PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000367846	[[167885966, 167887597], [167889216, 167889328], [167889784, 167889869], [167893734, 167893775], [167904970, 167905278]]	[[167887560, 167887597], [167889216, 167889328], [167889784, 167889869], [167893734, 167893775], [167904970, 167905079]]
ENST00000271373	[[167887305, 167887597], [167889216, 167889328], [167889784, 167889869], [167893734, 167893775], [167904970, 167905136], [167906176, 167906278]]	[[167887560, 167887597], [167889216, 167889328], [167889784, 167889869], [167893734, 167893775], [167904970, 167905079]]
ENST00000458574	[[167889248, 167889328], [167889784, 167889869], [167893734, 167893775], [167904970, 167905136], [167905770, 167906043]]	[[167889248, 167889328], [167889784, 167889869], [167893734, 167893775], [167904970, 167905079]]
NR_026550	[[167885912, 167887597], [167889216, 167889328], [167889784, 167889869], [167893734, 167893775], [167904970, 167905439]]	None
NM_001143674	[[167885912, 167887597], [167889216, 167889328], [167889784, 167889869], [167893734, 167893775], [167904970, 167905136], [167906176, 167906307]]	[[167887560, 167887597], [167889216, 167889328], [167889784, 167889869], [167893734, 167893775], [167904970, 167905079]]
NM_015415	[[167885912, 167887597], [167889216, 167889328], [167889784, 167889869], [167893734, 167893775], [167904970, 167905136], [167906242, 167906307]]	[[167887560, 167887597], [167889216, 167889328], [167889784, 167889869], [167893734, 167893775], [167904970, 167905079]]

Promoter

Chrom	Start	End	Description
chr1	167905225	167905296	CAGE_peak_1_at_BRP44_5end
chr1	167905325	167905336	CAGE_peak_2_at_BRP44_5end
chr1	167905338	167905343	CAGE_peak_6_at_BRP44_5end
chr1	167905363	167905364	CAGE_peak_12_at_BRP44_5end
chr1	167905372	167905384	CAGE_peak_5_at_BRP44_5end
chr1	167905389	167905396	CAGE_peak_10_at_BRP44_5end
chr1	167905427	167905436	CAGE_peak_11_at_BRP44_5end
chr1	167906020	167906058	CAGE_peak_7_at_BRP44_5end
chr1	167906241	167906264	CAGE_peak_9_at_BRP44_5end
chr1	167906270	167906273	CAGE_peak_17_at_BRP44_5end
chr1	167906277	167906324	CAGE_peak_4_at_BRP44_5end
chr1	167906329	167906345	CAGE_peak_13_at_BRP44_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I167924	167924236	167925229	0.72	[{'connected_gene': 'DCAF6', 'score': 8.03}, {'connected_gene': 'ADCY10', 'score': 0.44}, {'connected_gene': 'MPC2', 'score': 0.39}]
chr1	GH01I167904	167904223	167905665	1.46	[{'connected_gene': 'ADCY10', 'score': 550.39}, {'connected_gene': 'MPC2', 'score': 20.23}, {'connected_gene': 'DCAF6', 'score': 11.25}, {'connected_gene': 'ENSG00000232194', 'score': 11.04}, {'connected_gene': 'ENSG00000250762', 'score': 11.04}, {'connected_gene': 'GC01P167854', 'score': 0.23}]
chr1	GH01I167923	167922183	167922332	0.69	[{'connected_gene': 'ADCY10', 'score': 0.44}, {'connected_gene': 'MPC2', 'score': 0.39}, {'connected_gene': 'DCAF6', 'score': 0.39}]
chr1	GH01I167915	167915530	167918258	1.05	[{'connected_gene': 'ADCY10', 'score': 550.77}, {'connected_gene': 'MPC2', 'score': 9.93}, {'connected_gene': 'DCAF6', 'score': 0.37}]
chr1	GH01I167922	167922565	167923684	1.02	[{'connected_gene': 'ADCY10', 'score': 0.44}, {'connected_gene': 'MPC2', 'score': 0.39}, {'connected_gene': 'DCAF6', 'score': 0.39}]
chr1	GH01I167946	167946828	167947844	0.49	[{'connected_gene': 'ADCY10', 'score': 11.5}, {'connected_gene': 'MPC2', 'score': 8.47}, {'connected_gene': 'DCAF6', 'score': 0.39}, {'connected_gene': 'GC01P167995', 'score': 0.25}]
chr1	GH01I167875	167875160	167875832	0.46	[{'connected_gene': 'ADCY10', 'score': 11.29}, {'connected_gene': 'MPC2', 'score': 7.26}, {'connected_gene': 'TIPRL', 'score': 4.72}, {'connected_gene': 'GC01P167854', 'score': 0.34}]
