PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000352536	[[117586720, 117587007], [117589344, 117589654], [117593616, 117594728]]	[[117586926, 117587007], [117589344, 117589654], [117593616, 117593657]]
ENST00000326274	[[117586736, 117587007], [117589344, 117589654], [117591705, 117592227], [117593616, 117594725]]	[[117586926, 117587007], [117589344, 117589654], [117591705, 117592227], [117593616, 117593657]]
NM_153453	[[117586720, 117587007], [117589344, 117589654], [117593616, 117594728]]	[[117586926, 117587007], [117589344, 117589654], [117593616, 117593657]]
NM_182645	[[117586720, 117587007], [117589344, 117589654], [117591705, 117592227], [117593616, 117594728]]	[[117586926, 117587007], [117589344, 117589654], [117591705, 117592227], [117593616, 117593657]]

Promoter

Chrom	Start	End	Description
chr6	117586713	117586727	CAGE_peak_1_at_VGLL2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I117165	117165681	117170537	1.07	[{'connected_gene': 'VGLL2', 'score': 7.85}, {'connected_gene': 'NEPNP', 'score': 4.63}, {'connected_gene': 'GC06M117235', 'score': 0.2}, {'connected_gene': 'RNA5SP214', 'score': 0.14}]
chr6	GH06I117264	117264518	117271136	1.96	[{'connected_gene': 'VGLL2', 'score': 563.91}, {'connected_gene': 'KPNA5', 'score': 4.82}, {'connected_gene': 'LOC105377964', 'score': 0.77}, {'connected_gene': 'RN7SKP18', 'score': 0.29}]
chr6	GH06I117287	117287443	117292134	0.56	[{'connected_gene': 'VGLL2', 'score': 11.79}, {'connected_gene': 'RN7SKP18', 'score': 0.44}, {'connected_gene': 'ROS1', 'score': 0.12}]
chr6	GH06I117272	117271906	117273580	0.97	[{'connected_gene': 'VGLL2', 'score': 13.39}, {'connected_gene': 'RN7SKP18', 'score': 0.31}]
chr6	GH06I117271	117271411	117271481	0.58	[{'connected_gene': 'VGLL2', 'score': 0.44}, {'connected_gene': 'RN7SKP18', 'score': 0.31}]
chr6	GH06I117155	117155895	117158483	0.31	[{'connected_gene': 'VGLL2', 'score': 7.78}, {'connected_gene': 'ENSG00000237021', 'score': 4.48}, {'connected_gene': 'GC06M117235', 'score': 0.18}, {'connected_gene': 'RNA5SP214', 'score': 0.15}]
chr6	GH06I117231	117231269	117233817	0.31	[{'connected_gene': 'VGLL2', 'score': 16.36}, {'connected_gene': 'GC06M117235', 'score': 0.77}, {'connected_gene': 'RNA5SP214', 'score': 0.09}]
chr6	GH06I117298	117298537	117299814	0.2	[{'connected_gene': 'RN7SKP18', 'score': 550.77}, {'connected_gene': 'VGLL2', 'score': 11.18}, {'connected_gene': 'ROS1', 'score': 0.13}]
chr6	GH06I117283	117283751	117284971	0.2	[{'connected_gene': 'RN7SKP18', 'score': 0.37}, {'connected_gene': 'VGLL2', 'score': 0.37}]
chr6	GH06I117300	117300118	117301317	0.43	[{'connected_gene': 'RN7SKP18', 'score': 550.77}, {'connected_gene': 'RN7SKP51', 'score': 550.77}, {'connected_gene': 'GOPC', 'score': 16.85}, {'connected_gene': 'KPNA5', 'score': 12.96}, {'connected_gene': 'VGLL2', 'score': 11.16}, {'connected_gene': 'DCBLD1', 'score': 4.65}, {'connected_gene': 'ROS1', 'score': 0.13}]
chr6	GH06I117302	117302008	117304752	0.2	[{'connected_gene': 'RN7SKP51', 'score': 550.77}, {'connected_gene': 'VGLL2', 'score': 11.16}, {'connected_gene': 'PIR51228', 'score': 0.34}, {'connected_gene': 'ROS1', 'score': 0.13}]