Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000265881 [[114310107, 114310397], [114311377, 114311461], [114314577, 114314655], [114315262, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114321001]] [[114310250, 114310397], [114311377, 114311461], [114314577, 114314655], [114315262, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114320697]]
ENST00000544010 [[114310156, 114310397], [114311377, 114311461], [114314577, 114315100]] None
ENST00000544196 [[114310187, 114310397], [114311377, 114311461], [114312466, 114312624]] [[114310250, 114310397], [114311377, 114311461], [114312466, 114312493]]
ENST00000539754 [[114310192, 114310397], [114311377, 114311461], [114314577, 114314655], [114315307, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114320761]] [[114310250, 114310397], [114311377, 114311461], [114314577, 114314655], [114315307, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114320697]]
ENST00000539275 [[114310205, 114310397], [114311377, 114311461], [114320567, 114321001]] [[114310250, 114310397], [114311377, 114311461], [114320567, 114320576]]
ENST00000539333 [[114310209, 114310397], [114311377, 114311461], [114316700, 114317079]] None
ENST00000543243 [[114310216, 114310397], [114311377, 114311748]] None
ENST00000541703 [[114310220, 114310397], [114311377, 114311461], [114314577, 114314655], [114316700, 114316809], [114318547, 114318574]] [[114310250, 114310397], [114311377, 114311461], [114314577, 114314655], [114316700, 114316757]]
ENST00000543131 [[114310232, 114310397], [114316700, 114316809], [114318547, 114318601], [114320567, 114320778]] [[114310250, 114310397], [114316700, 114316757]]
ENST00000538198 [[114310267, 114310397], [114311377, 114311461], [114316700, 114316809], [114318547, 114318601], [114320567, 114320639]] [[114310267, 114310397], [114311377, 114311461], [114316700, 114316757]]
ENST00000539119 [[114310303, 114310397], [114314577, 114314655], [114315262, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114320784]] [[114310303, 114310397], [114314577, 114314655], [114315262, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114320697]]
ENST00000542186 [[114310482, 114310509], [114311377, 114311461], [114314577, 114314929]] None
ENST00000544827 [[114310842, 114310868], [114311377, 114311461], [114314577, 114314655], [114315262, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114320984]] [[114310842, 114310868], [114311377, 114311461], [114314577, 114314655], [114315262, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114320697]]
ENST00000546316 [[114311392, 114311461], [114314577, 114314655], [114316700, 114316809], [114318547, 114318601], [114320567, 114320983]] [[114311392, 114311461], [114314577, 114314655], [114316700, 114316757]]
ENST00000539788 [[114314873, 114314916], [114316700, 114316809], [114318547, 114318601], [114320567, 114320987]] [[114314873, 114314916], [114316700, 114316809], [114318547, 114318601], [114320567, 114320697]]
ENST00000538403 [[114314876, 114314934], [114315262, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114320987]] [[114314876, 114314934], [114315262, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114320697]]
ENST00000538791 [[114314876, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114320987]] [[114315223, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114320697]]
ENST00000540492 [[114315839, 114316809], [114318547, 114318601], [114320567, 114320631]] None
ENST00000544507 [[114319658, 114319960], [114320567, 114320906]] None
NM_015523 [[114310107, 114310397], [114311377, 114311461], [114314577, 114314655], [114315262, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114321001]] [[114310250, 114310397], [114311377, 114311461], [114314577, 114314655], [114315262, 114315374], [114316700, 114316809], [114318547, 114318601], [114320567, 114320697]]
