PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000295113	[[183698001, 183699692], [183702675, 183702739], [183703136, 183703341], [183707205, 183707271], [183723513, 183723561], [183730802, 183731890]]	[[183699575, 183699692], [183702675, 183702739], [183703136, 183703341], [183707205, 183707271], [183723513, 183723561], [183730802, 183731280]]
NM_001463	[[183698001, 183699692], [183702675, 183702739], [183703136, 183703341], [183707205, 183707271], [183723513, 183723561], [183730802, 183731498]]	[[183699575, 183699692], [183702675, 183702739], [183703136, 183703341], [183707205, 183707271], [183723513, 183723561], [183730802, 183731280]]

Promoter

Chrom	Start	End	Description
chr2	183730840	183730851	CAGE_peak_7_at_FRZB_5end
chr2	183731285	183731309	CAGE_peak_2_at_FRZB_5end
chr2	183731311	183731323	CAGE_peak_5_at_FRZB_5end
chr2	183731332	183731352	CAGE_peak_4_at_FRZB_5end
chr2	183731355	183731384	CAGE_peak_3_at_FRZB_5end
chr2	183731495	183731507	CAGE_peak_6_at_FRZB_5end
chr2	183731882	183731896	CAGE_peak_1_at_FRZB_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I182714	182714696	182718639	2.07	[{'connected_gene': 'DNAJC10', 'score': 550.77}, {'connected_gene': 'NCKAP1', 'score': 13.08}, {'connected_gene': 'NUP35', 'score': 10.54}, {'connected_gene': 'PDE1A', 'score': 10.03}, {'connected_gene': 'FRZB', 'score': 7.0}, {'connected_gene': 'GC02P182762', 'score': 0.25}]
chr2	GH02I182866	182866020	182868679	1.74	[{'connected_gene': 'FRZB', 'score': 571.9}, {'connected_gene': 'DUSP19', 'score': 5.16}, {'connected_gene': 'GC02P182874', 'score': 0.44}]
chr2	GH02I182906	182906913	182907958	0.68	[{'connected_gene': 'FRZB', 'score': 17.92}, {'connected_gene': 'NCKAP1', 'score': 4.71}, {'connected_gene': 'GC02M182883', 'score': 0.77}, {'connected_gene': 'RNU6-1122P', 'score': 0.29}]
chr2	GH02I182914	182914555	182916694	0.83	[{'connected_gene': 'FRZB', 'score': 10.95}, {'connected_gene': 'NCKAP1', 'score': 4.68}, {'connected_gene': 'GC02M182883', 'score': 0.77}, {'connected_gene': 'GC02M183023', 'score': 0.14}, {'connected_gene': 'ENSG00000202141', 'score': 0.14}]
chr2	GH02I182948	182948862	182950453	0.9	[{'connected_gene': 'FRZB', 'score': 7.02}, {'connected_gene': 'GC02M182883', 'score': 0.28}, {'connected_gene': 'GC02M183023', 'score': 0.19}, {'connected_gene': 'ENSG00000202141', 'score': 0.19}, {'connected_gene': 'NCKAP1', 'score': 0.17}]
chr2	GH02I183010	183010104	183010962	1.12	[{'connected_gene': 'FRZB', 'score': 8.86}, {'connected_gene': 'GC02M183023', 'score': 0.39}, {'connected_gene': 'ENSG00000202141', 'score': 0.39}, {'connected_gene': 'NCKAP1', 'score': 0.31}, {'connected_gene': 'GC02M182883', 'score': 0.15}]
chr2	GH02I183056	183056503	183059010	0.62	[{'connected_gene': 'FRZB', 'score': 10.29}, {'connected_gene': 'NCKAP1', 'score': 4.73}, {'connected_gene': 'GC02P183062', 'score': 0.77}]
chr2	GH02I183019	183019540	183020482	0.2	[{'connected_gene': 'FRZB', 'score': 10.11}, {'connected_gene': 'GC02M183023', 'score': 0.77}, {'connected_gene': 'ENSG00000202141', 'score': 0.77}, {'connected_gene': 'NCKAP1', 'score': 0.37}, {'connected_gene': 'GC02M182883', 'score': 0.14}]
chr2	GH02I183048	183048135	183050969	0.43	[{'connected_gene': 'FRZB', 'score': 7.92}, {'connected_gene': 'NCKAP1', 'score': 5.15}, {'connected_gene': 'GC02P183062', 'score': 0.39}]
chr2	GH02I182889	182889920	182892305	0.8	[{'connected_gene': 'FRZB', 'score': 31.6}, {'connected_gene': 'RNU6-1122P', 'score': 0.37}, {'connected_gene': 'GC02M182883', 'score': 0.34}]
chr2	GH02I182672	182672322	182673532	0.57	[{'connected_gene': 'FRZB', 'score': 4.89}, {'connected_gene': 'PIR54634', 'score': 0.37}, {'connected_gene': 'LOC101929976', 'score': 0.26}]
chr2	GH02I182824	182824534	182824683	0.38	[{'connected_gene': 'FRZB', 'score': 10.25}, {'connected_gene': 'ENSG00000212404', 'score': 0.77}, {'connected_gene': 'GC02P182790', 'score': 0.28}]
chr2	GH02I182818	182818207	182820277	0.66	[{'connected_gene': 'FRZB', 'score': 10.74}, {'connected_gene': 'ENSG00000212404', 'score': 0.44}, {'connected_gene': 'GC02P182790', 'score': 0.31}]
chr2	GH02I183078	183078001	183080049	2.03	[{'connected_gene': 'DUSP19', 'score': 558.04}, {'connected_gene': 'NCKAP1', 'score': 11.35}, {'connected_gene': 'NUP35', 'score': 11.3}, {'connected_gene': 'ENSG00000224643', 'score': 10.83}, {'connected_gene': 'FRZB', 'score': 6.0}]
chr2	GH02I183034	183034790	183039545	2.04	[{'connected_gene': 'NCKAP1', 'score': 555.34}, {'connected_gene': 'NUP35', 'score': 26.3}, {'connected_gene': 'DNAJC10', 'score': 10.58}, {'connected_gene': 'FRZB', 'score': 9.64}, {'connected_gene': 'GC02M183023', 'score': 0.39}, {'connected_gene': 'ENSG00000202141', 'score': 0.39}]
chr2	GH02I182713	182713401	182714097	0.54	[{'connected_gene': 'LOC101929976', 'score': 550.77}, {'connected_gene': 'FRZB', 'score': 8.2}, {'connected_gene': 'PIR54634', 'score': 0.22}]
chr2	GH02I183059	183059371	183061412	0.98	[{'connected_gene': 'GC02P183062', 'score': 550.77}, {'connected_gene': 'FRZB', 'score': 8.07}, {'connected_gene': 'NCKAP1', 'score': 4.92}]