PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000272238	[[10861774, 10861857], [10862949, 10863104], [10866627, 10866695], [10894106, 10894192], [10904456, 10904551], [10908844, 10908936], [10911964, 10912063], [10912667, 10912736], [10914913, 10915006], [10915103, 10915197], [10917710, 10917848], [10918697, 10918795], [10922368, 10922501], [10923299, 10923561]]	[[10862975, 10863104], [10866627, 10866695], [10894106, 10894192], [10904456, 10904551], [10908844, 10908936], [10911964, 10912063], [10912667, 10912736], [10914913, 10915006], [10915103, 10915197], [10917710, 10917848], [10918697, 10918795], [10922368, 10922501], [10923299, 10923389]]
ENST00000381661	[[10861774, 10861857], [10862949, 10863104], [10866627, 10866695], [10894106, 10894192], [10904456, 10904551], [10908844, 10908936], [10911964, 10912063], [10912667, 10912736], [10914913, 10915006], [10915103, 10915197], [10918697, 10918795], [10922368, 10922501], [10923299, 10925236]]	[[10862975, 10863104], [10866627, 10866695], [10894106, 10894192], [10904456, 10904551], [10908844, 10908936], [10911964, 10912063], [10912667, 10912736], [10914913, 10915006], [10915103, 10915197], [10918697, 10918795], [10922368, 10922501], [10923299, 10923389]]
ENST00000480289	[[10918613, 10918795], [10922368, 10922501], [10923299, 10923369]]	None
NM_144583	[[10861774, 10861857], [10862949, 10863104], [10866627, 10866695], [10894106, 10894192], [10904456, 10904551], [10908844, 10908936], [10911964, 10912063], [10912667, 10912736], [10914913, 10915006], [10915103, 10915197], [10918697, 10918795], [10922368, 10922501], [10923299, 10925236]]	[[10862975, 10863104], [10866627, 10866695], [10894106, 10894192], [10904456, 10904551], [10908844, 10908936], [10911964, 10912063], [10912667, 10912736], [10914913, 10915006], [10915103, 10915197], [10918697, 10918795], [10922368, 10922501], [10923299, 10923389]]
NM_001039362	[[10861774, 10861857], [10862949, 10863104], [10866627, 10866695], [10894106, 10894192], [10904456, 10904551], [10908844, 10908936], [10911964, 10912063], [10912667, 10912736], [10914913, 10915006], [10915103, 10915197], [10917710, 10917848], [10918697, 10918795], [10922368, 10922501], [10923299, 10925236]]	[[10862975, 10863104], [10866627, 10866695], [10894106, 10894192], [10904456, 10904551], [10908844, 10908936], [10911964, 10912063], [10912667, 10912736], [10914913, 10915006], [10915103, 10915197], [10917710, 10917848], [10918697, 10918795], [10922368, 10922501], [10923299, 10923389]]

Promoter

Chrom	Start	End	Description
chr2	10861749	10861762	CAGE_peak_1_at_ATP6V1C2_5end
chr2	10861777	10861786	CAGE_peak_2_at_ATP6V1C2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I010721	10721581	10721640	0.82	[{'connected_gene': 'ATP6V1C2', 'score': 550.77}, {'connected_gene': 'RNU7-138P', 'score': 0.34}]
chr2	GH02I010759	10757395	10757544	0.64	[{'connected_gene': 'ATP6V1C2', 'score': 8.28}, {'connected_gene': 'GC02P010745', 'score': 0.39}, {'connected_gene': 'LOC105373428', 'score': 0.37}]
chr2	GH02I010737	10737554	10738995	0.62	[{'connected_gene': 'RNU7-138P', 'score': 0.44}, {'connected_gene': 'ATP6V1C2', 'score': 0.37}]
chr2	GH02I010761	10761750	10762054	0.31	[{'connected_gene': 'LOC105373428', 'score': 5.51}, {'connected_gene': 'GC02P010745', 'score': 0.37}, {'connected_gene': 'ATP6V1C2', 'score': 0.26}]
chr2	GH02I010758	10758942	10759388	0.31	[{'connected_gene': 'LOC105373428', 'score': 6.57}, {'connected_gene': 'GC02P010745', 'score': 0.39}, {'connected_gene': 'ATP6V1C2', 'score': 0.28}]
chr2	GH02I010757	10757569	10758563	0.75	[{'connected_gene': 'LOC105373428', 'score': 6.08}, {'connected_gene': 'GC02P010745', 'score': 0.39}, {'connected_gene': 'ATP6V1C2', 'score': 0.28}]
chr2	GH02I010790	10790202	10791472	0.31	[{'connected_gene': 'LOC105373428', 'score': 15.67}, {'connected_gene': 'RNU7-176P', 'score': 11.72}, {'connected_gene': 'PDIA6', 'score': 11.63}, {'connected_gene': 'ATP6V1C2', 'score': 9.68}]
chr2	GH02I010764	10764772	10765992	0.31	[{'connected_gene': 'LOC105373428', 'score': 11.96}, {'connected_gene': 'RNU7-138P', 'score': 11.85}, {'connected_gene': 'GC02P010745', 'score': 0.34}, {'connected_gene': 'ATP6V1C2', 'score': 0.26}]
chr2	GH02I010772	10772748	10776268	0.79	[{'connected_gene': 'LOC105373428', 'score': 565.24}, {'connected_gene': 'PDIA6', 'score': 17.6}, {'connected_gene': 'RNU7-176P', 'score': 11.33}, {'connected_gene': 'ATP6V1C2', 'score': 10.14}]
chr2	GH02I010809	10809813	10813600	2.01	[{'connected_gene': 'PDIA6', 'score': 556.64}, {'connected_gene': 'NOL10', 'score': 11.46}, {'connected_gene': 'ATP6V1C2', 'score': 11.4}, {'connected_gene': 'LOC101929882', 'score': 10.61}, {'connected_gene': 'LOC105373428', 'score': 6.08}, {'connected_gene': 'RNU7-176P', 'score': 0.77}]
chr2	GH02I010745	10745151	10746310	0.97	[{'connected_gene': 'GC02P010745', 'score': 550.77}, {'connected_gene': 'RNU7-138P', 'score': 550.77}, {'connected_gene': 'ATP6V1C2', 'score': 7.5}, {'connected_gene': 'LOC105373428', 'score': 0.31}]
chr2	GH02I010717	10717294	10718421	0.52	[{'connected_gene': 'ENSG00000236162', 'score': 550.77}, {'connected_gene': 'RN7SL832P', 'score': 7.78}, {'connected_gene': 'ATP6V1C2', 'score': 0.77}]
chr2	GH02I010753	10753235	10753431	0.31	[{'connected_gene': 'GC02P010745', 'score': 0.44}, {'connected_gene': 'LOC105373428', 'score': 0.37}, {'connected_gene': 'ATP6V1C2', 'score': 0.29}]
chr2	GH02I010752	10752435	10752584	0.52	[{'connected_gene': 'GC02P010745', 'score': 0.44}, {'connected_gene': 'LOC105373428', 'score': 0.34}, {'connected_gene': 'ATP6V1C2', 'score': 0.29}]