Promoter
Chrom Start End Description
chr11 114310081 114310082 CAGE_peak_6_at_REXO2_5end
chr11 114310102 114310118 CAGE_peak_3_at_REXO2_5end
chr11 114310124 114310140 CAGE_peak_4_at_REXO2_5end
chr11 114310164 114310236 CAGE_peak_1_at_REXO2_5end
chr11 114310237 114310271 CAGE_peak_2_at_REXO2_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr1 GH01I026966 26966963 26967659 0.85 [{'connected_gene': 'NR0B2', 'score': 11.82}, {'connected_gene': 'NUDC', 'score': 11.8}, {'connected_gene': 'FAM46B', 'score': 11.43}, {'connected_gene': 'GPATCH3', 'score': 10.89}, {'connected_gene': 'SFN', 'score': 9.98}, {'connected_gene': 'LOC105376890', 'score': 9.85}, {'connected_gene': 'WDTC1', 'score': 9.85}, {'connected_gene': 'ACTG1P20', 'score': 9.48}, {'connected_gene': 'RNU6-48P', 'score': 9.48}, {'connected_gene': 'TMEM222', 'score': 9.48}, {'connected_gene': 'GC01P026960', 'score': 0.44}, {'connected_gene': 'GC01P026975', 'score': 0.44}]
chr1 GH01I026824 26824092 26830615 2.42 [{'connected_gene': 'ZDHHC18', 'score': 605.8}, {'connected_gene': 'ARID1A', 'score': 25.36}, {'connected_gene': 'HMGN2', 'score': 15.62}, {'connected_gene': 'SFN', 'score': 11.92}, {'connected_gene': 'ACTG1P20', 'score': 11.71}, {'connected_gene': 'WASF2', 'score': 11.65}, {'connected_gene': 'ENSG00000226698', 'score': 11.59}, {'connected_gene': 'GPATCH3', 'score': 11.11}, {'connected_gene': 'NUDC', 'score': 11.11}, {'connected_gene': 'NPM1P39', 'score': 11.07}, {'connected_gene': 'LOC101928324', 'score': 11.0}, {'connected_gene': 'RPL17P9', 'score': 10.85}, {'connected_gene': 'ENSG00000231344', 'score': 9.8}, {'connected_gene': 'TRNP1', 'score': 8.12}, {'connected_gene': 'RPS6KA1', 'score': 7.83}, {'connected_gene': 'WDTC1', 'score': 5.43}, {'connected_gene': 'SLC9A1', 'score': 3.35}, {'connected_gene': 'PIGV', 'score': 2.06}, {'connected_gene': 'GC01P026859', 'score': 0.29}]
chr1 GH01I026830 26830710 26835219 1.66 [{'connected_gene': 'ZDHHC18', 'score': 65.8}, {'connected_gene': 'PIGV', 'score': 27.03}, {'connected_gene': 'SFN', 'score': 12.01}, {'connected_gene': 'ENSG00000226698', 'score': 11.94}, {'connected_gene': 'GPATCH3', 'score': 10.78}, {'connected_gene': 'NUDC', 'score': 10.78}, {'connected_gene': 'RPS6KA1', 'score': 9.95}, {'connected_gene': 'WDTC1', 'score': 7.85}, {'connected_gene': 'LOC101928728', 'score': 7.2}, {'connected_gene': 'OSTCP2', 'score': 4.64}, {'connected_gene': 'SLC9A1', 'score': 4.39}, {'connected_gene': 'ARID1A', 'score': 4.21}, {'connected_gene': 'GC01P026859', 'score': 0.31}]
chr1 GH01I026721 26721715 26725593 2.24 [{'connected_gene': 'ARID1A', 'score': 43.05}, {'connected_gene': 'PIGV', 'score': 27.08}, {'connected_gene': 'ACTG1P20', 'score': 25.95}, {'connected_gene': 'GPN2', 'score': 21.56}, {'connected_gene': 'GPATCH3', 'score': 21.1}, {'connected_gene': 'HMGN2', 'score': 19.94}, {'connected_gene': 'LOC101928324', 'score': 13.18}, {'connected_gene': 'LOC101928728', 'score': 11.97}, {'connected_gene': 'SELENON', 'score': 11.9}, {'connected_gene': 'NPM1P39', 'score': 11.48}, {'connected_gene': 'MAP3K6', 'score': 10.97}, {'connected_gene': 'SFN', 'score': 10.95}, {'connected_gene': 'NUDC', 'score': 9.71}, {'connected_gene': 'TRNP1', 'score': 6.49}, {'connected_gene': 'GC01P026765', 'score': 0.28}]
chr1 GH01I026727 26727601 26727800 0.58 [{'connected_gene': 'ARID1A', 'score': 12.43}, {'connected_gene': 'PIGV', 'score': 12.27}, {'connected_gene': 'SFN', 'score': 10.95}, {'connected_gene': 'ENSG00000226698', 'score': 10.42}, {'connected_gene': 'RPS6KA1', 'score': 10.13}, {'connected_gene': 'GPATCH3', 'score': 9.89}, {'connected_gene': 'NUDC', 'score': 9.89}, {'connected_gene': 'NPM1P39', 'score': 9.67}, {'connected_gene': 'HMGN2', 'score': 9.51}, {'connected_gene': 'ZDHHC18', 'score': 8.35}, {'connected_gene': 'LOC101928728', 'score': 0.29}, {'connected_gene': 'GC01P026765', 'score': 0.28}]
