PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000399875	[[17597188, 17601033], [17602141, 17602257]]	[[17600280, 17600952]]
ENST00000331437	[[17597189, 17602143]]	[[17600280, 17602017]]

Promoter

Chrom	Start	End	Description
chr22	17601758	17601792	CAGE_peak_3_at_CECR6_5end
chr22	17602160	17602175	CAGE_peak_2_at_CECR6_5end
chr22	17602200	17602265	CAGE_peak_1_at_CECR6_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr22	GH22I017562	17562177	17564500	1.85	[{'connected_gene': 'SLC25A18', 'score': 571.98}, {'connected_gene': 'GC22P017566', 'score': 550.77}, {'connected_gene': 'TPTEP1', 'score': 5.77}, {'connected_gene': 'BID', 'score': 4.67}, {'connected_gene': 'MICAL3', 'score': 2.5}, {'connected_gene': 'TMEM121B', 'score': 1.94}, {'connected_gene': 'LOC105372850', 'score': 0.44}]
chr22	GH22I017198	17198060	17200548	1.1	[{'connected_gene': 'ADA2', 'score': 76.71}, {'connected_gene': 'CECR3', 'score': 11.77}, {'connected_gene': 'CECR2', 'score': 11.41}, {'connected_gene': 'LINC01664', 'score': 11.26}, {'connected_gene': 'TMEM121B', 'score': 11.26}, {'connected_gene': 'GC22P017193', 'score': 0.44}, {'connected_gene': 'GC22M017211', 'score': 0.39}]
chr22	GH22I017470	17470722	17473618	0.38	[{'connected_gene': 'CECR2', 'score': 15.95}, {'connected_gene': 'CECR3', 'score': 11.04}, {'connected_gene': 'ADA2', 'score': 11.02}, {'connected_gene': 'LINC01664', 'score': 10.79}, {'connected_gene': 'TMEM121B', 'score': 10.79}, {'connected_gene': 'CLCP1', 'score': 0.25}, {'connected_gene': 'GC22M017518', 'score': 0.25}]
chr22	GH22I017148	17148787	17151700	0.49	[{'connected_gene': 'HDHD5', 'score': 10.62}, {'connected_gene': 'IL17RA', 'score': 7.97}, {'connected_gene': 'TMEM121B', 'score': 6.84}, {'connected_gene': 'HDHD5-AS1', 'score': 0.44}, {'connected_gene': 'GC22P017137', 'score': 0.37}]
chr22	GH22I017157	17157793	17160406	1.99	[{'connected_gene': 'HDHD5', 'score': 559.96}, {'connected_gene': 'HDHD5-AS1', 'score': 550.77}, {'connected_gene': 'LINC01664', 'score': 12.06}, {'connected_gene': 'TMEM121B', 'score': 12.06}, {'connected_gene': 'GC22P017137', 'score': 0.34}]
chr22	GH22I017115	17115541	17118856	0.72	[{'connected_gene': 'TMEM121B', 'score': 12.18}, {'connected_gene': 'IL17RA', 'score': 6.94}, {'connected_gene': 'GC22P017113', 'score': 0.77}]
chr22	GH22I017106	17106001	17107800	0.86	[{'connected_gene': 'IL17RA', 'score': 12.57}, {'connected_gene': 'TMEM121B', 'score': 5.16}, {'connected_gene': 'GC22P017113', 'score': 0.44}, {'connected_gene': 'RPL31P62', 'score': 0.39}]
chr22	GH22I017191	17191130	17191600	0.52	[{'connected_gene': 'RPL32P5', 'score': 550.77}, {'connected_gene': 'GC22P017193', 'score': 550.77}, {'connected_gene': 'ADA2', 'score': 11.83}, {'connected_gene': 'CECR3', 'score': 11.72}, {'connected_gene': 'CECR2', 'score': 11.42}, {'connected_gene': 'LINC01664', 'score': 11.21}, {'connected_gene': 'TMEM121B', 'score': 11.21}, {'connected_gene': 'HDHD5', 'score': 0.31}]
