PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000248073	[[14909957, 14911023]]	[[14909985, 14910948]]
NM_198944	[[14909985, 14910948]]	[[14909985, 14910948]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr19	GH19I014782	14782858	14786862	1.52	[{'connected_gene': 'DCAF15', 'score': 29.08}, {'connected_gene': 'DDX39A', 'score': 24.45}, {'connected_gene': 'RFX1', 'score': 20.55}, {'connected_gene': 'ADGRE2', 'score': 19.87}, {'connected_gene': 'AKAP8', 'score': 16.14}, {'connected_gene': 'BRD4', 'score': 12.47}, {'connected_gene': 'OR7C1', 'score': 12.23}, {'connected_gene': 'ADGRE5', 'score': 9.32}, {'connected_gene': 'ZNF333', 'score': 8.05}, {'connected_gene': 'ADGRE3', 'score': 6.93}, {'connected_gene': 'OR7A5', 'score': 5.82}, {'connected_gene': 'PKN1', 'score': 5.61}, {'connected_gene': 'DNAJB1', 'score': 2.2}, {'connected_gene': 'LOC100129118', 'score': 0.44}]
chr19	GH19I015135	15135137	15137051	0.71	[{'connected_gene': 'SYDE1', 'score': 11.6}, {'connected_gene': 'EPHX3', 'score': 10.57}, {'connected_gene': 'SLC1A6', 'score': 10.28}, {'connected_gene': 'CCDC105', 'score': 10.28}, {'connected_gene': 'OR7A10', 'score': 10.25}, {'connected_gene': 'OR7C1', 'score': 9.52}, {'connected_gene': 'ILVBL', 'score': 6.96}, {'connected_gene': 'OR10B1P', 'score': 0.44}]
chr19	GH19I015137	15137314	15139471	0.31	[{'connected_gene': 'SYDE1', 'score': 11.58}, {'connected_gene': 'EPHX3', 'score': 10.57}, {'connected_gene': 'CCDC105', 'score': 10.28}, {'connected_gene': 'SLC1A6', 'score': 10.28}, {'connected_gene': 'OR7A10', 'score': 10.25}, {'connected_gene': 'OR7C1', 'score': 9.52}, {'connected_gene': 'ILVBL', 'score': 6.76}, {'connected_gene': 'OR10B1P', 'score': 0.77}]
chr19	GH19I015129	15129450	15131357	0.64	[{'connected_gene': 'SYDE1', 'score': 11.82}, {'connected_gene': 'OR7C1', 'score': 9.8}, {'connected_gene': 'ADGRE2', 'score': 4.45}, {'connected_gene': 'ILVBL', 'score': 0.77}, {'connected_gene': 'OR10B1P', 'score': 0.39}]
chr19	GH19I014671	14671695	14676600	1.71	[{'connected_gene': 'ADGRE3', 'score': 587.48}, {'connected_gene': 'ZNF333', 'score': 12.32}, {'connected_gene': 'OR7C1', 'score': 9.83}, {'connected_gene': 'ADGRE5', 'score': 7.47}, {'connected_gene': 'OR7A5', 'score': 6.66}, {'connected_gene': 'PKN1', 'score': 5.97}, {'connected_gene': 'ENSG00000275432', 'score': 0.25}]
chr19	GH19I014888	14888201	14889538	0.97	[{'connected_gene': 'OR7A18P', 'score': 550.77}, {'connected_gene': 'OR7C1', 'score': 11.1}, {'connected_gene': 'RNU6-782P', 'score': 10.5}, {'connected_gene': 'OR7A5', 'score': 6.14}, {'connected_gene': 'OR7A1P', 'score': 0.44}]
chr19	GH19I015194	15194876	15201401	2.31	[{'connected_gene': 'NOTCH3', 'score': 550.77}, {'connected_gene': 'AKAP8', 'score': 29.12}, {'connected_gene': 'BRD4', 'score': 14.33}, {'connected_gene': 'EPHX3', 'score': 12.88}, {'connected_gene': 'RNU6-782P', 'score': 11.6}, {'connected_gene': 'ZNF333', 'score': 11.31}, {'connected_gene': 'TPM4', 'score': 10.9}, {'connected_gene': 'OR7C1', 'score': 10.0}, {'connected_gene': 'MIR6795', 'score': 0.37}, {'connected_gene': 'GC19M015202', 'score': 0.06}]
chr19	GH19I014841	14841938	14841997	0.5	[{'connected_gene': 'OR7A10', 'score': 550.44}, {'connected_gene': 'OR7C1', 'score': 0.44}]
chr19	GH19I014775	14775340	14777475	1.92	[{'connected_gene': 'ADGRE2', 'score': 573.1}, {'connected_gene': 'OR7C1', 'score': 11.65}, {'connected_gene': 'ZNF333', 'score': 11.35}, {'connected_gene': 'GC19M014744', 'score': 0.31}]
chr19	GH19I014778	14778201	14778608	0.7	[{'connected_gene': 'ADGRE2', 'score': 555.43}, {'connected_gene': 'OR7C1', 'score': 12.22}, {'connected_gene': 'ZNF333', 'score': 6.98}, {'connected_gene': 'GC19M014744', 'score': 0.31}]