chr1 GH01I026733 26733331 26734879 0.51 [{'connected_gene': 'ARID1A', 'score': 12.4}, {'connected_gene': 'PIGV', 'score': 11.38}, {'connected_gene': 'SFN', 'score': 10.69}, {'connected_gene': 'ENSG00000226698', 'score': 10.42}, {'connected_gene': 'RPS6KA1', 'score': 10.13}, {'connected_gene': 'GPATCH3', 'score': 9.9}, {'connected_gene': 'NUDC', 'score': 9.9}, {'connected_gene': 'HMGN2', 'score': 9.09}, {'connected_gene': 'ZDHHC18', 'score': 8.36}, {'connected_gene': 'GC01P026765', 'score': 0.31}, {'connected_gene': 'LOC101928728', 'score': 0.28}]
chr1 GH01I026597 26597670 26597839 0.63 [{'connected_gene': 'ARID1A', 'score': 12.11}, {'connected_gene': 'PIGV', 'score': 11.7}, {'connected_gene': 'SFN', 'score': 11.67}, {'connected_gene': 'ENSG00000226698', 'score': 11.59}, {'connected_gene': 'MIR1976', 'score': 11.28}, {'connected_gene': 'RPS6KA1', 'score': 11.23}, {'connected_gene': 'GPATCH3', 'score': 10.84}, {'connected_gene': 'HMGN2', 'score': 10.06}, {'connected_gene': 'NUDC', 'score': 9.79}, {'connected_gene': 'GC01M026595', 'score': 0.77}, {'connected_gene': 'ENSG00000252802', 'score': 0.77}, {'connected_gene': 'ENSG00000229247', 'score': 0.26}]
chr1 GH01I026618 26618391 26622400 1.9 [{'connected_gene': 'ARID1A', 'score': 160.87}, {'connected_gene': 'HMGN2', 'score': 112.32}, {'connected_gene': 'ACTG1P20', 'score': 94.94}, {'connected_gene': 'GPN2', 'score': 64.9}, {'connected_gene': 'ZNF593', 'score': 40.06}, {'connected_gene': 'GPATCH3', 'score': 31.53}, {'connected_gene': 'AHDC1', 'score': 30.24}, {'connected_gene': 'RPL17P9', 'score': 29.98}, {'connected_gene': 'LOC101928324', 'score': 29.95}, {'connected_gene': 'NPM1P39', 'score': 28.09}, {'connected_gene': 'RPS6KA1', 'score': 21.2}, {'connected_gene': 'SELENON', 'score': 21.15}, {'connected_gene': 'WASF2', 'score': 20.32}, {'connected_gene': 'PIGV', 'score': 14.27}, {'connected_gene': 'TMEM222', 'score': 13.4}, {'connected_gene': 'MAP3K6', 'score': 12.23}, {'connected_gene': 'SH3BGRL3', 'score': 11.97}, {'connected_gene': 'SFN', 'score': 10.86}, {'connected_gene': 'MIR1976', 'score': 10.46}, {'connected_gene': 'NUDC', 'score': 10.05}, {'connected_gene': 'UBXN11', 'score': 9.6}, {'connected_gene': 'ZDHHC18', 'score': 3.73}, {'connected_gene': 'CATSPER4', 'score': 1.58}, {'connected_gene': 'ENSG00000229247', 'score': 0.34}, {'connected_gene': 'GC01M026595', 'score': 0.31}, {'connected_gene': 'ENSG00000252802', 'score': 0.31}]
chr1 GH01I026691 26690601 26703514 3.32 [{'connected_gene': 'ARID1A', 'score': 632.61}, {'connected_gene': 'LOC101928728', 'score': 580.15}, {'connected_gene': 'HMGN2', 'score': 78.07}, {'connected_gene': 'ACTG1P20', 'score': 43.91}, {'connected_gene': 'PIGV', 'score': 39.6}, {'connected_gene': 'LOC101928324', 'score': 37.34}, {'connected_gene': 'GPN2', 'score': 28.12}, {'connected_gene': 'GPATCH3', 'score': 24.89}, {'connected_gene': 'TMEM222', 'score': 22.69}, {'connected_gene': 'RPL17P9', 'score': 20.91}, {'connected_gene': 'NPM1P39', 'score': 18.08}, {'connected_gene': 'ZNF593', 'score': 13.56}, {'connected_gene': 'SFN', 'score': 10.75}, {'connected_gene': 'AHDC1', 'score': 10.73}, {'connected_gene': 'MAP3K6', 'score': 10.67}, {'connected_gene': 'ENSG00000226698', 'score': 10.59}, {'connected_gene': 'WASF2', 'score': 10.4}, {'connected_gene': 'RPS6KA1', 'score': 10.19}, {'connected_gene': 'NUDC', 'score': 10.07}, {'connected_gene': 'ZDHHC18', 'score': 8.32}, {'connected_gene': 'OSTCP2', 'score': 5.6}, {'connected_gene': 'TRNP1', 'score': 5.12}, {'connected_gene': 'KDF1', 'score': 4.41}, {'connected_gene': 'SLC9A1', 'score': 1.29}, {'connected_gene': 'CEP85', 'score': 1.12}, {'connected_gene': 'GC01M026693', 'score': 0.77}, {'connected_gene': 'LOC105376888', 'score': 0.39}, {'connected_gene': 'GC01P026765', 'score': 0.2}]
