene': 'RTEL1', 'score': 18.23}, {'connected_gene': 'TNFRSF6B', 'score': 15.32}, {'connected_gene': 'ARFRP1', 'score': 12.99}, {'connected_gene': 'YTHDF1', 'score': 12.92}, {'connected_gene': 'ENSG00000237371', 'score': 12.38}, {'connected_gene': 'PCMTD2', 'score': 12.22}, {'connected_gene': 'ZBTB46', 'score': 11.77}, {'connected_gene': 'ZNF512B', 'score': 11.14}, {'connected_gene': 'GMEB2', 'score': 10.7}, {'connected_gene': 'ARFGAP1', 'score': 10.62}, {'connected_gene': 'CICP4', 'score': 10.37}, {'connected_gene': 'SAMD10', 'score': 5.89}]
chr20	GH20I064052	64052774	64058497	2.24	[{'connected_gene': 'TCEA2', 'score': 567.33}, {'connected_gene': 'ENSG00000237371', 'score': 555.66}, {'connected_gene': 'SOX18', 'score': 23.91}, {'connected_gene': 'RGS19', 'score': 20.27}, {'connected_gene': 'PRPF6', 'score': 15.89}, {'connected_gene': 'OPRL1', 'score': 12.11}, {'connected_gene': 'SAMD10', 'score': 11.29}, {'connected_gene': 'ZNF512B', 'score': 11.27}, {'connected_gene': 'C20orf204', 'score': 4.9}, {'connected_gene': 'UCKL1', 'score': 1.76}, {'connected_gene': 'PIR32513', 'score': 0.77}]
chr20	GH20I064038	64038128	64042801	1.76	[{'connected_gene': 'TCEA2', 'score': 550.77}, {'connected_gene': 'C20orf204', 'score': 18.09}, {'connected_gene': 'PRPF6', 'score': 10.93}]
chr20	GH20I064062	64062187	64067505	2.5	[{'connected_gene': 'TCEA2', 'score': 560.58}, {'connected_gene': 'RGS19', 'score': 40.62}, {'connected_gene': 'MIR647', 'score': 14.29}, {'connected_gene': 'UCKL1', 'score': 11.96}, {'connected_gene': 'C20orf204', 'score': 6.64}, {'connected_gene': 'ENSG00000237371', 'score': 0.44}, {'connected_gene': 'MIR6813', 'score': 0.39}]
chr20	GH20I063947	63947108	63953047	1.95	[{'connected_gene': 'UCKL1', 'score': 572.49}, {'connected_gene': 'MIR647', 'score': 15.4}, {'connected_gene': 'ENSG00000237371', 'score': 12.35}, {'connected_gene': 'GMEB2', 'score': 10.7}, {'connected_gene': 'CICP4', 'score': 10.36}, {'connected_gene': 'PRPF6', 'score': 8.79}, {'connected_gene': 'C20orf204', 'score': 5.53}, {'connected_gene': 'UCKL1-AS1', 'score': 0.77}, {'connected_gene': 'PIR37009', 'score': 0.44}]
chr20	GH20I064044	64044300	64045568	1.4	[{'connected_gene': 'SOX18', 'score': 12.78}, {'connected_gene': 'PRPF6', 'score': 9.66}, {'connected_gene': 'C20orf204', 'score': 7.94}, {'connected_gene': 'TCEA2', 'score': 5.96}, {'connected_gene': 'UCKL1', 'score': 1.8}, {'connected_gene': 'SLC2A4RG', 'score': 1.58}, {'connected_gene': 'GC20M064049', 'score': 0.77}]
chr20	GH20I064048	64048800	64051377	2.17	[{'connected_gene': 'SOX18', 'score': 550.77}, {'connected_gene': 'PIR32513', 'score': 550.77}, {'connected_gene': 'GC20M064049', 'score': 550.77}, {'connected_gene': 'PRPF6', 'score': 9.14}, {'connected_gene': 'C20orf204', 'score': 8.74}, {'connected_gene': 'TCEA2', 'score': 0.44}]
