PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000314891	[[34651105, 34651503], [34651789, 34651946], [34652311, 34652410], [34653600, 34653733], [34654396, 34654522], [34654773, 34654856], [34654982, 34655037], [34655622, 34655657], [34655861, 34655920], [34656213, 34656274], [34656394, 34656507], [34657208, 34657429], [34657759, 34657902], [34659187, 34659479]]	[[34651327, 34651503], [34651789, 34651946], [34652311, 34652410], [34653600, 34653733], [34654396, 34654522], [34654773, 34654856], [34654982, 34655037], [34655622, 34655657], [34655861, 34655920], [34656213, 34656274], [34656394, 34656507], [34657208, 34657429], [34657759, 34657902], [34659187, 34659301]]
ENST00000563748	[[34651109, 34651503], [34651789, 34652410], [34653600, 34653733], [34654396, 34654522], [34654773, 34654856]]	None
ENST00000567507	[[34651296, 34651503], [34651789, 34651946], [34652311, 34652410], [34654396, 34654522], [34654773, 34654856]]	[[34652364, 34652410], [34654396, 34654522], [34654773, 34654856]]
ENST00000563240	[[34653112, 34653733], [34654396, 34654522], [34654773, 34654856], [34654982, 34655091]]	None
ENST00000562404	[[34654779, 34655037], [34655622, 34655941]]	None
ENST00000566581	[[34656146, 34656507], [34657208, 34657429], [34657759, 34657902], [34659187, 34659377]]	None
ENST00000569804	[[34657208, 34657429], [34657759, 34658195]]	None
ENST00000562431	[[34657299, 34657429], [34657759, 34657902], [34659114, 34659182]]	None
NM_153613	[[34651088, 34651503], [34651789, 34651946], [34652311, 34652410], [34653600, 34653733], [34654396, 34654522], [34654773, 34654856], [34654982, 34655037], [34655622, 34655657], [34655861, 34655920], [34656213, 34656274], [34656394, 34656507], [34657208, 34657429], [34657759, 34657902], [34659187, 34659395]]	[[34651327, 34651503], [34651789, 34651946], [34652311, 34652410], [34653600, 34653733], [34654396, 34654522], [34654773, 34654856], [34654982, 34655037], [34655622, 34655657], [34655861, 34655920], [34656213, 34656274], [34656394, 34656507], [34657208, 34657429], [34657759, 34657902], [34659187, 34659301]]

Promoter

Chrom	Start	End	Description
chr15	34657884	34657905	CAGE_peak_3_at_LPCAT4_5end
chr15	34659349	34659405	CAGE_peak_1_at_LPCAT4_5end
chr15	34659906	34659921	CAGE_peak_4_at_LPCAT4_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I034246	34246018	34247411	0.38	[{'connected_gene': 'NOP10', 'score': 51.16}, {'connected_gene': 'SLC12A6', 'score': 11.89}, {'connected_gene': 'NUTM1', 'score': 11.88}, {'connected_gene': 'LPCAT4', 'score': 11.67}, {'connected_gene': 'KATNBL1', 'score': 11.64}, {'connected_gene': 'GOLGA8B', 'score': 4.39}, {'connected_gene': 'ENSG00000259468', 'score': 0.44}, {'connected_gene': 'EMC4', 'score': 0.34}]
chr15	GH15I034346	34346878	34347277	0.23	[{'connected_gene': 'NUTM1', 'score': 0.77}, {'connected_gene': 'LPCAT4', 'score': 0.34}]
chr15	GH15I034364	34364857	34368885	2.02	[{'connected_gene': 'LPCAT4', 'score': 550.77}, {'connected_gene': 'AQR', 'score': 18.15}, {'connected_gene': 'HNRNPLP2', 'score': 12.55}, {'connected_gene': 'ENSG00000259287', 'score': 11.58}, {'connected_gene': 'GOLGA8B', 'score': 6.7}, {'connected_gene': 'GOLGA8A', 'score': 6.24}, {'connected_gene': 'NUTM1', 'score': 0.34}]
chr15	GH15I034359	34359500	34359689	0.2	[{'connected_gene': 'LPCAT4', 'score': 0.44}, {'connected_gene': 'NUTM1', 'score': 0.37}]
chr15	GH15I034361	34361982	34363807	0.31	[{'connected_gene': 'LPCAT4', 'score': 10.98}, {'connected_gene': 'NUTM1', 'score': 0.37}]
chr15	GH15I034360	34360420	34360609	0.67	[{'connected_gene': 'LPCAT4', 'score': 0.44}, {'connected_gene': 'NUTM1', 'score': 0.37}]
chr15	GH15I034369	34369154	34369503	0.2	[{'connected_gene': 'LPCAT4', 'score': 0.77}, {'connected_gene': 'ACTG1P15', 'score': 0.44}]