chr1 GH01I026939 26939669 26940925 0.2 [{'connected_gene': 'GPATCH3', 'score': 11.48}, {'connected_gene': 'NUDC', 'score': 11.47}, {'connected_gene': 'FAM46B', 'score': 10.96}, {'connected_gene': 'ENSG00000226698', 'score': 10.72}, {'connected_gene': 'SFN', 'score': 10.23}, {'connected_gene': 'KDF1', 'score': 0.34}, {'connected_gene': 'NR0B2', 'score': 0.31}]
chr1 GH01I026847 26847619 26851565 1.41 [{'connected_gene': 'PIGV', 'score': 14.78}, {'connected_gene': 'ZDHHC18', 'score': 12.73}, {'connected_gene': 'ENSG00000226698', 'score': 12.24}, {'connected_gene': 'GPN2', 'score': 11.85}, {'connected_gene': 'GPATCH3', 'score': 11.82}, {'connected_gene': 'RPS6KA1', 'score': 11.8}, {'connected_gene': 'NUDC', 'score': 11.09}, {'connected_gene': 'CRYBG2', 'score': 3.45}, {'connected_gene': 'SFN', 'score': 2.41}, {'connected_gene': 'ZNF683', 'score': 2.38}, {'connected_gene': 'KDF1', 'score': 2.18}, {'connected_gene': 'GC01P026859', 'score': 0.39}]
chr1 GH01I026782 26782546 26791746 2.55 [{'connected_gene': 'PIGV', 'score': 565.31}, {'connected_gene': 'ARID1A', 'score': 70.91}, {'connected_gene': 'HMGN2', 'score': 50.83}, {'connected_gene': 'ACTG1P20', 'score': 38.44}, {'connected_gene': 'GPN2', 'score': 33.78}, {'connected_gene': 'LOC101928324', 'score': 30.46}, {'connected_gene': 'ENSG00000231344', 'score': 28.14}, {'connected_gene': 'GPATCH3', 'score': 22.02}, {'connected_gene': 'RPL17P9', 'score': 20.53}, {'connected_gene': 'FAM76A', 'score': 18.62}, {'connected_gene': 'RPS6KA1', 'score': 15.61}, {'connected_gene': 'ZDHHC18', 'score': 15.25}, {'connected_gene': 'LOC101928728', 'score': 11.82}, {'connected_gene': 'ENSG00000226698', 'score': 11.38}, {'connected_gene': 'SFN', 'score': 11.29}, {'connected_gene': 'MAP3K6', 'score': 10.79}, {'connected_gene': 'MIR1976', 'score': 10.74}, {'connected_gene': 'NUDC', 'score': 10.62}, {'connected_gene': 'WASF2', 'score': 10.4}, {'connected_gene': 'WDTC1', 'score': 8.88}, {'connected_gene': 'ZNF683', 'score': 2.01}, {'connected_gene': 'SLC9A1', 'score': 1.11}, {'connected_gene': 'GC01P026765', 'score': 0.34}]
chr1 GH01I026754 26754097 26755919 0.56 [{'connected_gene': 'PIGV', 'score': 11.77}, {'connected_gene': 'ARID1A', 'score': 11.39}, {'connected_gene': 'SFN', 'score': 10.5}, {'connected_gene': 'ENSG00000226698', 'score': 10.36}, {'connected_gene': 'GPATCH3', 'score': 10.13}, {'connected_gene': 'RPS6KA1', 'score': 10.06}, {'connected_gene': 'NUDC', 'score': 9.63}, {'connected_gene': 'HMGN2', 'score': 9.07}, {'connected_gene': 'ZDHHC18', 'score': 8.53}, {'connected_gene': 'TRNP1', 'score': 6.64}, {'connected_gene': 'GC01P026765', 'score': 0.44}, {'connected_gene': 'LOC101928728', 'score': 0.22}]
chr1 GH01I026757 26757522 26760475 0.57 [{'connected_gene': 'PIGV', 'score': 26.34}, {'connected_gene': 'ARID1A', 'score': 11.38}, {'connected_gene': 'SFN', 'score': 10.5}, {'connected_gene': 'ENSG00000226698', 'score': 10.37}, {'connected_gene': 'GPATCH3', 'score': 10.13}, {'connected_gene': 'RPS6KA1', 'score': 10.06}, {'connected_gene': 'NUDC', 'score': 9.63}, {'connected_gene': 'HMGN2', 'score': 9.07}, {'connected_gene': 'GC01P026765', 'score': 0.77}, {'connected_gene': 'LOC101928728', 'score': 0.21}]
chr1 GH01I026752 26752629 26753900 0.63 [{'connected_gene': 'PIGV', 'score': 25.74}, {'connected_gene': 'ARID1A', 'score': 11.39}, {'connected_gene': 'ENSG00000226698', 'score': 10.94}, {'connected_gene': 'SFN', 'score': 10.5}, {'connected_gene': 'GPATCH3', 'score': 10.25}, {'connected_gene': 'NUDC', 'score': 10.25}, {'connected_gene': 'RPS6KA1', 'score': 10.06}, {'connected_gene': 'HMGN2', 'score': 9.68}, {'connected_gene': 'GC01P026765', 'score': 0.39}, {'connected_gene': 'LOC101928728', 'score': 0.22}]
