PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr3	137906119	137906153	CAGE_peak_3_at_ARMC8_5end
chr3	137906154	137906191	CAGE_peak_2_at_ARMC8_5end
chr3	137906353	137906402	CAGE_peak_1_at_ARMC8_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I139118	139118713	139122978	1.33	[{'connected_gene': 'BPESC1', 'score': 6.91}, {'connected_gene': 'ARMC8', 'score': 5.21}, {'connected_gene': 'GC03M139047', 'score': 0.31}, {'connected_gene': 'MRPS22', 'score': 0.13}]
chr3	GH03I138281	138281444	138282854	0.38	[{'connected_gene': 'NME9', 'score': 11.78}, {'connected_gene': 'DBR1', 'score': 11.36}, {'connected_gene': 'DZIP1L', 'score': 10.47}, {'connected_gene': 'GC03P138286', 'score': 0.77}, {'connected_gene': 'ARMC8', 'score': 0.16}]
chr3	GH03I138221	138221801	138223000	0.51	[{'connected_gene': 'ARMC8', 'score': 12.3}, {'connected_gene': 'DBR1', 'score': 12.14}, {'connected_gene': 'MRAS', 'score': 10.32}, {'connected_gene': 'NME9', 'score': 10.3}, {'connected_gene': 'DZIP1L', 'score': 9.58}, {'connected_gene': 'GC03P138286', 'score': 0.21}]
chr3	GH03I138219	138219385	138219553	0.37	[{'connected_gene': 'ARMC8', 'score': 13.62}, {'connected_gene': 'DBR1', 'score': 12.16}, {'connected_gene': 'DZIP1L', 'score': 9.58}, {'connected_gene': 'GC03P138286', 'score': 0.2}]
chr3	GH03I138186	138186259	138189296	2.04	[{'connected_gene': 'ARMC8', 'score': 550.77}, {'connected_gene': 'MRAS', 'score': 12.2}, {'connected_gene': 'CEP70', 'score': 11.64}, {'connected_gene': 'A4GNT', 'score': 4.1}, {'connected_gene': 'GC03P138286', 'score': 0.15}]
chr3	GH03I138199	138199469	138201461	0.83	[{'connected_gene': 'ARMC8', 'score': 0.39}, {'connected_gene': 'GC03P138286', 'score': 0.17}]
chr3	GH03I138645	138645919	138646518	0.57	[{'connected_gene': 'PPIAP72', 'score': 550.77}, {'connected_gene': 'GC03P138644', 'score': 550.77}, {'connected_gene': 'FAIM', 'score': 9.51}, {'connected_gene': 'ARMC8', 'score': 1.51}, {'connected_gene': 'PIK3CB', 'score': 1.31}, {'connected_gene': 'GAPDHP39', 'score': 0.12}]
chr3	GH03I138253	138253883	138255068	0.38	[{'connected_gene': 'GC03P138286', 'score': 0.29}, {'connected_gene': 'ARMC8', 'score': 0.2}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000481646	[[137906108, 137906441], [137907296, 137907372], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138015391]]	[[137907369, 137907372], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138014734]]
ENST00000469044	[[137906125, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138017231]]	[[137906396, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138014734]]
ENST00000491704	[[137906142, 137906441], [137907296, 137907372], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138015236]]	[[137940771, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138014734]]
ENST00000461600	[[137906146, 137906196], [137906310, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953942]]	[[137906396, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953942]]
ENST00000466749	[[137906159, 137906441], [137907242, 137907372], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947841]]	[[137940771, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947841]]
ENST00000358441	[[137906183, 137906441], [137907242, 137907372], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137965729]]	[[137907369, 137907372], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964091]]
ENST00000489213	[[137906191, 137906441], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964477]]	[[137940771, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964091]]
ENST00000461822	[[137906358, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138015096]]	[[137906396, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138014734]]
ENST00000485396	[[137906369, 137906441], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138014775]]	[[137940771, 137940839], [137942230, 137942373], [137942477, 137942575], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138014734]]
ENST00000471453	[[137906370, 137906441], [137907296, 137907372], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137965699]]	[[137907369, 137907372], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964091]]
ENST00000470821	[[137906372, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964523]]	[[137906396, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964091]]
ENST00000471709	[[137906388, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414]]	[[137906396, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414]]
ENST00000538260	[[137906389, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138015263]]	[[137906396, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138014734]]
ENST00000393058	[[137906389, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138015263]]	[[137906426, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138014734]]
ENST00000463485	[[137906393, 137906441], [137940767, 137940839], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986071]]	[[137906396, 137906441], [137940767, 137940839], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986071]]
ENST00000468560	[[137906617, 137907372], [137928658, 137928732]]	[[137907369, 137907372], [137928658, 137928732]]
ENST00000470842	[[137942230, 137942373], [137942477, 137942575], [137947759, 137947893]]	None
ENST00000470549	[[137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137958309, 137958370], [137963929, 137964172]]	[[137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137958309, 137958314]]
ENST00000469860	[[137942477, 137942575], [137953875, 137953956], [137963929, 137964524]]	[[137942477, 137942575], [137953875, 137953956], [137963929, 137964091]]
ENST00000460495	[[137956120, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138015383]]	None
ENST00000486832	[[137956861, 137958370], [137960624, 137960825], [137963929, 137965314]]	None
ENST00000466762	[[137982352, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138017215]]	None
ENST00000464181	[[137991921, 137991958], [137993290, 137993386], [138003272, 138003368], [138006473, 138006856]]	[[137991921, 137991958], [137993290, 137993386], [138003272, 138003368], [138006473, 138006515]]
ENST00000494015	[[138007862, 138007962], [138009387, 138009470]]	None
NM_014154	[[137906089, 137906441], [137907296, 137907372], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137965729]]	[[137907369, 137907372], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964091]]
NM_213654	[[137906089, 137906441], [137907242, 137907372], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137965729]]	[[137907369, 137907372], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964091]]
NM_001282342	[[137906089, 137906441], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138017231]]	[[137940771, 137940839], [137942230, 137942373], [137942477, 137942575], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138014734]]
NM_001267041	[[137906089, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138017231]]	[[137906396, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138014734]]
NM_001267042	[[137906089, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138017231]]	[[137906396, 137906441], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138014734]]
NM_015396	[[137906089, 137906441], [137907296, 137907372], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138017231]]	[[137907369, 137907372], [137928658, 137928735], [137940767, 137940839], [137942230, 137942373], [137942477, 137942575], [137947759, 137947852], [137953875, 137953956], [137956150, 137956226], [137956323, 137956414], [137958309, 137958370], [137960624, 137960825], [137963929, 137964025], [137982580, 137982663], [137982972, 137983054], [137985996, 137986083], [137988881, 137988974], [137991808, 137991958], [137993290, 137993386], [138003272, 138003368], [138007889, 138007962], [138009387, 138009481], [138014700, 138014734]]