PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000261637	[[101673886, 101674105], [101674893, 101674974], [101679347, 101679414], [101679526, 101679659], [101680098, 101680287], [101682737, 101682819], [101683914, 101684052], [101684510, 101684666], [101685519, 101685666], [101685747, 101685882], [101686945, 101687023], [101689257, 101689436], [101693459, 101693615], [101693750, 101693839], [101696225, 101696331], [101699692, 101699843], [101700476, 101700539], [101701962, 101702121], [101703540, 101703617], [101705496, 101705576], [101705813, 101706054], [101711255, 101711441], [101713322, 101713413], [101714629, 101714715], [101715281, 101715407], [101720858, 101721025], [101723018, 101723227], [101727078, 101727222], [101728202, 101728282], [101731828, 101732055], [101732590, 101732735], [101734300, 101734388], [101736223, 101736367], [101736564, 101736615], [101736718, 101736871], [101738372, 101738528], [101739331, 101739472], [101740228, 101740366], [101745832, 101745972], [101746824, 101746907], [101748609, 101748896], [101750331, 101750471], [101750703, 101750860], [101755739, 101755838], [101757353, 101757521], [101759236, 101759403], [101760335, 101760477], [101761637, 101761754], [101763498, 101763669], [101764209, 101764341], [101764835, 101764946], [101766661, 101766741], [101767178, 101767248], [101767362, 101767545], [101768585, 101768717], [101769401, 101769534], [101773148, 101773336], [101774917, 101774989], [101776818, 101777091], [101777320, 101777447], [101779360, 101779506], [101779745, 101780394]]	[[101674060, 101674105], [101674893, 101674974], [101679347, 101679414], [101679526, 101679659], [101680098, 101680287], [101682737, 101682819], [101683914, 101684052], [101684510, 101684666], [101685519, 101685666], [101685747, 101685882], [101686945, 101687023], [101689257, 101689436], [101693459, 101693615], [101693750, 101693839], [101696225, 101696331], [101699692, 101699843], [101700476, 101700539], [101701962, 101702121], [101703540, 101703617], [101705496, 101705576], [101705813, 101706054], [101711255, 101711441], [101713322, 101713413], [101714629, 101714715], [101715281, 101715407], [101720858, 101721025], [101723018, 101723227], [101727078, 101727222], [101728202, 101728282], [101731828, 101732055], [101732590, 101732735], [101734300, 101734388], [101736223, 101736367], [101736564, 101736615], [101736718, 101736871], [101738372, 101738528], [101739331, 101739472], [101740228, 101740366], [101745832, 101745972], [101746824, 101746907], [101748609, 101748896], [101750331, 101750471], [101750703, 101750860], [101755739, 101755838], [101757353, 101757521], [101759236, 101759403], [101760335, 101760477], [101761637, 101761754], [101763498, 101763669], [101764209, 101764341], [101764835, 101764946], [101766661, 101766741], [101767178, 101767248], [101767362, 101767545], [101768585, 101768717], [101769401, 101769534], [101773148, 101773336], [101774917, 101774989], [101776818, 101777091], [101777320, 101777447], [101779360, 101779506], [101779745, 101779901]]
ENST00000551825	[[101673905, 101674105], [101674893, 101674974], [101679347, 101679414], [101679526, 101679659], [101680098, 101680287], [101682737, 101682819], [101683914, 101684052], [101684510, 101685205]]	None
ENST00000551998	[[101683680, 101684052], [101684510, 101684739]]	None
ENST00000551345	[[101720632, 101721025], [101723018, 101723123]]	None
NM_014503	[[101673904, 101674105], [101674893, 101674974], [101679347, 101679414], [101679526, 101679659], [101680098, 101680287], [101682737, 101682819], [101683914, 101684052], [101684510, 101684666], [101685519, 101685666], [101685747, 101685882], [101686945, 101687023], [101689257, 101689436], [101693459, 101693615], [101693750, 101693839], [101696225, 101696331], [101699692, 101699843], [101700476, 101700539], [101701962, 101702121], [101703540, 101703617], [101705496, 101705576], [101705813, 101706054], [101711255, 101711441], [101713322, 101713413], [101714629, 101714715], [101715281, 101715407], [101720858, 101721025], [101723018, 101723227], [101727078, 101727222], [101728202, 101728282], [101731828, 101732055], [101732590, 101732735], [101734300, 101734388], [101736223, 101736367], [101736564, 101736615], [101736718, 101736871], [101738372, 101738528], [101739331, 101739472], [101740228, 101740366], [101745832, 101745972], [101746824, 101746907], [101748609, 101748896], [101750331, 101750471], [101750703, 101750860], [101755739, 101755838], [101757353, 101757521], [101759236, 101759403], [101760335, 101760477], [101761637, 101761754], [101763498, 101763669], [101764209, 101764341], [101764835, 101764946], [101766661, 101766741], [101767178, 101767248], [101767362, 101767545], [101768585, 101768717], [101769401, 101769534], [101773148, 101773336], [101774917, 101774989], [101776818, 101777091], [101777320, 101777447], [101779360, 101779506], [101779745, 101780397]]	