PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000378053	[[14303633, 14308204], [14318049, 14318254]]	[[14306202, 14308152]]
ENST00000341420	[[14304640, 14308204], [14309779, 14309973], [14318049, 14318262]]	[[14306202, 14308152]]
ENST00000462077	[[14309567, 14309973], [14318049, 14318260]]	None
NM_198391	[[14304638, 14308204], [14309779, 14309973], [14318049, 14318313]]	[[14306202, 14308152]]
NM_013281	[[14304638, 14308204], [14318049, 14318313]]	[[14306202, 14308152]]

Promoter

Chrom	Start	End	Description
chr20	14318211	14318232	CAGE_peak_1_at_FLRT3_5end
chr20	14318248	14318264	CAGE_peak_2_at_FLRT3_5end
chr20	14318270	14318289	CAGE_peak_3_at_FLRT3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr20	GH20I014332	14332684	14338284	2.14	[{'connected_gene': 'FLRT3', 'score': 550.77}, {'connected_gene': 'GAPDHP2', 'score': 11.93}, {'connected_gene': 'TASP1', 'score': 11.0}, {'connected_gene': 'GC20M014272', 'score': 0.25}, {'connected_gene': 'RN7SL864P', 'score': 0.14}, {'connected_gene': 'MACROD2', 'score': 0.05}]
chr20	GH20I014280	14280211	14281066	0.38	[{'connected_gene': 'FLRT3', 'score': 0.22}, {'connected_gene': 'RN7SL864P', 'score': 0.22}, {'connected_gene': 'GC20M014272', 'score': 0.15}, {'connected_gene': 'MACROD2', 'score': 0.06}]
chr20	GH20I014325	14325202	14325460	0.6	[{'connected_gene': 'FLRT3', 'score': 0.39}, {'connected_gene': 'GC20M014272', 'score': 0.22}, {'connected_gene': 'RN7SL864P', 'score': 0.15}, {'connected_gene': 'MACROD2', 'score': 0.05}]
chr20	GH20I014277	14277357	14279023	0.2	[{'connected_gene': 'FLRT3', 'score': 0.22}, {'connected_gene': 'RN7SL864P', 'score': 0.22}, {'connected_gene': 'GC20M014272', 'score': 0.14}, {'connected_gene': 'MACROD2', 'score': 0.06}]
chr20	GH20I015162	15162201	15163081	0.79	[{'connected_gene': 'FLRT3', 'score': 4.94}, {'connected_gene': 'GC20P015153', 'score': 0.44}, {'connected_gene': 'RNA5SP475', 'score': 0.13}]
chr20	GH20I014285	14285977	14286261	0.44	[{'connected_gene': 'MACROD2', 'score': 1.48}, {'connected_gene': 'FLRT3', 'score': 0.23}, {'connected_gene': 'RN7SL864P', 'score': 0.21}, {'connected_gene': 'GC20M014272', 'score': 0.15}]
chr20	GH20I014341	14341254	14345211	0.6	[{'connected_gene': 'RNU6-228P', 'score': 0.44}, {'connected_gene': 'FLRT3', 'score': 0.44}, {'connected_gene': 'GC20M014272', 'score': 0.26}, {'connected_gene': 'MACROD2', 'score': 0.05}]
chr20	GH20I014287	14287083	14290938	0.63	[{'connected_gene': 'RNU6-228P', 'score': 10.79}, {'connected_gene': 'FLRT3', 'score': 4.38}, {'connected_gene': 'RN7SL864P', 'score': 0.2}, {'connected_gene': 'GC20M014272', 'score': 0.15}, {'connected_gene': 'MACROD2', 'score': 0.06}]
chr20	GH20I014226	14226202	14226799	0.49	[{'connected_gene': 'RN7SL864P', 'score': 0.77}, {'connected_gene': 'FLRT3', 'score': 0.14}, {'connected_gene': 'MACROD2', 'score': 0.07}]
chr20	GH20I014232	14232735	14232884	0.38	[{'connected_gene': 'RN7SL864P', 'score': 0.44}, {'connected_gene': 'FLRT3', 'score': 0.15}, {'connected_gene': 'MACROD2', 'score': 0.07}]
chr20	GH20I014235	14235435	14235584	0.49	[{'connected_gene': 'RN7SL864P', 'score': 0.39}, {'connected_gene': 'FLRT3', 'score': 0.15}, {'connected_gene': 'MACROD2', 'score': 0.07}]