PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000373365	[[38643700, 38645159], [38649787, 38649877], [38650583, 38650651], [38652149, 38652290], [38654667, 38654750], [38670746, 38670917]]	[[38645070, 38645159], [38649787, 38649877], [38650583, 38650651], [38652149, 38652290], [38654667, 38654750], [38670746, 38670830]]
ENST00000470973	[[38643718, 38645159], [38649787, 38649877], [38650583, 38650991]]	None
NM_006708	[[38643700, 38645159], [38649787, 38649877], [38650583, 38650651], [38652149, 38652290], [38654667, 38654750], [38670746, 38670952]]	[[38645070, 38645159], [38649787, 38649877], [38650583, 38650651], [38652149, 38652290], [38654667, 38654750], [38670746, 38670830]]

Promoter

Chrom	Start	End	Description
chr6	38670845	38670895	CAGE_peak_2_at_GLO1_5end
chr6	38670897	38670930	CAGE_peak_1_at_GLO1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I039220	39220579	39222925	1.06	[{'connected_gene': 'KCNK5', 'score': 5.12}, {'connected_gene': 'GLO1', 'score': 4.71}, {'connected_gene': 'DAAM2', 'score': 4.27}, {'connected_gene': 'PIR34969', 'score': 0.18}, {'connected_gene': 'GC06M039593', 'score': 0.09}]
chr6	GH06I039195	39195508	39211835	1.31	[{'connected_gene': 'KCNK5', 'score': 4.75}, {'connected_gene': 'GLO1', 'score': 4.4}, {'connected_gene': 'PIR34969', 'score': 0.22}, {'connected_gene': 'GC06M039593', 'score': 0.08}]
chr6	GH06I038508	38508601	38510510	0.89	[{'connected_gene': 'SAYSD1', 'score': 13.81}, {'connected_gene': 'ANKRD18EP', 'score': 9.66}, {'connected_gene': 'GLO1', 'score': 6.15}, {'connected_gene': 'PIR44974', 'score': 0.34}, {'connected_gene': 'BTBD9-AS1', 'score': 0.29}, {'connected_gene': 'BTBD9', 'score': 0.12}]
chr6	GH06I039084	39084267	39085515	0.43	[{'connected_gene': 'GLP1R', 'score': 22.27}, {'connected_gene': 'SAYSD1', 'score': 21.68}, {'connected_gene': 'GLO1', 'score': 4.45}, {'connected_gene': 'LOC105375046', 'score': 0.44}, {'connected_gene': 'PIR34726', 'score': 0.37}, {'connected_gene': 'GC06M039564', 'score': 0.37}]
chr6	GH06I038754	38754828	38756670	0.7	[{'connected_gene': 'GLO1', 'score': 23.36}, {'connected_gene': 'DNAH8', 'score': 11.1}, {'connected_gene': 'ZRF1PS', 'score': 0.44}, {'connected_gene': 'RN7SL465P', 'score': 0.39}]
chr6	GH06I038770	38770520	38772014	0.49	[{'connected_gene': 'GLO1', 'score': 10.99}, {'connected_gene': 'ENSG00000212586', 'score': 10.36}, {'connected_gene': 'DNAH8', 'score': 4.76}, {'connected_gene': 'GC06P042402', 'score': 0.44}]
chr6	GH06I038875	38875918	38877350	0.42	[{'connected_gene': 'GLO1', 'score': 6.8}, {'connected_gene': 'BTBD9', 'score': 2.28}, {'connected_gene': 'GC06M038822', 'score': 0.23}, {'connected_gene': 'ENSG00000220076', 'score': 0.23}, {'connected_gene': 'DNAH8', 'score': 0.1}]
chr6	GH06I038673	38673353	38674252	0.69	[{'connected_gene': 'GLO1', 'score': 21.12}, {'connected_gene': 'BTBD9', 'score': 15.99}, {'connected_gene': 'GC06P042389', 'score': 0.44}]
chr6	GH06I038676	38676965	38677114	0.38	[{'connected_gene': 'GLO1', 'score': 12.29}, {'connected_gene': 'BTBD9', 'score': 10.71}, {'connected_gene': 'GC06P042389', 'score': 0.44}]
chr6	GH06I038701	38701801	38703814	2.07	[{'connected_gene': 'GLO1', 'score': 569.64}, {'connected_gene': 'ANKRD18EP', 'score': 66.67}, {'connected_gene': 'SAYSD1', 'score': 13.14}, {'connected_gene': 'BTBD9', 'score': 5.54}, {'connected_gene': 'GC06P042389', 'score': 0.29}]
chr6	GH06I038571	38571163	38573278	0.72	[{'connected_gene': 'BTBD9', 'score': 17.1}, {'connected_gene': 'GLO1', 'score': 9.01}, {'connected_gene': 'ENSG00000199938', 'score': 0.44}, {'connected_gene': 'LOC100128379', 'score': 0.37}]
chr6	GH06I038672	38672025	38672154	0.65	[{'connected_gene': 'BTBD9', 'score': 11.58}, {'connected_gene': 'GLO1', 'score': 11.21}, {'connected_gene': 'GC06P042389', 'score': 0.77}]
chr6	GH06I038638	38638232	38641073	2	[{'connected_gene': 'BTBD9', 'score': 557.06}, {'connected_gene': 'LOC105375044', 'score': 550.77}, {'connected_gene': 'GC06P041629', 'score': 550.77}, {'connected_gene': 'GLO1', 'score': 9.25}, {'connected_gene': 'GC06M038613', 'score': 0.77}, {'connected_gene': 'PIR46862', 'score': 0.37}]
chr6	GH06I038688	38688524	38689327	0.59	[{'connected_gene': 'BTBD9', 'score': 10.64}, {'connected_gene': 'BTBD9-AS1', 'score': 9.33}, {'connected_gene': 'GLO1', 'score': 7.4}, {'connected_gene': 'GC06P042389', 'score': 0.34}]
chr6	GH06I038795	38795707	38796492	0.91	[{'connected_gene': 'ENSG00000212586', 'score': 12.06}, {'connected_gene': 'GLO1', 'score': 10.9}, {'connected_gene': 'GC06P042402', 'score': 0.29}, {'connected_gene': 'DNAH8', 'score': 0.18}]
chr6	GH06I038776	38776494	38776614	0.43	[{'connected_gene': 'ENSG00000212586', 'score': 10.88}, {'connected_gene': 'GLO1', 'score': 9.6}, {'connected_gene': 'GC06P042402', 'score': 0.39}, {'connected_gene': 'DNAH8', 'score': 0.21}]
chr6	GH06I038796	38796645	38797884	0.92	[{'connected_gene': 'ENSG00000212586', 'score': 12.88}, {'connected_gene': 'DNAH8', 'score': 11.36}, {'connected_gene': 'GLO1', 'score': 4.86}, {'connected_gene': 'GC06P042402', 'score': 0.29}]
chr6	GH06I038714	38714801	38715600	0.93	[{'connected_gene': 'ENSG00000236355', 'score': 550.77}, {'connected_gene': 'DNAH8', 'score': 550.77}, {'connected_gene': 'GLO1', 'score': 5.68}]
chr6	GH06I038713	38713383	38714519	0.49	[{'connected_gene': 'ENSG00000236355', 'score': 550.77}, {'connected_gene': 'DNAH8', 'score': 550.77}, {'connected_gene': 'GLO1', 'score': 13.31}]