PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000376261	[[26505235, 26505814], [26506538, 26506598], [26506770, 26506920], [26507971, 26508205], [26512815, 26512906], [26513467, 26513580], [26518590, 26518706], [26534849, 26534929], [26558047, 26558102], [26559568, 26559685], [26562564, 26562629], [26569937, 26570016], [26575273, 26575423], [26581393, 26581501], [26581830, 26581920], [26589716, 26593487]]	[[26505738, 26505814], [26506538, 26506598], [26506770, 26506920], [26507971, 26508205], [26512815, 26512906], [26513467, 26513580], [26518590, 26518706], [26534849, 26534929], [26558047, 26558102], [26559568, 26559685], [26562564, 26562629], [26569937, 26570016], [26575273, 26575423], [26581393, 26581501], [26581830, 26581920], [26589716, 26589890]]
ENST00000259271	[[26505593, 26505814], [26506538, 26506598], [26506770, 26506920], [26507971, 26508205], [26512815, 26512906], [26513467, 26513580], [26518590, 26518706], [26534849, 26534929], [26558047, 26558102], [26559568, 26559685], [26562564, 26562629], [26569937, 26570016], [26575273, 26575423], [26581393, 26581501], [26581830, 26581920], [26589716, 26589924], [26592962, 26593487]]	[[26505738, 26505814], [26506538, 26506598], [26506770, 26506920], [26507971, 26508205], [26512815, 26512906], [26513467, 26513580], [26518590, 26518706], [26534849, 26534929], [26558047, 26558102], [26559568, 26559685], [26562564, 26562629], [26569937, 26570016], [26575273, 26575423], [26581393, 26581501], [26581830, 26581920], [26589716, 26589890]]
ENST00000428517	[[26505661, 26505814], [26506538, 26506598], [26506770, 26506920], [26507971, 26508249]]	[[26505738, 26505814], [26506538, 26506598], [26506770, 26506920], [26507971, 26508249]]
ENST00000376248	[[26507121, 26507254], [26507971, 26508205], [26512815, 26512906], [26513467, 26513689]]	[[26508027, 26508205], [26512815, 26512906], [26513467, 26513588]]
NM_001134366	[[26505235, 26505814], [26506538, 26506598], [26506770, 26506920], [26507971, 26508205], [26512815, 26512906], [26513467, 26513580], [26518590, 26518706], [26534849, 26534929], [26558047, 26558102], [26559568, 26559685], [26562564, 26562629], [26569937, 26570016], [26575273, 26575423], [26581393, 26581501], [26581830, 26581920], [26589716, 26590048]]	[[26505738, 26505814], [26506538, 26506598], [26506770, 26506920], [26507971, 26508205], [26512815, 26512906], [26513467, 26513580], [26518590, 26518706], [26534849, 26534929], [26558047, 26558102], [26559568, 26559685], [26562564, 26562629], [26569937, 26570016], [26575273, 26575423], [26581393, 26581501], [26581830, 26581920], [26589716, 26589890]]
NM_000818	[[26505235, 26505814], [26506538, 26506598], [26506770, 26506920], [26507971, 26508205], [26512815, 26512906], [26513467, 26513580], [26518590, 26518706], [26534849, 26534929], [26558047, 26558102], [26559568, 26559685], [26562564, 26562629], [26569937, 26570016], [26575273, 26575423], [26581393, 26581501], [26581830, 26581920], [26589716, 26589924], [26592962, 26593491]]	[[26505738, 26505814], [26506538, 26506598], [26506770, 26506920], [26507971, 26508205], [26512815, 26512906], [26513467, 26513580], [26518590, 26518706], [26534849, 26534929], [26558047, 26558102], [26559568, 26559685], [26562564, 26562629], [26569937, 26570016], [26575273, 26575423], [26581393, 26581501], [26581830, 26581920], [26589716, 26589890]]

Promoter

Chrom	Start	End	Description
chr10	26505179	26505186	CAGE_peak_13_at_GAD2_5end
chr10	26505290	26505312	CAGE_peak_4_at_GAD2_5end
chr10	26505329	26505346	CAGE_peak_6_at_GAD2_5end
chr10	26505387	26505457	CAGE_peak_2_at_GAD2_5end
chr10	26505642	26505653	CAGE_peak_5_at_GAD2_5end
chr10	26505670	26505692	CAGE_peak_3_at_GAD2_5end
chr10	26505695	26505714	CAGE_peak_1_at_GAD2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I026000	26000970	26001166	0.23	[{'connected_gene': 'MYO3A', 'score': 15.42}, {'connected_gene': 'GAD2', 'score': 2.5}, {'connected_gene': 'GC10P025995', 'score': 0.44}, {'connected_gene': 'GC10P026192', 'score': 0.08}]
chr10	GH10I025933	25933720	25935132	1.9	[{'connected_gene': 'MYO3A', 'score': 581.65}, {'connected_gene': 'LOC101929073', 'score': 550.77}, {'connected_gene': 'GAD2', 'score': 4.91}, {'connected_gene': 'GC10P025995', 'score': 0.21}]
chr10	GH10I026213	26213880	26214981	0.6	[{'connected_gene': 'GAD2', 'score': 554.17}, {'connected_gene': 'GC10M026212', 'score': 550.77}, {'connected_gene': 'MYO3A', 'score': 1.96}, {'connected_gene': 'GC10P026192', 'score': 0.34}]
chr10	GH10I026284	26284570	26284589	0.22	[{'connected_gene': 'GAD2', 'score': 2.6}, {'connected_gene': 'GC10P026297', 'score': 0.39}]
chr10	GH10I026277	26277993	26278126	0.34	[{'connected_gene': 'GAD2', 'score': 1.69}, {'connected_gene': 'GC10P026297', 'score': 0.37}]
chr10	GH10I026218	26218072	26218221	0.43	[{'connected_gene': 'GC10M026212', 'score': 550.77}, {'connected_gene': 'GAD2', 'score': 550.77}, {'connected_gene': 'GC10P026297', 'score': 0.18}]
chr10	GH10I026216	26216252	26216401	1.26	[{'connected_gene': 'GC10M026212', 'score': 550.77}, {'connected_gene': 'GAD2', 'score': 550.77}, {'connected_gene': 'GC10P026297', 'score': 0.18}]
chr10	GH10I026217	26217852	26217941	0.46	[{'connected_gene': 'GC10M026212', 'score': 550.77}, {'connected_gene': 'GAD2', 'score': 550.77}, {'connected_gene': 'GC10P026297', 'score': 0.18}]
chr10	GH10I026219	26216725	26216784	0.84	[{'connected_gene': 'GC10M026212', 'score': 550.77}, {'connected_gene': 'GAD2', 'score': 550.77}, {'connected_gene': 'GC10P026297', 'score': 0.18}]
chr10	GH10I026215	26215112	26215261	0.43	[{'connected_gene': 'GC10M026212', 'score': 550.77}, {'connected_gene': 'GAD2', 'score': 550.77}, {'connected_gene': 'GC10P026192', 'score': 0.34}]