chr20	GH20I064012	64012410	64014073	0.64	[{'connected_gene': 'C20orf204', 'score': 20.29}, {'connected_gene': 'MIR647', 'score': 15.16}, {'connected_gene': 'UCKL1', 'score': 13.89}, {'connected_gene': 'ENSG00000237371', 'score': 12.47}, {'connected_gene': 'GMEB2', 'score': 10.7}, {'connected_gene': 'CICP4', 'score': 10.37}, {'connected_gene': 'PRPF6', 'score': 0.29}]
chr20	GH20I064034	64034176	64037877	0.98	[{'connected_gene': 'C20orf204', 'score': 564.4}, {'connected_gene': 'PRPF6', 'score': 9.55}, {'connected_gene': 'RGS19', 'score': 4.73}, {'connected_gene': 'TCEA2', 'score': 0.44}]
chr20	GH20I064024	64024328	64024517	1.09	[{'connected_gene': 'C20orf204', 'score': 0.44}, {'connected_gene': 'PRPF6', 'score': 0.26}]
chr20	GH20I064009	64009712	64011901	0.65	[{'connected_gene': 'C20orf204', 'score': 23.85}, {'connected_gene': 'PRPF6', 'score': 0.31}]
chr20	GH20I064025	64025308	64026127	0.82	[{'connected_gene': 'C20orf204', 'score': 16.59}, {'connected_gene': 'PRPF6', 'score': 0.26}]
chr20	GH20I063977	63977402	63982206	2.57	[{'connected_gene': 'PRPF6', 'score': 574.2}, {'connected_gene': 'SAMD10', 'score': 553.99}, {'connected_gene': 'C20orf204', 'score': 23.29}, {'connected_gene': 'GMEB2', 'score': 18.27}, {'connected_gene': 'CICP4', 'score': 12.1}, {'connected_gene': 'RTEL1', 'score': 10.43}, {'connected_gene': 'ZNF512B', 'score': 0.44}]
chr20	GH20I064076	64076110	64081018	2.23	[{'connected_gene': 'RGS19', 'score': 592.66}, {'connected_gene': 'OPRL1', 'score': 553.75}, {'connected_gene': 'MIR6813', 'score': 550.77}, {'connected_gene': 'C20orf204', 'score': 5.14}, {'connected_gene': 'PRPF6', 'score': 4.51}, {'connected_gene': 'GMEB2', 'score': 2.69}, {'connected_gene': 'LIME1', 'score': 2.06}, {'connected_gene': 'PCMTD2', 'score': 1.57}, {'connected_gene': 'ZGPAT', 'score': 1.5}]
chr20	GH20I063845	63845668	63848984	1.46	[{'connected_gene': 'C20orf181', 'score': 550.77}, {'connected_gene': 'MIR647', 'score': 59.15}, {'connected_gene': 'DIDO1', 'score': 52.34}, {'connected_gene': 'UCKL1', 'score': 47.8}, {'connected_gene': 'PCMTD2', 'score': 43.95}, {'connected_gene': 'TNFRSF6B', 'score': 39.23}, {'connected_gene': 'ZNF512B', 'score': 36.11}, {'connected_gene': 'RTEL1', 'score': 27.91}, {'connected_gene': 'YTHDF1', 'score': 13.99}, {'connected_gene': 'ENSG00000237371', 'score': 12.29}, {'connected_gene': 'ZBTB46-AS1', 'score': 11.72}, {'connected_gene': 'DNAJC5', 'score': 11.05}, {'connected_gene': 'FNDC11', 'score': 10.95}, {'connected_gene': 'GMEB2', 'score': 10.72}, {'connected_gene': 'PRPF6', 'score': 10.57}, {'connected_gene': 'C20orf204', 'score': 10.57}, {'connected_gene': 'ENSG00000268858', 'score': 10.39}, {'connected_gene': 'CICP4', 'score': 10.36}, {'connected_gene': 'TCEA2', 'score': 10.33}, {'connected_gene': 'ARFRP1', 'score': 10.3}, {'connected_gene': 'ZBTB46', 'score': 10.22}, {'connected_gene': 'GC20M063809', 'score': 0.77}]