chr1 GH01I026730 26730390 26731566 0.66 [{'connected_gene': 'PIGV', 'score': 25.8}, {'connected_gene': 'ARID1A', 'score': 12.41}, {'connected_gene': 'SFN', 'score': 10.68}, {'connected_gene': 'ENSG00000226698', 'score': 10.42}, {'connected_gene': 'RPS6KA1', 'score': 10.13}, {'connected_gene': 'NUDC', 'score': 9.9}, {'connected_gene': 'GPATCH3', 'score': 9.89}, {'connected_gene': 'HMGN2', 'score': 9.09}, {'connected_gene': 'LOC101928728', 'score': 0.29}, {'connected_gene': 'GC01P026765', 'score': 0.29}]
chr1 GH01I026726 26726601 26726800 0.63 [{'connected_gene': 'PIGV', 'score': 12.26}, {'connected_gene': 'ARID1A', 'score': 12.26}, {'connected_gene': 'SFN', 'score': 10.95}, {'connected_gene': 'NUDC', 'score': 9.7}, {'connected_gene': 'GPATCH3', 'score': 9.7}, {'connected_gene': 'LOC101928728', 'score': 0.29}, {'connected_gene': 'GC01P026765', 'score': 0.28}]
chr1 GH01I026720 26720665 26721354 0.56 [{'connected_gene': 'PIGV', 'score': 26.23}, {'connected_gene': 'ARID1A', 'score': 12.27}, {'connected_gene': 'SFN', 'score': 10.94}, {'connected_gene': 'NUDC', 'score': 9.71}, {'connected_gene': 'GPATCH3', 'score': 9.7}, {'connected_gene': 'LOC101928728', 'score': 0.34}, {'connected_gene': 'GC01P026765', 'score': 0.26}]
chr1 GH01I026711 26711683 26719949 0.83 [{'connected_gene': 'PIGV', 'score': 26.67}, {'connected_gene': 'ARID1A', 'score': 16.51}, {'connected_gene': 'NUDC', 'score': 14.77}, {'connected_gene': 'SFN', 'score': 10.94}, {'connected_gene': 'ENSG00000226698', 'score': 10.88}, {'connected_gene': 'RPS6KA1', 'score': 10.28}, {'connected_gene': 'HMGN2', 'score': 9.89}, {'connected_gene': 'GPATCH3', 'score': 9.75}, {'connected_gene': 'NPM1P39', 'score': 9.66}, {'connected_gene': 'ZDHHC18', 'score': 8.33}, {'connected_gene': 'OSTCP2', 'score': 5.6}, {'connected_gene': 'LOC101928728', 'score': 0.37}, {'connected_gene': 'GC01P026765', 'score': 0.25}]
chr1 GH01I026607 26607243 26607491 0.71 [{'connected_gene': 'PIGV', 'score': 16.03}, {'connected_gene': 'ARID1A', 'score': 11.4}, {'connected_gene': 'MIR1976', 'score': 11.36}, {'connected_gene': 'RPS6KA1', 'score': 11.31}, {'connected_gene': 'ENSG00000226698', 'score': 11.26}, {'connected_gene': 'SFN', 'score': 10.9}, {'connected_gene': 'GPATCH3', 'score': 9.97}, {'connected_gene': 'NUDC', 'score': 9.97}, {'connected_gene': 'UBXN11', 'score': 9.34}, {'connected_gene': 'SH3BGRL3', 'score': 2.0}, {'connected_gene': 'GC01M026595', 'score': 0.39}, {'connected_gene': 'ENSG00000252802', 'score': 0.39}, {'connected_gene': 'ENSG00000229247', 'score': 0.29}]
chr1 GH01I026704 26704070 26704219 0.4 [{'connected_gene': 'PIGV', 'score': 11.3}, {'connected_gene': 'SFN', 'score': 10.75}, {'connected_gene': 'ENSG00000226698', 'score': 10.58}, {'connected_gene': 'GPATCH3', 'score': 9.95}, {'connected_gene': 'NUDC', 'score': 9.95}, {'connected_gene': 'HMGN2', 'score': 9.54}, {'connected_gene': 'LOC101928728', 'score': 0.44}, {'connected_gene': 'ARID1A', 'score': 0.39}, {'connected_gene': 'GC01P026765', 'score': 0.22}]
chr1 GH01I026796 26796433 26798546 0.43 [{'connected_gene': 'PIGV', 'score': 14.82}, {'connected_gene': 'SFN', 'score': 11.67}, {'connected_gene': 'ENSG00000226698', 'score': 11.38}, {'connected_gene': 'GPATCH3', 'score': 10.6}, {'connected_gene': 'NUDC', 'score': 10.6}, {'connected_gene': 'MIR1976', 'score': 10.24}, {'connected_gene': 'RPS6KA1', 'score': 10.24}, {'connected_gene': 'HMGN2', 'score': 9.19}, {'connected_gene': 'ZDHHC18', 'score': 8.51}, {'connected_gene': 'KDF1', 'score': 4.45}, {'connected_gene': 'PIR59173', 'score': 0.77}, {'connected_gene': 'GC01P026802', 'score': 0.77}, {'connected_gene': 'GC01P026805', 'score': 0.77}]