chr19	GH19I015629	15629201	15629693	0.94	[{'connected_gene': 'OR10H5', 'score': 10.93}, {'connected_gene': 'OR7C1', 'score': 9.17}, {'connected_gene': 'CYP4F12', 'score': 6.84}, {'connected_gene': 'CYP4F3', 'score': 0.39}, {'connected_gene': 'CYP4F8', 'score': 0.39}]
chr19	GH19I014840	14840289	14840438	0.52	[{'connected_gene': 'OR7C1', 'score': 0.77}, {'connected_gene': 'OR7A10', 'score': 0.44}]
chr19	GH19I015038	15038430	15038579	0.46	[{'connected_gene': 'OR7C1', 'score': 10.83}, {'connected_gene': 'CASP14', 'score': 0.39}, {'connected_gene': 'SLC1A6', 'score': 0.37}]
chr19	GH19I015037	15037690	15037839	0.2	[{'connected_gene': 'OR7C1', 'score': 10.83}, {'connected_gene': 'CASP14', 'score': 0.39}, {'connected_gene': 'SLC1A6', 'score': 0.39}]
chr19	GH19I014890	14890769	14890918	0.85	[{'connected_gene': 'OR7C1', 'score': 11.09}, {'connected_gene': 'RNU6-782P', 'score': 10.5}, {'connected_gene': 'OR7A5', 'score': 5.71}, {'connected_gene': 'OR7A18P', 'score': 0.77}, {'connected_gene': 'OR7A1P', 'score': 0.44}]
chr19	GH19I014618	14618723	14620477	0.38	[{'connected_gene': 'OR7C1', 'score': 10.2}, {'connected_gene': 'ITGB1P1', 'score': 0.77}, {'connected_gene': 'RN7SL842P', 'score': 0.29}, {'connected_gene': 'ADGRE3', 'score': 0.19}]
chr19	GH19I014835	14835149	14835298	0.2	[{'connected_gene': 'OR7A5', 'score': 580.48}, {'connected_gene': 'OR7C1', 'score': 550.77}, {'connected_gene': 'GC19M014827', 'score': 0.44}]
chr19	GH19I014830	14830809	14830958	0.62	[{'connected_gene': 'OR7A5', 'score': 0.77}, {'connected_gene': 'GC19M014827', 'score': 0.77}, {'connected_gene': 'OR7C1', 'score': 0.77}]
chr19	GH19I015123	15123396	15127107	2.28	[{'connected_gene': 'ILVBL', 'score': 557.35}, {'connected_gene': 'ENSG00000268564', 'score': 550.77}, {'connected_gene': 'AKAP8', 'score': 47.35}, {'connected_gene': 'BRD4', 'score': 24.67}, {'connected_gene': 'ZNF333', 'score': 22.93}, {'connected_gene': 'TPM4', 'score': 20.19}, {'connected_gene': 'AKAP8L', 'score': 19.3}, {'connected_gene': 'DDX39A', 'score': 12.42}, {'connected_gene': 'OR1I1', 'score': 12.21}, {'connected_gene': 'ADGRL1', 'score': 12.08}, {'connected_gene': 'ENSG00000268189', 'score': 11.65}, {'connected_gene': 'RAB8A', 'score': 10.81}, {'connected_gene': 'OR7C1', 'score': 9.8}, {'connected_gene': 'GC19P015120', 'score': 0.77}]
chr19	GH19I015097	15097733	15100372	0.81	[{'connected_gene': 'RNU6-782P', 'score': 11.92}, {'connected_gene': 'AKAP8L', 'score': 10.68}, {'connected_gene': 'OR7C1', 'score': 10.14}, {'connected_gene': 'OR7A10', 'score': 10.05}, {'connected_gene': 'ENSG00000268189', 'score': 9.69}, {'connected_gene': 'SYDE1', 'score': 7.0}, {'connected_gene': 'GC19P015087', 'score': 0.39}]
chr19	GH19I015101	15101610	15101739	0.59	[{'connected_gene': 'RNU6-782P', 'score': 12.06}, {'connected_gene': 'OR7C1', 'score': 9.06}, {'connected_gene': 'SYDE1', 'score': 0.44}, {'connected_gene': 'GC19P015087', 'score': 0.39}]
chr19	GH19I015245	15245861	15254456	1.26	[{'connected_gene': 'PIR55370', 'score': 550.77}, {'connected_gene': 'GC19M015250', 'score': 550.77}, {'connected_gene': 'GC19P015251', 'score': 550.77}, {'connected_gene': 'PIR62141', 'score': 550.77}, {'connected_gene': 'AKAP8L', 'score': 11.27}, {'connected_gene': 'AKAP8', 'score': 11.24}, {'connected_gene': 'RNU6-782P', 'score': 10.93}, {'connected_gene': 'OR7C1', 'score': 9.46}, {'connected_gene': 'PIR40704', 'score': 0.77}, {'connected_gene': 'GC19M015255', 'score': 0.77}, {'connected_gene': 'PIR41195', 'score': 0.77}, {'connected_gene': 'BRD4', 'score': 0.18}, {'connected_gene': 'GC19M015202', 'score': 0.06}]