chr1	GH01I167985	167985002	167985169	1.09	[{'connected_gene': 'POU2F1', 'score': 81.09}, {'connected_gene': 'MPZL1', 'score': 24.71}, {'connected_gene': 'ENSG00000272205', 'score': 10.9}, {'connected_gene': 'ADCY10', 'score': 10.47}, {'connected_gene': 'MPC2', 'score': 8.06}, {'connected_gene': 'RCSD1', 'score': 1.28}, {'connected_gene': 'GC01P167995', 'score': 0.39}, {'connected_gene': 'DCAF6', 'score': 0.25}]
chr1	GH01I168177	168177846	168180792	2.37	[{'connected_gene': 'TIPRL', 'score': 561.68}, {'connected_gene': 'MPZL1', 'score': 31.53}, {'connected_gene': 'POU2F1', 'score': 10.39}, {'connected_gene': 'GPR161', 'score': 7.47}, {'connected_gene': 'MPC2', 'score': 5.24}, {'connected_gene': 'RPL34P1', 'score': 0.29}, {'connected_gene': 'GC01M168113', 'score': 0.08}]
chr1	GH01I168202	168202530	168204098	0.94	[{'connected_gene': 'TIPRL', 'score': 23.65}, {'connected_gene': 'SFT2D2', 'score': 12.49}, {'connected_gene': 'MPC2', 'score': 5.35}, {'connected_gene': 'RPL34P1', 'score': 0.44}, {'connected_gene': 'GC01M168113', 'score': 0.08}]
chr1	GH01I167933	167933667	167939419	2.34	[{'connected_gene': 'MPC2', 'score': 559.97}, {'connected_gene': 'DCAF6', 'score': 550.77}, {'connected_gene': 'MPZL1', 'score': 41.99}, {'connected_gene': 'POU2F1', 'score': 10.98}, {'connected_gene': 'DPT', 'score': 10.11}]
chr1	GH01I167911	167911401	167911600	0.2	[{'connected_gene': 'MPC2', 'score': 19.18}, {'connected_gene': 'DCAF6', 'score': 11.26}, {'connected_gene': 'ADCY10', 'score': 0.77}, {'connected_gene': 'GC01P167854', 'score': 0.22}]
chr1	GH01I167925	167925746	167930934	1.42	[{'connected_gene': 'MPC2', 'score': 9.68}, {'connected_gene': 'DCAF6', 'score': 0.44}, {'connected_gene': 'ADCY10', 'score': 0.39}]
chr1	GH01I167912	167912323	167912472	0.46	[{'connected_gene': 'MPC2', 'score': 11.26}, {'connected_gene': 'DCAF6', 'score': 11.26}, {'connected_gene': 'ADCY10', 'score': 0.77}, {'connected_gene': 'GC01P167854', 'score': 0.22}]
chr1	GH01I167829	167829738	167831161	0.8	[{'connected_gene': 'MPC2', 'score': 5.9}, {'connected_gene': 'ENSG00000232194', 'score': 0.39}, {'connected_gene': 'GC01P167854', 'score': 0.34}, {'connected_gene': 'ADCY10', 'score': 0.17}]
chr1	GH01I168121	168121072	168122352	1.01	[{'connected_gene': 'GPR161', 'score': 550.37}, {'connected_gene': 'TBX19', 'score': 9.3}, {'connected_gene': 'MPC2', 'score': 7.87}, {'connected_gene': 'TIPRL', 'score': 4.93}, {'connected_gene': 'GC01M168079', 'score': 0.26}, {'connected_gene': 'GC01M168113', 'score': 0.06}]
chr1	GH01I168135	168135589	168137870	1.87	[{'connected_gene': 'GPR161', 'score': 550.77}, {'connected_gene': 'TIPRL', 'score': 19.96}, {'connected_gene': 'SFT2D2', 'score': 10.47}, {'connected_gene': 'MPC2', 'score': 6.69}, {'connected_gene': 'GC01M168079', 'score': 0.22}, {'connected_gene': 'GC01M168113', 'score': 0.07}]
chr1	GH01I167865	167865729	167867361	0.92	[{'connected_gene': 'DUTP6', 'score': 11.95}, {'connected_gene': 'ENSG00000232194', 'score': 11.2}, {'connected_gene': 'ENSG00000250762', 'score': 11.2}, {'connected_gene': 'ADCY10', 'score': 10.88}, {'connected_gene': 'MPZL1', 'score': 10.78}, {'connected_gene': 'MPC2', 'score': 4.74}, {'connected_gene': 'CREG1', 'score': 4.69}, {'connected_gene': 'GC01P167854', 'score': 0.39}]
chr1	GH01I168056	168056201	168056601	0.5	[{'connected_gene': 'GCSHP5', 'score': 550.77}, {'connected_gene': 'MPC2', 'score': 5.55}, {'connected_gene': 'MIR1255B2', 'score': 0.22}, {'connected_gene': 'DCAF6', 'score': 0.13}]
chr1	GH01I168079	168079329	168082917	1.27	[{'connected_gene': 'GC01M168079', 'score': 550.77}, {'connected_gene': 'MPC2', 'score': 7.25}, {'connected_gene': 'SFT2D2', 'score': 1.52}, {'connected_gene': 'GPR161', 'score': 0.22}]