PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000474155	[[11865337, 11865469], [11893995, 11894214], [11904910, 11905041], [11908529, 11908775]]	None
ENST00000277570	[[11865396, 11865469], [11893995, 11894214], [11908529, 11908782], [11911488, 11914276]]	[[11894076, 11894214], [11908529, 11908782], [11911488, 11912405]]
ENST00000444604	[[11873681, 11873821], [11893995, 11894214], [11908529, 11908646]]	[[11894076, 11894214], [11908529, 11908646]]
ENST00000379200	[[11911642, 11912874]]	[[11911685, 11912405]]
NM_153256	[[11865396, 11865469], [11893995, 11894214], [11908529, 11908782], [11911488, 11914276]]	[[11894076, 11894214], [11908529, 11908782], [11911488, 11912405]]

Promoter

Chrom	Start	End	Description
chr10	11865317	11865332	CAGE_peak_2_at_C10orf47_5end
chr10	11865347	11865411	CAGE_peak_1_at_C10orf47_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I011797	11797478	11800004	0.88	[{'connected_gene': 'ECHDC3', 'score': 17.36}, {'connected_gene': 'UPF2', 'score': 9.84}, {'connected_gene': 'LOC105376415', 'score': 0.39}, {'connected_gene': 'PROSER2', 'score': 0.34}]
chr10	GH10I011809	11809822	11811406	0.75	[{'connected_gene': 'ECHDC3', 'score': 7.28}, {'connected_gene': 'PROSER2', 'score': 0.39}, {'connected_gene': 'LOC105376415', 'score': 0.31}]
chr10	GH10I011793	11793497	11795227	1.22	[{'connected_gene': 'ECHDC3', 'score': 12.64}, {'connected_gene': 'PROSER2', 'score': 6.13}, {'connected_gene': 'LOC105376415', 'score': 0.39}]
chr10	GH10I011879	11879754	11885297	1.54	[{'connected_gene': 'PROSER2', 'score': 16.19}, {'connected_gene': 'PROSER2-AS1', 'score': 14.16}, {'connected_gene': 'RNU6-1095P', 'score': 12.08}, {'connected_gene': 'PIR51291', 'score': 0.44}, {'connected_gene': 'GC10P011876', 'score': 0.44}, {'connected_gene': 'GC10M011887', 'score': 0.44}]
chr10	GH10I011862	11862921	11864409	0.8	[{'connected_gene': 'PROSER2', 'score': 23.21}, {'connected_gene': 'PROSER2-AS1', 'score': 17.75}, {'connected_gene': 'RNU6-1095P', 'score': 11.74}, {'connected_gene': 'GC10P011876', 'score': 0.39}]
chr10	GH10I011849	11849696	11850437	0.38	[{'connected_gene': 'PROSER2', 'score': 10.2}, {'connected_gene': 'GC10P011876', 'score': 0.31}, {'connected_gene': 'PROSER2-AS1', 'score': 0.26}]
chr10	GH10I011819	11819601	11820000	0.69	[{'connected_gene': 'PROSER2', 'score': 0.77}, {'connected_gene': 'LOC105376415', 'score': 0.28}]
chr10	GH10I011814	11814001	11814800	0.83	[{'connected_gene': 'PROSER2', 'score': 0.44}, {'connected_gene': 'LOC105376415', 'score': 0.29}]
chr10	GH10I011820	11820201	11820400	0.62	[{'connected_gene': 'PROSER2', 'score': 0.77}, {'connected_gene': 'LOC105376415', 'score': 0.28}]
chr10	GH10I011900	11900750	11902634	0.85	[{'connected_gene': 'PROSER2', 'score': 8.67}, {'connected_gene': 'PIR36850', 'score': 0.77}, {'connected_gene': 'GC10P011915', 'score': 0.39}]
chr10	GH10I011822	11822762	11824631	1.9	[{'connected_gene': 'PROSER2', 'score': 555.84}, {'connected_gene': 'GC10P011876', 'score': 0.23}]
