PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000313339	[[38540565, 38541559], [38542308, 38543052], [38543235, 38543360], [38571118, 38571198], [38572002, 38572056], [38573080, 38573126], [38575472, 38575695], [38577049, 38577204]]	[[38543249, 38543360], [38571118, 38571198], [38572002, 38572056], [38573080, 38573126], [38575472, 38575695], [38577049, 38577153]]
ENST00000607974	[[38543249, 38543360], [38543457, 38543493], [38571118, 38571198], [38572002, 38572056], [38573080, 38573126], [38575472, 38575695], [38577049, 38577153]]	[[38543249, 38543360], [38543457, 38543493], [38571118, 38571198], [38572002, 38572056], [38573080, 38573126], [38575472, 38575695], [38577049, 38577153]]
ENST00000602295	[[38571354, 38573126], [38575472, 38575695], [38577049, 38577261], [38577863, 38578145], [38586179, 38586309], [38588547, 38588660], [38593756, 38593906], [38595482, 38595506]]	[[38573054, 38573126], [38575472, 38575695], [38577049, 38577261], [38577863, 38578145], [38586179, 38586309], [38588547, 38588660], [38593756, 38593906], [38595482, 38595506]]
ENST00000399703	[[38571354, 38572056], [38575472, 38575695], [38577049, 38577261], [38577863, 38578145], [38586179, 38586309], [38588547, 38588660], [38593756, 38593906], [38595482, 38596400], [38601127, 38601201], [38603155, 38603209], [38607422, 38607490], [38610269, 38610407], [38611211, 38611318], [38615590, 38615764], [38615926, 38616041], [38620076, 38620657]]	[[38572041, 38572056], [38575472, 38575695], [38577049, 38577261], [38577863, 38578145], [38586179, 38586309], [38588547, 38588660], [38593756, 38593906], [38595482, 38596400], [38601127, 38601201], [38603155, 38603209], [38607422, 38607490], [38610269, 38610407], [38611211, 38611318], [38615590, 38615764], [38615926, 38616041], [38620076, 38620282]]
ENST00000475234	[[38601165, 38601198], [38603155, 38603209], [38604149, 38604284], [38604859, 38604916]]	None
NM_001331100	[[38571360, 38572056], [38575472, 38575695], [38577049, 38577261], [38577863, 38578145], [38586179, 38586309], [38588547, 38588660], [38593756, 38593906], [38595482, 38596400], [38601127, 38601198], [38603155, 38603209], [38604149, 38604284], [38604859, 38604913], [38607422, 38607490], [38610269, 38610407], [38611211, 38611318], [38615590, 38615764], [38615926, 38616041], [38620076, 38620657]]	[[38572041, 38572056], [38575472, 38575695], [38577049, 38577261], [38577863, 38578145], [38586179, 38586309], [38588547, 38588660], [38593756, 38593906], [38595482, 38596400], [38601127, 38601198], [38603155, 38603209], [38604149, 38604284], [38604859, 38604913], [38607422, 38607490], [38610269, 38610407], [38611211, 38611318], [38615590, 38615764], [38615926, 38616041], [38620076, 38620282]]
NM_147195	[[38571360, 38572056], [38575472, 38575695], [38577049, 38577261], [38577863, 38578145], [38586179, 38586309], [38588547, 38588660], [38593756, 38593906], [38595482, 38596400], [38601127, 38601201], [38603155, 38603209], [38607422, 38607490], [38610269, 38610407], [38611211, 38611318], [38615590, 38615764], [38615926, 38616041], [38620076, 38620657]]	[[38572041, 38572056], [38575472, 38575695], [38577049, 38577261], [38577863, 38578145], [38586179, 38586309], [38588547, 38588660], [38593756, 38593906], [38595482, 38596400], [38601127, 38601201], [38603155, 38603209], [38607422, 38607490], [38610269, 38610407], [38611211, 38611318], [38615590, 38615764], [38615926, 38616041], [38620076, 38620282]]

Promoter

Chrom	Start	End	Description
chr9	38620530	38620617	CAGE_peak_1_at_ANKRD18A_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I038478	38478728	38478772	0.33	[{'connected_gene': 'TCEA1P3', 'score': 550.77}, {'connected_gene': 'ANKRD18A', 'score': 1.79}, {'connected_gene': 'PIR43232', 'score': 0.77}, {'connected_gene': 'ENSG00000283162', 'score': 0.25}]
chr9	GH09I038619	38619629	38621601	1.99	[{'connected_gene': 'ANKRD18A', 'score': 562.86}, {'connected_gene': 'FAM201A', 'score': 558.52}, {'connected_gene': 'TRMT10B', 'score': 14.06}, {'connected_gene': 'EXOSC3', 'score': 10.64}]
chr9	GH09I038621	38621904	38622013	0.63	[{'connected_gene': 'ANKRD18A', 'score': 556.04}, {'connected_gene': 'FAM201A', 'score': 550.77}, {'connected_gene': 'GC09M038752', 'score': 0.34}]
chr9	GH09I038622	38622024	38622053	0.62	[{'connected_gene': 'FAM201A', 'score': 550.77}, {'connected_gene': 'ANKRD18A', 'score': 550.77}, {'connected_gene': 'GC09M038752', 'score': 0.34}]
chr9	GH09I038642	38642064	38642213	0.66	[{'connected_gene': 'GC09M038752', 'score': 550.77}, {'connected_gene': 'YWHABP1', 'score': 550.77}, {'connected_gene': 'RNU6-765P', 'score': 12.08}, {'connected_gene': 'ANKRD18A', 'score': 11.58}]
chr9	GH09I038565	38565703	38566538	0.43	[{'connected_gene': 'PIR41410', 'score': 550.77}, {'connected_gene': 'PIR37621', 'score': 550.77}, {'connected_gene': 'PIR43356', 'score': 550.77}, {'connected_gene': 'ENSG00000272904', 'score': 0.77}, {'connected_gene': 'SNX18P3', 'score': 0.77}, {'connected_gene': 'FAM95C', 'score': 0.39}, {'connected_gene': 'PIR40601', 'score': 0.37}, {'connected_gene': 'ANKRD18A', 'score': 0.23}]
chr9	GH09I038545	38545921	38547253	0.38	[{'connected_gene': 'PIR62891', 'score': 550.77}, {'connected_gene': 'PIR47878', 'score': 550.77}, {'connected_gene': 'ENSG00000272904', 'score': 0.34}, {'connected_gene': 'FAM95C', 'score': 0.29}, {'connected_gene': 'ANKRD18A', 'score': 0.19}]