chr22	GH22I017194	17194153	17194687	0.31	[{'connected_gene': 'RPL32P5', 'score': 550.77}, {'connected_gene': 'GC22P017193', 'score': 550.77}, {'connected_gene': 'ADA2', 'score': 16.29}, {'connected_gene': 'CECR3', 'score': 11.72}, {'connected_gene': 'CECR2', 'score': 11.42}, {'connected_gene': 'LINC01664', 'score': 11.2}, {'connected_gene': 'TMEM121B', 'score': 11.2}, {'connected_gene': 'GC22M017211', 'score': 0.37}]
chr22	GH22I017077	17077104	17077926	0.58	[{'connected_gene': 'LINC01664', 'score': 11.67}, {'connected_gene': 'TMEM121B', 'score': 11.67}, {'connected_gene': 'ADA2', 'score': 10.46}, {'connected_gene': 'CECR3', 'score': 10.43}, {'connected_gene': 'ENSG00000273442', 'score': 0.77}, {'connected_gene': 'ENSG00000273203', 'score': 0.44}]
chr22	GH22I017152	17152846	17153452	0.2	[{'connected_gene': 'LINC01664', 'score': 12.08}, {'connected_gene': 'TMEM121B', 'score': 12.08}, {'connected_gene': 'IL17RA', 'score': 7.49}, {'connected_gene': 'HDHD5', 'score': 5.87}, {'connected_gene': 'HDHD5-AS1', 'score': 0.44}, {'connected_gene': 'GC22P017137', 'score': 0.37}]
chr22	GH22I017120	17120600	17122093	1.86	[{'connected_gene': 'LINC01664', 'score': 550.77}, {'connected_gene': 'TMEM121B', 'score': 550.77}, {'connected_gene': 'IL17RA', 'score': 15.75}, {'connected_gene': 'GC22P017113', 'score': 0.44}]
chr22	GH22I017121	17120431	17120580	0.54	[{'connected_gene': 'LINC01664', 'score': 550.77}, {'connected_gene': 'TMEM121B', 'score': 550.77}, {'connected_gene': 'IL17RA', 'score': 16.5}, {'connected_gene': 'GC22P017113', 'score': 0.44}]
chr22	GH22I017119	17119691	17119740	0.54	[{'connected_gene': 'LINC01664', 'score': 550.77}, {'connected_gene': 'TMEM121B', 'score': 550.77}, {'connected_gene': 'GC22P017113', 'score': 0.44}]
chr22	GH22I017090	17090176	17094362	0.59	[{'connected_gene': 'RPL31P62', 'score': 550.77}, {'connected_gene': 'LINC01664', 'score': 12.83}, {'connected_gene': 'TMEM121B', 'score': 12.83}, {'connected_gene': 'CECR7', 'score': 10.85}, {'connected_gene': 'ADA2', 'score': 10.75}, {'connected_gene': 'CECR3', 'score': 10.72}, {'connected_gene': 'IL17RA', 'score': 6.53}, {'connected_gene': 'TPTEP1', 'score': 6.01}, {'connected_gene': 'ENSG00000236890', 'score': 5.32}]
chr22	GH22I017076	17076201	17076600	0.4	[{'connected_gene': 'CECR7', 'score': 19.25}, {'connected_gene': 'TMEM121B', 'score': 11.67}, {'connected_gene': 'LINC01664', 'score': 11.66}, {'connected_gene': 'ADA2', 'score': 10.46}, {'connected_gene': 'CECR3', 'score': 10.43}, {'connected_gene': 'ENSG00000273442', 'score': 0.77}, {'connected_gene': 'ENSG00000273203', 'score': 0.44}]
chr22	GH22I017074	17074802	17076049	1.18	[{'connected_gene': 'CECR7', 'score': 19.25}, {'connected_gene': 'LINC01664', 'score': 11.66}, {'connected_gene': 'TMEM121B', 'score': 11.66}, {'connected_gene': 'ADA2', 'score': 10.46}, {'connected_gene': 'CECR3', 'score': 10.43}, {'connected_gene': 'ENSG00000273203', 'score': 0.44}, {'connected_gene': 'ENSG00000273442', 'score': 0.44}]