PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000477822	[[153291663, 153292549], [153293406, 153295120]]	None
ENST00000229758	[[153291663, 153292549], [153293406, 153293589], [153294180, 153294271], [153296041, 153296756], [153303991, 153304153]]	[[153292297, 153292549], [153293406, 153293589], [153294180, 153294271], [153296041, 153296756], [153303991, 153304094]]
ENST00000367241	[[153291663, 153292549], [153293406, 153293589], [153294180, 153294271], [153296041, 153296756], [153304368, 153304714]]	[[153292297, 153292549], [153293406, 153293589], [153294180, 153294271], [153296041, 153296721]]
NM_012177	[[153291653, 153292549], [153293406, 153293589], [153294180, 153294271], [153296041, 153296756], [153303991, 153304217]]	[[153292297, 153292549], [153293406, 153293589], [153294180, 153294271], [153296041, 153296756], [153303991, 153304094]]
NM_001142522	[[153291653, 153292549], [153293406, 153293589], [153294180, 153294271], [153296041, 153296756], [153304368, 153304754]]	[[153292297, 153292549], [153293406, 153293589], [153294180, 153294271], [153296041, 153296721]]

Promoter

Chrom	Start	End	Description
chr6	153304148	153304160	CAGE_peak_3_at_FBXO5_5end
chr6	153304166	153304194	CAGE_peak_1_at_FBXO5_5end
chr6	153304697	153304734	CAGE_peak_2_at_FBXO5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I152975	152975001	152975800	0.77	[{'connected_gene': 'MTRF1L', 'score': 52.36}, {'connected_gene': 'FBXO5', 'score': 0.44}, {'connected_gene': 'ENSG00000227627', 'score': 0.44}, {'connected_gene': 'ENSG00000220745', 'score': 0.37}]
chr6	GH06I152978	152978601	152979000	0.38	[{'connected_gene': 'MTRF1L', 'score': 27.84}, {'connected_gene': 'FBXO5', 'score': 0.77}, {'connected_gene': 'ENSG00000227627', 'score': 0.77}, {'connected_gene': 'ENSG00000220745', 'score': 0.37}]
chr6	GH06I152980	152980263	152985920	2.09	[{'connected_gene': 'FBXO5', 'score': 608.13}, {'connected_gene': 'PIR33309', 'score': 550.77}, {'connected_gene': 'ENSG00000227627', 'score': 550.77}, {'connected_gene': 'GC06P152985', 'score': 550.77}, {'connected_gene': 'MTRF1L', 'score': 36.34}, {'connected_gene': 'RPL27AP6', 'score': 10.27}, {'connected_gene': 'ENSG00000220745', 'score': 0.34}]
chr6	GH06I152572	152572906	152573055	0.87	[{'connected_gene': 'FBXO5', 'score': 11.79}, {'connected_gene': 'NANOGP11', 'score': 0.31}, {'connected_gene': 'SYNE1', 'score': 0.21}]
chr6	GH06I153787	153787142	153788071	0.65	[{'connected_gene': 'FBXO5', 'score': 54.85}, {'connected_gene': 'SCAF8', 'score': 54.06}, {'connected_gene': 'RPL27AP6', 'score': 10.93}, {'connected_gene': 'RNU6-896P', 'score': 0.14}, {'connected_gene': 'GC06M153939', 'score': 0.1}]
chr6	GH06I153786	153786786	153786895	0.68	[{'connected_gene': 'FBXO5', 'score': 54.85}, {'connected_gene': 'SCAF8', 'score': 54.06}, {'connected_gene': 'RGS17', 'score': 11.36}, {'connected_gene': 'RPL27AP6', 'score': 10.93}, {'connected_gene': 'RNU6-896P', 'score': 0.14}, {'connected_gene': 'GC06M153939', 'score': 0.1}]
chr6	GH06I152458	152458288	152459662	0.84	[{'connected_gene': 'FBXO5', 'score': 10.93}, {'connected_gene': 'RNA5SP223', 'score': 10.73}, {'connected_gene': 'ENSG00000226193', 'score': 10.7}, {'connected_gene': 'SYNE1', 'score': 10.57}, {'connected_gene': 'GC06P152451', 'score': 0.44}, {'connected_gene': 'NANOGP11', 'score': 0.17}]
chr6	GH06I152093	152093804	152098346	1.15	[{'connected_gene': 'FBXO5', 'score': 19.4}, {'connected_gene': 'HSPA8P15', 'score': 12.92}, {'connected_gene': 'ZBTB2', 'score': 9.86}, {'connected_gene': 'ENSG00000284615', 'score': 0.37}, {'connected_gene': 'PIR34901', 'score': 0.19}, {'connected_gene': 'ESR1', 'score': 0.05}]
chr6	GH06I152049	152049914	152051187	0.52	[{'connected_gene': 'FBXO5', 'score': 12.18}, {'connected_gene': 'ENSG00000233823', 'score': 9.93}, {'connected_gene': 'HSPA8P15', 'score': 9.84}, {'connected_gene': 'PIR34901', 'score': 0.31}, {'connected_gene': 'ENSG00000284615', 'score': 0.21}, {'connected_gene': 'ESR1', 'score': 0.05}]