chr1 GH01I026705 26705369 26707214 1.39 [{'connected_gene': 'PIGV', 'score': 11.3}, {'connected_gene': 'SFN', 'score': 10.75}, {'connected_gene': 'ENSG00000226698', 'score': 10.59}, {'connected_gene': 'RPS6KA1', 'score': 10.29}, {'connected_gene': 'GPATCH3', 'score': 9.95}, {'connected_gene': 'NUDC', 'score': 9.95}, {'connected_gene': 'HMGN2', 'score': 9.89}, {'connected_gene': 'TRNP1', 'score': 4.96}, {'connected_gene': 'LOC101928728', 'score': 0.44}, {'connected_gene': 'ARID1A', 'score': 0.39}, {'connected_gene': 'GC01P026765', 'score': 0.22}]
chr1 GH01I026598 26598801 26599000 0.63 [{'connected_gene': 'PIGV', 'score': 11.7}, {'connected_gene': 'SFN', 'score': 11.67}, {'connected_gene': 'ENSG00000226698', 'score': 11.59}, {'connected_gene': 'MIR1976', 'score': 11.28}, {'connected_gene': 'RPS6KA1', 'score': 11.23}, {'connected_gene': 'GPATCH3', 'score': 10.84}, {'connected_gene': 'NUDC', 'score': 9.79}, {'connected_gene': 'GC01M026595', 'score': 0.77}, {'connected_gene': 'ENSG00000252802', 'score': 0.77}, {'connected_gene': 'ENSG00000229247', 'score': 0.26}]
chr1 GH01I026602 26602470 26602619 0.8 [{'connected_gene': 'PIGV', 'score': 16.01}, {'connected_gene': 'SFN', 'score': 11.67}, {'connected_gene': 'ENSG00000226698', 'score': 11.59}, {'connected_gene': 'MIR1976', 'score': 11.27}, {'connected_gene': 'RPS6KA1', 'score': 11.21}, {'connected_gene': 'GPATCH3', 'score': 10.84}, {'connected_gene': 'NUDC', 'score': 9.79}, {'connected_gene': 'GC01M026595', 'score': 0.44}, {'connected_gene': 'ENSG00000252802', 'score': 0.44}, {'connected_gene': 'ENSG00000229247', 'score': 0.28}]
chr1 GH01I026888 26888191 26891359 2.04 [{'connected_gene': 'GPN2', 'score': 550.77}, {'connected_gene': 'PIGV', 'score': 14.02}, {'connected_gene': 'SFN', 'score': 12.18}, {'connected_gene': 'HMGN2', 'score': 9.24}, {'connected_gene': 'GPATCH3', 'score': 0.39}, {'connected_gene': 'ENSG00000226698', 'score': 0.39}]
chr1 GH01I027423 27423352 27425561 0.31 [{'connected_gene': 'CD164L2', 'score': 13.67}, {'connected_gene': 'WASF2', 'score': 11.84}, {'connected_gene': 'LOC105376892', 'score': 11.54}, {'connected_gene': 'SFN', 'score': 5.22}, {'connected_gene': 'PIR40118', 'score': 0.44}, {'connected_gene': 'ENSG00000241169', 'score': 0.29}]
chr1 GH01I026739 26739055 26746747 1.42 [{'connected_gene': 'HMGN2', 'score': 30.14}, {'connected_gene': 'PIGV', 'score': 25.62}, {'connected_gene': 'ARID1A', 'score': 24.76}, {'connected_gene': 'ACTG1P20', 'score': 14.97}, {'connected_gene': 'ENSG00000226698', 'score': 11.33}, {'connected_gene': 'SFN', 'score': 10.97}, {'connected_gene': 'RPL17P9', 'score': 10.74}, {'connected_gene': 'GPN2', 'score': 10.28}, {'connected_gene': 'NPM1P39', 'score': 10.14}, {'connected_gene': 'ENSG00000231344', 'score': 10.02}, {'connected_gene': 'GPATCH3', 'score': 9.93}, {'connected_gene': 'NUDC', 'score': 9.93}, {'connected_gene': 'TRNP1', 'score': 6.56}, {'connected_gene': 'GC01P026765', 'score': 0.34}, {'connected_gene': 'LOC101928728', 'score': 0.25}]
chr1 GH01I026856 26856943 26866542 2.64 [{'connected_gene': 'SFN', 'score': 553.85}, {'connected_gene': 'ARID1A', 'score': 80.58}, {'connected_gene': 'HMGN2', 'score': 37.91}, {'connected_gene': 'LOC101928324', 'score': 33.2}, {'connected_gene': 'GPATCH3', 'score': 31.49}, {'connected_gene': 'LOC101928728', 'score': 22.26}, {'connected_gene': 'ACTG1P20', 'score': 21.5}, {'connected_gene': 'ENSG00000231344', 'score': 18.14}, {'connected_gene': 'NPM1P39', 'score': 15.84}, {'connected_gene': 'PIGV', 'score': 14.75}, {'connected_gene': 'RPS6KA1', 'score': 14.31}, {'connected_gene': 'GPN2', 'score': 13.65}, {'connected_gene': 'NUDC', 'score': 13.56}, {'connected_gene': 'ZDHHC18', 'score': 13.08}, {'connected_gene': 'RPL17P9', 'score': 11.94}, {'connected_gene': 'WASF2', 'score': 10.4}, {'connected_gene': 'FAM76A', 'score': 10.34}, {'connected_gene': 'NR0B2', 'score': 4.68}, {'connected_gene': 'ZNF683', 'score': 3.6}, {'connected_gene': 'KDF1', 'score': 3.56}, {'connected_gene': 'FAM46B', 'score': 1.46}, {'connected_gene': 'GC01P026859', 'score': 0.77}]
