PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000297579	[[104426941, 104427744], [104432491, 104432691], [104433202, 104433310], [104438283, 104438373], [104439324, 104439480], [104442839, 104442917], [104444886, 104444969], [104447853, 104448018], [104452363, 104452499], [104453682, 104453846], [104455022, 104455681]]	[[104427218, 104427744], [104432491, 104432691], [104433202, 104433310], [104438283, 104438373], [104439324, 104439480], [104442839, 104442917], [104444886, 104444969], [104447853, 104448018], [104452363, 104452499], [104453682, 104453846], [104455022, 104455110]]
ENST00000521716	[[104427592, 104427744], [104432491, 104432876]]	[[104427686, 104427744], [104432491, 104432724]]
ENST00000521971	[[104427606, 104427744], [104432491, 104432691], [104438283, 104438373], [104439324, 104440945]]	[[104427686, 104427744], [104432491, 104432691], [104438283, 104438373], [104439324, 104439522]]
ENST00000521999	[[104427612, 104427744], [104438283, 104438373], [104439324, 104439480], [104442839, 104442917], [104444886, 104444969], [104447853, 104448018], [104452363, 104452504]]	None
ENST00000519682	[[104427639, 104427744], [104432491, 104432691], [104433202, 104433310], [104438283, 104438373], [104439324, 104439658]]	[[104427686, 104427744], [104432491, 104432691], [104433202, 104433310], [104438283, 104438373], [104439324, 104439522]]
ENST00000518554	[[104427639, 104427744], [104432491, 104432691], [104433202, 104433310], [104438283, 104438373], [104439324, 104442917], [104444886, 104444969], [104447853, 104448018], [104452363, 104452499], [104453682, 104453846], [104455022, 104455678]]	None
NM_015420	[[104426941, 104427744], [104432491, 104432691], [104433202, 104433310], [104438283, 104438373], [104439324, 104439480], [104442839, 104442917], [104444886, 104444969], [104447853, 104448018], [104452363, 104452499], [104453682, 104453846], [104455022, 104455681]]	[[104427218, 104427744], [104432491, 104432691], [104433202, 104433310], [104438283, 104438373], [104439324, 104439480], [104442839, 104442917], [104444886, 104444969], [104447853, 104448018], [104452363, 104452499], [104453682, 104453846], [104455022, 104455110]]

Promoter

Chrom	Start	End	Description
chr8	104427080	104427102	CAGE_peak_3_at_DCAF13_5end
chr8	104427581	104427677	CAGE_peak_1_at_DCAF13_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I103346	103346871	103350549	1.23	[{'connected_gene': 'FZD6', 'score': 24.14}, {'connected_gene': 'CTHRC1', 'score': 19.26}, {'connected_gene': 'BAALC-AS1', 'score': 15.04}, {'connected_gene': 'RNU6-1011P', 'score': 11.8}, {'connected_gene': 'LINC01181', 'score': 9.67}, {'connected_gene': 'DCAF13', 'score': 5.79}, {'connected_gene': 'ENSG00000266289', 'score': 5.14}, {'connected_gene': 'ATP6V1C1', 'score': 2.31}, {'connected_gene': 'AZIN1', 'score': 2.16}, {'connected_gene': 'SLC25A32', 'score': 1.42}, {'connected_gene': 'GC08P103357', 'score': 0.44}, {'connected_gene': 'GC08P103328', 'score': 0.34}]
chr8	GH08I103297	103297819	103300382	1.89	[{'connected_gene': 'FZD6', 'score': 565.11}, {'connected_gene': 'LOC105369147', 'score': 550.77}, {'connected_gene': 'BAALC-AS1', 'score': 550.77}, {'connected_gene': 'UBR5', 'score': 11.39}, {'connected_gene': 'CTHRC1', 'score': 6.68}, {'connected_gene': 'ENSG00000266289', 'score': 5.84}, {'connected_gene': 'DCAF13', 'score': 4.53}, {'connected_gene': 'GC08P103328', 'score': 0.31}]
chr8	GH08I103323	103323642	103327224	0.43	[{'connected_gene': 'FZD6', 'score': 26.58}, {'connected_gene': 'BAALC-AS1', 'score': 11.89}, {'connected_gene': 'RNU6-1011P', 'score': 11.55}, {'connected_gene': 'DCAF13', 'score': 11.22}, {'connected_gene': 'SLC25A32', 'score': 11.22}, {'connected_gene': 'CTHRC1', 'score': 6.47}, {'connected_gene': 'GC08P103328', 'score': 0.77}]
chr8	GH08I103080	103080862	103081052	0.3	[{'connected_gene': 'KLF10', 'score': 12.34}, {'connected_gene': 'LINC01181', 'score': 10.81}, {'connected_gene': 'ATP6V1C1', 'score': 7.79}, {'connected_gene': 'AZIN1', 'score': 4.06}, {'connected_gene': 'SLC25A32', 'score': 1.91}, {'connected_gene': 'DCAF13', 'score': 1.4}, {'connected_gene': 'MTND1P5', 'score': 0.77}, {'connected_gene': 'PIR47023', 'score': 0.39}]