chr10	GH10I011824	11824883	11825069	1.04	[{'connected_gene': 'PROSER2', 'score': 558.47}, {'connected_gene': 'GC10P011876', 'score': 0.23}]
chr10	GH10I011871	11871371	11871883	0.63	[{'connected_gene': 'PROSER2-AS1', 'score': 25.26}, {'connected_gene': 'PROSER2', 'score': 11.1}, {'connected_gene': 'GC10P011876', 'score': 0.77}]
chr10	GH10I011869	11869336	11870606	0.63	[{'connected_gene': 'PROSER2-AS1', 'score': 23.25}, {'connected_gene': 'PROSER2', 'score': 21.08}, {'connected_gene': 'GC10P011876', 'score': 0.44}]
chr10	GH10I011830	11830170	11833103	1.05	[{'connected_gene': 'PROSER2-AS1', 'score': 17.56}, {'connected_gene': 'RNU6-1095P', 'score': 11.21}, {'connected_gene': 'PROSER2', 'score': 8.48}, {'connected_gene': 'GC10P011876', 'score': 0.26}]
chr10	GH10I011878	11878501	11879306	0.38	[{'connected_gene': 'RNU6-1095P', 'score': 12.03}, {'connected_gene': 'PROSER2-AS1', 'score': 11.38}, {'connected_gene': 'PROSER2', 'score': 7.51}, {'connected_gene': 'GC10P011876', 'score': 0.77}, {'connected_gene': 'PIR51291', 'score': 0.44}, {'connected_gene': 'GC10M011887', 'score': 0.44}]
chr10	GH10I011890	11890920	11892765	0.78	[{'connected_gene': 'GC10P011892', 'score': 550.77}, {'connected_gene': 'ENSG00000228302', 'score': 22.15}, {'connected_gene': 'UPF2', 'score': 19.14}, {'connected_gene': 'PROSER2-AS1', 'score': 14.17}, {'connected_gene': 'PROSER2', 'score': 13.46}, {'connected_gene': 'SEC61A2', 'score': 10.05}, {'connected_gene': 'GC10M011888', 'score': 0.77}, {'connected_gene': 'PIR51152', 'score': 0.77}]
chr10	GH10I011897	11897663	11899664	1.68	[{'connected_gene': 'PIR36850', 'score': 550.77}, {'connected_gene': 'PROSER2', 'score': 26.8}, {'connected_gene': 'UPF2', 'score': 20.45}, {'connected_gene': 'RNU6-1095P', 'score': 12.48}, {'connected_gene': 'ENSG00000228302', 'score': 10.76}, {'connected_gene': 'PROSER2-AS1', 'score': 6.3}, {'connected_gene': 'GC10P011915', 'score': 0.37}]
chr10	GH10I011895	11895333	11895571	0.71	[{'connected_gene': 'PIR36850', 'score': 550.77}, {'connected_gene': 'PROSER2-AS1', 'score': 550.77}, {'connected_gene': 'PROSER2', 'score': 12.44}, {'connected_gene': 'UPF2', 'score': 1.53}, {'connected_gene': 'GC10P011892', 'score': 0.77}]
chr10	GH10I011873	11873741	11878042	1.69	[{'connected_gene': 'GC10P011876', 'score': 550.77}, {'connected_gene': 'PROSER2-AS1', 'score': 12.75}, {'connected_gene': 'RNU6-1095P', 'score': 12.02}, {'connected_gene': 'PROSER2', 'score': 11.72}]
chr10	GH10I011885	11885728	11887634	0.87	[{'connected_gene': 'GC10M011888', 'score': 550.77}, {'connected_gene': 'PIR51291', 'score': 550.77}, {'connected_gene': 'PIR51152', 'score': 550.77}, {'connected_gene': 'GC10M011887', 'score': 550.77}, {'connected_gene': 'RNU6-1095P', 'score': 12.1}, {'connected_gene': 'PROSER2-AS1', 'score': 11.97}, {'connected_gene': 'PROSER2', 'score': 5.18}, {'connected_gene': 'GC10P011876', 'score': 0.39}]