chr1 GH01I026887 26887210 26887359 0.38 [{'connected_gene': 'SFN', 'score': 12.2}, {'connected_gene': 'HMGN2', 'score': 9.24}, {'connected_gene': 'GPN2', 'score': 0.77}, {'connected_gene': 'ENSG00000226698', 'score': 0.39}]
chr11 GH11I114348 114348046 114349585 0.76 [{'connected_gene': 'REXO2', 'score': 12.11}, {'connected_gene': 'LOC101928940', 'score': 11.76}, {'connected_gene': 'RBM7', 'score': 11.17}, {'connected_gene': 'ENSG00000255663', 'score': 11.17}, {'connected_gene': 'C11orf71', 'score': 11.17}, {'connected_gene': 'ENSG00000256947', 'score': 0.44}, {'connected_gene': 'GC11P114340', 'score': 0.44}]
chr11 GH11I114416 114416103 114417084 0.31 [{'connected_gene': 'REXO2', 'score': 11.87}, {'connected_gene': 'RBM7', 'score': 6.67}, {'connected_gene': 'ENSG00000255663', 'score': 0.37}]
chr11 GH11I114437 114437767 114442064 2.03 [{'connected_gene': 'REXO2', 'score': 550.77}, {'connected_gene': 'LOC100422382', 'score': 0.39}, {'connected_gene': 'ENSG00000255663', 'score': 0.28}]
chr1 GH01I026958 26958880 26962804 2.39 [{'connected_gene': 'KDF1', 'score': 550.77}, {'connected_gene': 'GC01P026960', 'score': 550.77}, {'connected_gene': 'PIGV', 'score': 13.22}, {'connected_gene': 'NR0B2', 'score': 12.17}, {'connected_gene': 'NUDC', 'score': 12.13}, {'connected_gene': 'FAM46B', 'score': 11.42}, {'connected_gene': 'GPATCH3', 'score': 10.98}, {'connected_gene': 'ENSG00000226698', 'score': 10.23}, {'connected_gene': 'SFN', 'score': 10.11}, {'connected_gene': 'LOC105376890', 'score': 9.85}, {'connected_gene': 'WDTC1', 'score': 9.85}, {'connected_gene': 'ACTG1P20', 'score': 9.48}, {'connected_gene': 'RNU6-48P', 'score': 9.48}, {'connected_gene': 'TMEM222', 'score': 9.48}, {'connected_gene': 'HMGN2', 'score': 8.66}, {'connected_gene': 'GC01P026975', 'score': 0.39}]
chr1 GH01I026937 26937777 26938962 0.91 [{'connected_gene': 'NUDC', 'score': 11.74}, {'connected_gene': 'GPATCH3', 'score': 11.74}, {'connected_gene': 'FAM46B', 'score': 10.96}, {'connected_gene': 'ENSG00000226698', 'score': 10.72}, {'connected_gene': 'SFN', 'score': 10.23}, {'connected_gene': 'PIGV', 'score': 10.16}, {'connected_gene': 'KDF1', 'score': 0.34}, {'connected_gene': 'NR0B2', 'score': 0.34}]
chr1 GH01I027516 27516970 27530656 2.33 [{'connected_gene': 'LOC105376892', 'score': 550.77}, {'connected_gene': 'ARID1A', 'score': 69.38}, {'connected_gene': 'ACTG1P20', 'score': 67.31}, {'connected_gene': 'MAP3K6', 'score': 41.06}, {'connected_gene': 'FAM76A', 'score': 35.16}, {'connected_gene': 'PHACTR4', 'score': 30.98}, {'connected_gene': 'NPM1P39', 'score': 30.87}, {'connected_gene': 'EYA3', 'score': 30.47}, {'connected_gene': 'WASF2', 'score': 25.62}, {'connected_gene': 'GPN2', 'score': 24.77}, {'connected_gene': 'ENSG00000231344', 'score': 19.77}, {'connected_gene': 'PPP1R8', 'score': 18.28}, {'connected_gene': 'CD164L2', 'score': 12.24}, {'connected_gene': 'SYTL1', 'score': 11.91}, {'connected_gene': 'RCC1', 'score': 10.85}, {'connected_gene': 'GPATCH3', 'score': 10.84}, {'connected_gene': 'LOC101928728', 'score': 10.78}, {'connected_gene': 'SNORA73B', 'score': 10.41}, {'connected_gene': 'FAM46B', 'score': 10.1}, {'connected_gene': 'SFN', 'score': 4.23}, {'connected_gene': 'WDTC1', 'score': 1.69}, {'connected_gene': 'FGR', 'score': 1.61}, {'connected_gene': 'THEMIS2', 'score': 1.33}, {'connected_gene': 'GC01P027520', 'score': 0.77}, {'connected_gene': 'GC01P027602', 'score': 0.18}]
