PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000383699	[[85008131, 85008819], [85775671, 85775698], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86114754, 86114880], [86115814, 86123579]]	[[85008758, 85008819], [85775671, 85775698], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86114754, 86114880], [86115814, 86115933]]
ENST00000407528	[[85008696, 85008819], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86028313, 86028433], [86114754, 86114880], [86115814, 86115985]]	[[85008758, 85008819], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86028313, 86028433], [86114754, 86114880], [86115814, 86115933]]
ENST00000405615	[[85775631, 85775698], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86028313, 86028433], [86114754, 86114880], [86115814, 86115933]]	[[85775631, 85775698], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86028313, 86028433], [86114754, 86114880], [86115814, 86115933]]
ENST00000473523	[[85008139, 85008643], [85008740, 85008787]]	None
ENST00000485126	[[85008155, 85008819], [85009247, 85009589]]	None
NM_001167674	[[85008132, 85008819], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86028313, 86028433], [86114754, 86114880], [86115814, 86123579]]	[[85008758, 85008819], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86028313, 86028433], [86114754, 86114880], [86115814, 86115933]]
NM_001167675	[[85008132, 85008819], [85775671, 85775698], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86114754, 86114880], [86115814, 86123579]]	[[85008758, 85008819], [85775671, 85775698], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86114754, 86114880], [86115814, 86115933]]
NM_001256503	[[85554208, 85554400], [85561006, 85561048], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86028313, 86028433], [86114754, 86114880], [86115814, 86123579]]	[[85932553, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86028313, 86028433], [86114754, 86114880], [86115814, 86115933]]
NM_001256505	[[85554208, 85554400], [85561006, 85561048], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86114754, 86114880], [86115814, 86123579]]	[[85932553, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86114754, 86114880], [86115814, 86115933]]
NM_001256502	[[85554208, 85554400], [85561006, 85561048], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86028313, 86028433], [86114754, 86114880], [86115814, 86123579]]	[[85932553, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86028313, 86028433], [86114754, 86114880], [86115814, 86115933]]
NM_001256504	[[85554208, 85554400], [85561006, 85561048], [85775671, 85775698], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86114754, 86114880], [86115814, 86123579]]	[[85932553, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86114754, 86114880], [86115814, 86115933]]
NM_153184	[[85775631, 85775698], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86028313, 86028433], [86114754, 86114880], [86115814, 86123579]]	[[85775631, 85775698], [85851196, 85851346], [85932440, 85932593], [85935339, 85935477], [85961522, 85961693], [85984916, 85985007], [86010618, 86010797], [86028313, 86028433], [86114754, 86114880], [86115814, 86115933]]

Promoter

Chrom	Start	End	Description
chr3	85007662	85007678	CAGE_peak_8_at_CADM2_5end
chr3	85008089	85008189	CAGE_peak_1_at_CADM2_5end
chr3	85008200	85008248	CAGE_peak_2_at_CADM2_5end
chr3	86119561	86119570	CAGE_peak_16_at_CADM2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I085109	85109490	85109785	0.22	[{'connected_gene': 'CADM2', 'score': 4.63}, {'connected_gene': 'GC03P085129', 'score': 0.34}, {'connected_gene': 'GC03P085089', 'score': 0.34}]
chr3	GH03I084958	84958075	84960281	1.76	[{'connected_gene': 'CADM2', 'score': 555.2}, {'connected_gene': 'GC03P085012', 'score': 0.23}]
chr3	GH03I084964	84964730	84965755	0.49	[{'connected_gene': 'CADM2', 'score': 5.02}, {'connected_gene': 'GC03P085012', 'score': 0.25}]
chr3	GH03I085881	85881689	85881843	0.22	[{'connected_gene': 'CADM2-AS1', 'score': 5.04}, {'connected_gene': 'GC03M085902', 'score': 0.34}, {'connected_gene': 'GC03P085851', 'score': 0.29}, {'connected_gene': 'CADM2', 'score': 0.03}]
chr3	GH03I085161	85161186	85162304	0.6	[{'connected_gene': 'GC03M085156', 'score': 0.37}, {'connected_gene': 'GC03P085129', 'score': 0.29}, {'connected_gene': 'CADM2', 'score': 0.08}]
chr3	GH03I085163	85163031	85163180	0.52	[{'connected_gene': 'GC03M085156', 'score': 0.39}, {'connected_gene': 'GC03P085129', 'score': 0.29}, {'connected_gene': 'CADM2', 'score': 0.08}]
chr3	GH03I085071	85071374	85071504	0.22	[{'connected_gene': 'GC03M085046', 'score': 550.77}, {'connected_gene': 'CADM2', 'score': 2.05}, {'connected_gene': 'GC03P085012', 'score': 0.22}]
chr3	GH03I085726	85726431	85726580	0.68	[{'connected_gene': 'GC03P085763', 'score': 0.28}, {'connected_gene': 'GC03M085644', 'score': 0.28}, {'connected_gene': 'GC03P085652', 'score': 0.19}, {'connected_gene': 'CADM2', 'score': 0.02}]