PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000284818	[[74903586, 74903789], [74917030, 74917120], [74922235, 74922364], [74939023, 74939076], [74941190, 74941322]]	[[74903677, 74903789], [74917030, 74917120], [74922235, 74922364], [74939023, 74939076], [74941190, 74941289]]
ENST00000518893	[[74903660, 74903789], [74922235, 74922364], [74939023, 74939076], [74941190, 74941309]]	[[74903677, 74903789], [74922235, 74922364], [74939023, 74939076], [74941190, 74941289]]
NM_001195797	[[74903563, 74903789], [74922235, 74922364], [74939023, 74939076], [74941190, 74941314]]	[[74903677, 74903789], [74922235, 74922364], [74939023, 74939076], [74941190, 74941289]]
NM_015364	[[74903563, 74903789], [74917030, 74917120], [74922235, 74922364], [74939023, 74939076], [74941190, 74941314]]	[[74903677, 74903789], [74917030, 74917120], [74922235, 74922364], [74939023, 74939076], [74941190, 74941289]]

Promoter

Chrom	Start	End	Description
chr8	74903580	74903661	CAGE_peak_1_at_LY96_5end
chr8	74903677	74903688	CAGE_peak_3_at_LY96_5end
chr8	74903696	74903725	CAGE_peak_2_at_LY96_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I073994	73994801	73995840	0.2	[{'connected_gene': 'TMEM70', 'score': 24.45}, {'connected_gene': 'ELOC', 'score': 11.94}, {'connected_gene': 'LY96', 'score': 0.77}, {'connected_gene': 'GC08M074003', 'score': 0.29}]
chr8	GH08I074032	74032816	74033717	0.2	[{'connected_gene': 'TMEM70', 'score': 16.55}, {'connected_gene': 'LY96', 'score': 11.03}, {'connected_gene': 'ELOC', 'score': 10.49}, {'connected_gene': 'GC08M074003', 'score': 0.77}, {'connected_gene': 'RNU6-1300P', 'score': 0.37}]
chr8	GH08I074008	74008353	74009615	0.38	[{'connected_gene': 'TMEM70', 'score': 7.35}, {'connected_gene': 'LY96', 'score': 0.37}, {'connected_gene': 'GC08M074003', 'score': 0.34}]
chr8	GH08I074014	74014378	74014506	0.27	[{'connected_gene': 'LY96', 'score': 3.89}, {'connected_gene': 'UBE2W', 'score': 2.96}, {'connected_gene': 'TMEM70', 'score': 2.28}, {'connected_gene': 'GC08M074003', 'score': 0.39}]
chr8	GH08I074033	74032546	74032695	0.2	[{'connected_gene': 'LY96', 'score': 11.03}, {'connected_gene': 'TMEM70', 'score': 10.49}, {'connected_gene': 'ELOC', 'score': 10.49}, {'connected_gene': 'GDAP1', 'score': 4.61}, {'connected_gene': 'GC08M074003', 'score': 0.77}, {'connected_gene': 'RNU6-1300P', 'score': 0.37}]
chr8	GH08I073990	73990591	73992966	1.83	[{'connected_gene': 'LY96', 'score': 550.77}, {'connected_gene': 'TMEM70', 'score': 21.21}, {'connected_gene': 'GC08M074003', 'score': 0.28}]
chr8	GH08I073984	73984765	73985777	0.52	[{'connected_gene': 'DSTNP3', 'score': 550.77}, {'connected_gene': 'TMEM70', 'score': 7.8}, {'connected_gene': 'LY96', 'score': 0.44}]
chr8	GH08I073966	73966801	73967000	0.31	[{'connected_gene': 'GC08P073966', 'score': 550.77}, {'connected_gene': 'LY96', 'score': 10.6}, {'connected_gene': 'UBE2W', 'score': 10.5}, {'connected_gene': 'GC08M073941', 'score': 0.44}, {'connected_gene': 'ELOC', 'score': 0.44}]
chr8	GH08I073967	73966406	73966555	0.57	[{'connected_gene': 'GC08P073966', 'score': 550.77}, {'connected_gene': 'LY96', 'score': 10.6}, {'connected_gene': 'UBE2W', 'score': 10.5}, {'connected_gene': 'TMEM70', 'score': 6.19}, {'connected_gene': 'GC08M073941', 'score': 0.44}, {'connected_gene': 'ELOC', 'score': 0.44}]