chr11 GH11I114346 114346601 114347200 0.43 [{'connected_gene': 'RBM7', 'score': 11.09}, {'connected_gene': 'ENSG00000255663', 'score': 11.09}, {'connected_gene': 'C11orf71', 'score': 11.09}, {'connected_gene': 'LOC101928940', 'score': 10.93}, {'connected_gene': 'REXO2', 'score': 4.86}, {'connected_gene': 'ENSG00000256947', 'score': 0.44}, {'connected_gene': 'GC11P114340', 'score': 0.44}]
chr11 GH11I114447 114447200 114449004 0.66 [{'connected_gene': 'RBM7', 'score': 10.87}, {'connected_gene': 'ENSG00000255663', 'score': 10.87}, {'connected_gene': 'C11orf71', 'score': 10.87}, {'connected_gene': 'LOC101928940', 'score': 10.59}, {'connected_gene': 'LOC100422382', 'score': 0.77}, {'connected_gene': 'REXO2', 'score': 0.44}]
chr1 GH01I026581 26581920 26583983 1.41 [{'connected_gene': 'MIR1976', 'score': 11.98}, {'connected_gene': 'RPS6KA1', 'score': 11.9}, {'connected_gene': 'SFN', 'score': 10.86}, {'connected_gene': 'ENSG00000226698', 'score': 10.7}, {'connected_gene': 'UBXN11', 'score': 10.24}, {'connected_gene': 'GPATCH3', 'score': 10.18}, {'connected_gene': 'NUDC', 'score': 10.18}, {'connected_gene': 'PIGV', 'score': 4.14}, {'connected_gene': 'SH3BGRL3', 'score': 1.47}, {'connected_gene': 'RN7SL679P', 'score': 0.39}]
chr1 GH01I026584 26584210 26584399 1.03 [{'connected_gene': 'MIR1976', 'score': 11.82}, {'connected_gene': 'RPS6KA1', 'score': 11.74}, {'connected_gene': 'SFN', 'score': 10.86}, {'connected_gene': 'ENSG00000226698', 'score': 10.7}, {'connected_gene': 'NUDC', 'score': 10.18}, {'connected_gene': 'GPATCH3', 'score': 10.18}, {'connected_gene': 'RN7SL679P', 'score': 0.44}]
chr1 GH01I026760 26760551 26763503 0.38 [{'connected_gene': 'GC01P026765', 'score': 550.77}, {'connected_gene': 'PIGV', 'score': 26.22}, {'connected_gene': 'ARID1A', 'score': 11.39}, {'connected_gene': 'SFN', 'score': 10.89}, {'connected_gene': 'ENSG00000226698', 'score': 10.37}, {'connected_gene': 'GPATCH3', 'score': 10.14}, {'connected_gene': 'RPS6KA1', 'score': 10.05}, {'connected_gene': 'NUDC', 'score': 9.63}, {'connected_gene': 'HMGN2', 'score': 9.08}, {'connected_gene': 'ZDHHC18', 'score': 8.32}, {'connected_gene': 'LOC101928728', 'score': 0.2}]
chr1 GH01I026764 26764143 26765140 0.2 [{'connected_gene': 'GC01P026765', 'score': 550.77}, {'connected_gene': 'PIGV', 'score': 12.0}, {'connected_gene': 'SFN', 'score': 10.89}, {'connected_gene': 'ENSG00000226698', 'score': 10.47}, {'connected_gene': 'GPATCH3', 'score': 10.23}, {'connected_gene': 'NUDC', 'score': 10.23}, {'connected_gene': 'HMGN2', 'score': 9.08}, {'connected_gene': 'KDF1', 'score': 4.81}, {'connected_gene': 'ARID1A', 'score': 0.19}]
chr1 GH01I026793 26793535 26795850 0.49 [{'connected_gene': 'PIR59173', 'score': 550.77}, {'connected_gene': 'GC01P026802', 'score': 550.77}, {'connected_gene': 'PIR58697', 'score': 550.77}, {'connected_gene': 'GC01P026804', 'score': 550.77}, {'connected_gene': 'PIGV', 'score': 14.85}, {'connected_gene': 'SFN', 'score': 11.41}, {'connected_gene': 'ENSG00000226698', 'score': 11.39}, {'connected_gene': 'MIR1976', 'score': 10.74}, {'connected_gene': 'RPS6KA1', 'score': 10.74}, {'connected_gene': 'GPATCH3', 'score': 10.63}, {'connected_gene': 'NUDC', 'score': 10.63}, {'connected_gene': 'HMGN2', 'score': 9.41}]
chr1 GH01I026798 26798815 26801846 1.26 [{'connected_gene': 'GC01P026805', 'score': 550.77}, {'connected_gene': 'SFN', 'score': 11.68}, {'connected_gene': 'ENSG00000226698', 'score': 11.38}, {'connected_gene': 'GPATCH3', 'score': 10.6}, {'connected_gene': 'NUDC', 'score': 10.53}, {'connected_gene': 'MIR1976', 'score': 10.24}, {'connected_gene': 'RPS6KA1', 'score': 10.23}, {'connected_gene': 'STMN1', 'score': 9.93}, {'connected_gene': 'HMGN2', 'score': 9.19}, {'connected_gene': 'PIR59173', 'score': 0.44}, {'connected_gene': 'GC01P026802', 'score': 0.44}]

© 2018 bmi.sjtu.edu.cn. All rights reserved.
浙ICP备18030141号.