chr8	GH08I102803	102803965	102811559	1.85	[{'connected_gene': 'UBR5', 'score': 42.1}, {'connected_gene': 'ENSG00000272037', 'score': 21.79}, {'connected_gene': 'KLF10', 'score': 13.16}, {'connected_gene': 'FZD6', 'score': 13.14}, {'connected_gene': 'SLC25A32', 'score': 12.11}, {'connected_gene': 'DCAF13', 'score': 11.55}, {'connected_gene': 'GASAL1', 'score': 11.5}, {'connected_gene': 'AZIN1', 'score': 5.43}, {'connected_gene': 'ENSG00000253385', 'score': 0.25}]
chr8	GH08I102727	102727598	102732313	1.66	[{'connected_gene': 'UBR5', 'score': 14.57}, {'connected_gene': 'DCAF13', 'score': 10.32}, {'connected_gene': 'ENSG00000272037', 'score': 9.93}, {'connected_gene': 'FZD6', 'score': 9.72}, {'connected_gene': 'ADI1P2', 'score': 0.26}, {'connected_gene': 'GC08P102794', 'score': 0.21}, {'connected_gene': 'LOC101927245', 'score': 0.18}]
chr8	GH08I103405	103405778	103407393	0.76	[{'connected_gene': 'DCAF13', 'score': 14.6}, {'connected_gene': 'FZD6', 'score': 12.46}, {'connected_gene': 'CTHRC1', 'score': 11.45}, {'connected_gene': 'RNU6-1011P', 'score': 11.13}, {'connected_gene': 'LINC01181', 'score': 9.61}, {'connected_gene': 'SLC25A32', 'score': 6.83}, {'connected_gene': 'PIR39755', 'score': 0.39}]
chr8	GH08I103413	103413594	103416798	2.11	[{'connected_gene': 'DCAF13', 'score': 565.45}, {'connected_gene': 'SLC25A32', 'score': 550.77}, {'connected_gene': 'FZD6', 'score': 12.13}]
chr8	GH08I103512	103512133	103512322	0.69	[{'connected_gene': 'DCAF13', 'score': 11.59}, {'connected_gene': 'SLC25A32', 'score': 11.59}, {'connected_gene': 'LINC01181', 'score': 10.13}, {'connected_gene': 'FZD6', 'score': 10.1}, {'connected_gene': 'BAALC-AS1', 'score': 10.1}, {'connected_gene': 'RIMS2', 'score': 0.39}, {'connected_gene': 'LOC105375690', 'score': 0.39}, {'connected_gene': 'ENSG00000255105', 'score': 0.25}]
chr8	GH08I103444	103444630	103446488	0.89	[{'connected_gene': 'DCAF13', 'score': 26.7}, {'connected_gene': 'SLC25A32', 'score': 12.4}, {'connected_gene': 'RNU6-1011P', 'score': 10.42}, {'connected_gene': 'ENSG00000266289', 'score': 8.73}, {'connected_gene': 'ENSG00000261670', 'score': 0.37}]
chr8	GH08I103419	103419601	103420200	0.2	[{'connected_gene': 'DCAF13', 'score': 11.59}, {'connected_gene': 'SLC25A32', 'score': 0.77}, {'connected_gene': 'ENSG00000261670', 'score': 0.26}]
chr8	GH08I103183	103183244	103187809	1.37	[{'connected_gene': 'BAALC-AS2', 'score': 11.7}, {'connected_gene': 'ENSG00000253851', 'score': 10.82}, {'connected_gene': 'LINC01181', 'score': 10.48}, {'connected_gene': 'FZD6', 'score': 6.98}, {'connected_gene': 'DCAF13', 'score': 5.06}, {'connected_gene': 'ENSG00000266289', 'score': 4.68}, {'connected_gene': 'BAALC', 'score': 4.49}, {'connected_gene': 'AZIN1', 'score': 2.53}, {'connected_gene': 'MIR3151', 'score': 0.29}, {'connected_gene': 'PIR39342', 'score': 0.28}, {'connected_gene': 'BAALC-AS1', 'score': 0.14}]
chr8	GH08I103342	103342818	103346479	0.99	[{'connected_gene': 'CTHRC1', 'score': 19.4}, {'connected_gene': 'FZD6', 'score': 13.41}, {'connected_gene': 'DCAF13', 'score': 5.73}, {'connected_gene': 'ENSG00000266289', 'score': 5.27}, {'connected_gene': 'BAALC-AS1', 'score': 4.27}, {'connected_gene': 'GC08P103357', 'score': 0.39}, {'connected_gene': 'GC08P103328', 'score': 0.37}]
chr8	GH08I103371	103371001	103373806	2.32	[{'connected_gene': 'CTHRC1', 'score': 555.11}, {'connected_gene': 'DCAF13', 'score': 15.55}, {'connected_gene': 'FZD6', 'score': 10.69}, {'connected_gene': 'BAALC-AS1', 'score': 10.69}, {'connected_gene': 'LINC01181', 'score': 9.19}, {'connected_gene': 'SLC25A32', 'score': 4.54}, {'connected_gene': 'ENSG00000266289', 'score': 0.39}, {'connected_gene': 'GC08P103328', 'score': 0.26}]
chr8	GH08I102977	102977911	102981400	1.23	[{'connected_gene': 'ENSG00000254281', 'score': 550.77}, {'connected_gene': 'KLF10', 'score': 10.52}, {'connected_gene': 'AZIN1', 'score': 6.79}, {'connected_gene': 'ATP6V1C1', 'score': 4.09}, {'connected_gene': 'DCAF13', 'score': 1.93}, {'connected_gene': 'SLC25A32', 'score': 1.57}, {'connected_gene': 'GC08P103006', 'score': 0.31}]