PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000608836	[[37311593, 37311713], [37315511, 37315583], [37316782, 37317009], [37317823, 37317865], [37319058, 37319179], [37319307, 37319398], [37321224, 37321338], [37322579, 37322661], [37323350, 37323738]]	[[37315536, 37315583], [37316782, 37317009], [37317823, 37317865], [37319058, 37319179], [37319307, 37319398], [37321224, 37321338], [37322579, 37322661], [37323350, 37323406]]
ENST00000409774	[[37311593, 37311713], [37315511, 37315583], [37316782, 37317009], [37317823, 37317865], [37319058, 37319179], [37319307, 37319398], [37321224, 37321338], [37322579, 37322661], [37323350, 37326387]]	[[37311660, 37311713], [37315511, 37315583], [37316782, 37317009], [37317823, 37317865], [37319058, 37319179], [37319307, 37319398], [37321224, 37321338], [37322579, 37322661], [37323350, 37323406]]
ENST00000281932	[[37311660, 37311713], [37315511, 37315583], [37319058, 37319179], [37319307, 37319398], [37321224, 37321338], [37322579, 37322661], [37323350, 37326387]]	[[37315576, 37315583], [37319058, 37319179], [37319307, 37319398], [37321224, 37321338], [37322579, 37322661], [37323350, 37323406]]
ENST00000473067	[[37315506, 37315583], [37319058, 37319179], [37319307, 37319398], [37321224, 37321467]]	None
NM_001278505	[[37311593, 37311713], [37315511, 37315583], [37319058, 37319179], [37319307, 37319398], [37321224, 37321338], [37322579, 37322661], [37323350, 37326387]]	[[37315576, 37315583], [37319058, 37319179], [37319307, 37319398], [37321224, 37321338], [37322579, 37322661], [37323350, 37323406]]
NM_001322249	[[37311593, 37311713], [37315511, 37315583], [37316782, 37317009], [37319058, 37319179], [37319307, 37319398], [37321224, 37321338], [37322579, 37322661], [37323350, 37326387]]	[[37311660, 37311713], [37315511, 37315583], [37316782, 37317009], [37319058, 37319179], [37319307, 37319398], [37321224, 37321338], [37322579, 37322661], [37323350, 37323406]]
NM_174931	[[37311593, 37311713], [37315511, 37315583], [37316782, 37317009], [37317823, 37317865], [37319058, 37319179], [37319307, 37319398], [37321224, 37321338], [37322579, 37322661], [37323350, 37326387]]	[[37311660, 37311713], [37315511, 37315583], [37316782, 37317009], [37317823, 37317865], [37319058, 37319179], [37319307, 37319398], [37321224, 37321338], [37322579, 37322661], [37323350, 37323406]]

Promoter

Chrom	Start	End	Description
chr2	37311588	37311602	CAGE_peak_2_at_CCDC75_5end
chr2	37311630	37311643	CAGE_peak_3_at_CCDC75_5end
chr2	37311645	37311692	CAGE_peak_1_at_CCDC75_5end
chr2	37319058	37319070	CAGE_peak_4_at_CCDC75_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I036961	36961576	36968848	2.29	[{'connected_gene': 'STRN', 'score': 562.56}, {'connected_gene': 'ENSG00000272054', 'score': 12.37}, {'connected_gene': 'GPATCH11', 'score': 5.52}, {'connected_gene': 'GC02P036908', 'score': 0.22}, {'connected_gene': 'HEATR5B', 'score': 0.13}]
chr2	GH02I037012	37012601	37013998	0.91	[{'connected_gene': 'STRN', 'score': 16.37}, {'connected_gene': 'GPATCH11', 'score': 5.13}, {'connected_gene': 'GC02M036982', 'score': 0.31}, {'connected_gene': 'HEATR5B', 'score': 0.19}]
chr2	GH02I037223	37223446	37225428	0.46	[{'connected_gene': 'NDUFAF7', 'score': 4.85}, {'connected_gene': 'GPATCH11', 'score': 4.47}, {'connected_gene': 'CEBPZ', 'score': 0.44}, {'connected_gene': 'ENSG00000272054', 'score': 0.37}]
chr2	GH02I037060	37060163	37061007	0.2	[{'connected_gene': 'HEATR5B', 'score': 17.42}, {'connected_gene': 'GPATCH11', 'score': 12.61}, {'connected_gene': 'STRN', 'score': 10.48}, {'connected_gene': 'GC02M036982', 'score': 0.18}]