[[101674060, 101674105], [101674893, 101674974], [101679347, 101679414], [101679526, 101679659], [101680098, 101680287], [101682737, 101682819], [101683914, 101684052], [101684510, 101684666], [101685519, 101685666], [101685747, 101685882], [101686945, 101687023], [101689257, 101689436], [101693459, 101693615], [101693750, 101693839], [101696225, 101696331], [101699692, 101699843], [101700476, 101700539], [101701962, 101702121], [101703540, 101703617], [101705496, 101705576], [101705813, 101706054], [101711255, 101711441], [101713322, 101713413], [101714629, 101714715], [101715281, 101715407], [101720858, 101721025], [101723018, 101723227], [101727078, 101727222], [101728202, 101728282], [101731828, 101732055], [101732590, 101732735], [101734300, 101734388], [101736223, 101736367], [101736564, 101736615], [101736718, 101736871], [101738372, 101738528], [101739331, 101739472], [101740228, 101740366], [101745832, 101745972], [101746824, 101746907], [101748609, 101748896], [101750331, 101750471], [101750703, 101750860], [101755739, 101755838], [101757353, 101757521], [101759236, 101759403], [101760335, 101760477], [101761637, 101761754], [101763498, 101763669], [101764209, 101764341], [101764835, 101764946], [101766661, 101766741], [101767178, 101767248], [101767362, 101767545], [101768585, 101768717], [101769401, 101769534], [101773148, 101773336], [101774917, 101774989], [101776818, 101777091], [101777320, 101777447], [101779360, 101779506], [101779745, 101779901]]

Promoter

Chrom	Start	End	Description
chr12	101673872	101673912	CAGE_peak_1_at_UTP20_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I100500	100500738	100506432	1.35	[{'connected_gene': 'NR1H4', 'score': 561.53}, {'connected_gene': 'UTP20', 'score': 12.93}, {'connected_gene': 'SCYL2', 'score': 11.94}, {'connected_gene': 'ENSG00000271177', 'score': 0.34}]
chr12	GH12I101051	101051073	101053724	1.1	[{'connected_gene': 'ACTR6', 'score': 14.15}, {'connected_gene': 'UTP20', 'score': 12.88}, {'connected_gene': 'ENSG00000257543', 'score': 9.87}, {'connected_gene': 'GAS2L3', 'score': 4.78}, {'connected_gene': 'SNX5P2', 'score': 0.39}, {'connected_gene': 'ENSG00000258007', 'score': 0.39}, {'connected_gene': 'ANO4', 'score': 0.06}]
chr12	GH12I101406	101406246	101409220	2.06	[{'connected_gene': 'ARL1', 'score': 568.0}, {'connected_gene': 'ENSG00000257543', 'score': 550.77}, {'connected_gene': 'UTP20', 'score': 0.13}]
chr12	GH12I101875	101875119	101879576	2.38	[{'connected_gene': 'DRAM1', 'score': 577.07}, {'connected_gene': 'ENSG00000257222', 'score': 13.24}, {'connected_gene': 'CHPT1', 'score': 13.14}, {'connected_gene': 'UTP20', 'score': 10.32}, {'connected_gene': 'PARPBP', 'score': 9.8}, {'connected_gene': 'GNPTAB', 'score': 9.8}, {'connected_gene': 'PIR46358', 'score': 0.25}]
chr12	GH12I102060	102060617	102062732	2.01	[{'connected_gene': 'WASHC3', 'score': 585.47}, {'connected_gene': 'ENSG00000257222', 'score': 550.77}, {'connected_gene': 'UTP20', 'score': 19.1}, {'connected_gene': 'NUP37', 'score': 12.46}, {'connected_gene': 'PARPBP', 'score': 4.79}, {'connected_gene': 'NENFP2', 'score': 0.15}]
chr12	GH12I101279	101279201	101281201	1.96	[{'connected_gene': 'UTP20', 'score': 567.74}, {'connected_gene': 'ARL1', 'score': 19.34}, {'connected_gene': 'ENSG00000257222', 'score': 14.06}, {'connected_gene': 'NUP37', 'score': 12.85}]
chr12	GH12I101242	101242357	101247145	0.31	[{'connected_gene': 'SLC5A8', 'score': 11.13}, {'connected_gene': 'ARL1', 'score': 4.65}, {'connected_gene': 'RPS6P19', 'score': 0.37}, {'connected_gene': 'UTP20', 'score': 0.28}]
chr12	GH12I101240	101240495	101242270	0.2	[{'connected_gene': 'SLC5A8', 'score': 11.46}, {'connected_gene': 'ARL1', 'score': 7.48}, {'connected_gene': 'RPS6P19', 'score': 0.39}, {'connected_gene': 'UTP20', 'score': 0.28}]
chr12	GH12I101234	101234657	101237366	0.2	[{'connected_gene': 'SLC5A8', 'score': 16.67}, {'connected_gene': 'PARPBP', 'score': 4.45}, {'connected_gene': 'RPS6P19', 'score': 0.44}, {'connected_gene': 'UTP20', 'score': 0.26}]
chr12	GH12I101250	101250082	101250954	0.31	[{'connected_gene': 'SLC5A8', 'score': 10.47}, {'connected_gene': 'UTP20', 'score': 4.58}, {'connected_gene': 'RPS6P19', 'score': 0.34}]
chr12	GH12I101669	101669942	101670800	1.02	[{'connected_gene': 'LOC105369936', 'score': 18.24}, {'connected_gene': 'NUP37', 'score': 15.67}, {'connected_gene': 'ENSG00000257222', 'score': 12.52}, {'connected_gene': 'CHPT1', 'score': 12.51}, {'connected_gene': 'UTP20', 'score': 12.3}, {'connected_gene': 'SYCP3', 'score': 10.6}, {'connected_gene': 'GC12P101665', 'score': 0.44}, {'connected_gene': 'ENSG00000274560', 'score': 0.31}, {'connected_gene': 'MYBPC1', 'score': 0.15}]
chr12	GH12I101230	101230401	101231190	0.31	[{'connected_gene': 'ENSG00000241744', 'score': 550.77}, {'connected_gene': 'RPS6P19', 'score': 550.77}, {'connected_gene': 'SLC5A8', 'score': 11.18}, {'connected_gene': 'UTP20', 'score': 0.25}]