chr2	GH02I037110	37110898	37111027	0.31	[{'connected_gene': 'HEATR5B', 'score': 12.98}, {'connected_gene': 'GPATCH11', 'score': 12.98}, {'connected_gene': 'ENSG00000224891', 'score': 0.28}, {'connected_gene': 'EIF2AK2', 'score': 0.25}]
chr2	GH02I037083	37083091	37085468	2.03	[{'connected_gene': 'HEATR5B', 'score': 565.13}, {'connected_gene': 'GPATCH11', 'score': 550.77}, {'connected_gene': 'ENSG00000272054', 'score': 20.54}, {'connected_gene': 'CEBPZ', 'score': 10.31}, {'connected_gene': 'GC02M036982', 'score': 0.15}]
chr2	GH02I037085	37085698	37086087	0.54	[{'connected_gene': 'HEATR5B', 'score': 555.76}, {'connected_gene': 'GPATCH11', 'score': 550.77}, {'connected_gene': 'ENSG00000224891', 'score': 0.21}]
chr2	GH02I036476	36476043	36481022	1.08	[{'connected_gene': 'CRIM1', 'score': 16.77}, {'connected_gene': 'GPATCH11', 'score': 4.34}, {'connected_gene': 'ENSG00000273090', 'score': 0.28}, {'connected_gene': 'GC02P036388', 'score': 0.16}]
chr2	GH02I037098	37098017	37099724	0.43	[{'connected_gene': 'GPATCH11', 'score': 11.7}, {'connected_gene': 'EIF2AK2', 'score': 10.72}, {'connected_gene': 'HEATR5B', 'score': 5.15}, {'connected_gene': 'CEBPZOS', 'score': 4.53}, {'connected_gene': 'ENSG00000224891', 'score': 0.25}]
chr2	GH02I037103	37103798	37103987	0.87	[{'connected_gene': 'GPATCH11', 'score': 0.37}, {'connected_gene': 'ENSG00000224891', 'score': 0.26}, {'connected_gene': 'EIF2AK2', 'score': 0.23}]
chr2	GH02I037062	37062845	37063799	0.2	[{'connected_gene': 'GPATCH11', 'score': 21.77}, {'connected_gene': 'HEATR5B', 'score': 11.9}, {'connected_gene': 'GC02M036982', 'score': 0.18}]
chr2	GH02I037079	37079369	37081960	0.83	[{'connected_gene': 'GPATCH11', 'score': 12.5}, {'connected_gene': 'CEBPZOS', 'score': 6.31}, {'connected_gene': 'HEATR5B', 'score': 5.99}, {'connected_gene': 'GC02M036982', 'score': 0.15}]
chr2	GH02I037375	37375877	37379187	1.64	[{'connected_gene': 'PRKD3', 'score': 11.02}, {'connected_gene': 'LOC101929542', 'score': 11.02}, {'connected_gene': 'RNU6-939P', 'score': 10.88}, {'connected_gene': 'CDC42EP3', 'score': 9.36}, {'connected_gene': 'RMDN2', 'score': 9.25}, {'connected_gene': 'CYP1B1', 'score': 9.16}, {'connected_gene': 'QPCT', 'score': 3.53}, {'connected_gene': 'GPATCH11', 'score': 1.4}, {'connected_gene': 'GC02P037427', 'score': 0.25}]
chr2	GH02I037125	37125151	37126044	0.2	[{'connected_gene': 'CEBPZ', 'score': 15.47}, {'connected_gene': 'NDUFAF7', 'score': 11.15}, {'connected_gene': 'HEATR5B', 'score': 5.04}, {'connected_gene': 'ENSG00000224891', 'score': 0.34}, {'connected_gene': 'EIF2AK2', 'score': 0.29}, {'connected_gene': 'GPATCH11', 'score': 0.26}]
chr2	GH02I037089	37089677	37092335	0.96	[{'connected_gene': 'CEBPZ', 'score': 15.01}, {'connected_gene': 'NDUFAF7', 'score': 10.59}, {'connected_gene': 'CEBPZOS', 'score': 6.88}, {'connected_gene': 'GPATCH11', 'score': 6.52}, {'connected_gene': 'STRN', 'score': 5.74}, {'connected_gene': 'HEATR5B', 'score': 5.42}, {'connected_gene': 'ENSG00000224891', 'score': 0.22}]
chr2	GH02I037118	37118672	37119588	0.56	[{'connected_gene': 'CEBPZOS', 'score': 5.89}, {'connected_gene': 'ENSG00000224891', 'score': 0.31}, {'connected_gene': 'GPATCH11', 'score': 0.29}, {'connected_gene': 'EIF2AK2', 'score': 0.28}]
chr2	GH02I037147	37147731	37147790	0.5	[{'connected_gene': 'ENSG00000224891', 'score': 550.77}, {'connected_gene': 'EIF2AK2', 'score': 550.44}, {'connected_gene': 'GPATCH11', 'score': 0.21}]