PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
MORF4L1	1	MORF4L2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Sy SM (2009), Huttlin EL (2015), Huttlin EL (2017)	3
BRMS1	1	SAP30	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Meehan WJ (2004), Meehan WJ (2004), Hein MY (2015)	3
SIN3A	13	SAP30	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, pull down, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1999), Yochum GS (2001), Kuzmichev A (2002), Kuzmichev A (2002), Kuzmichev A (2002), Laherty CD (1998), Viiri KM (2006), Viiri KM (2006), Nakamura T (2002), Lai A (2001), Skowyra D (2001), Zhang Y (1998), Zhang Y (1998), Xie T (2011), Xie T (2011), Bantscheff M (2011), Hein MY (2015)	21
TFAP4	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Ku WC (2009), Ku WC (2009)	2
MORF4L1	1	SIN3A	13	affinity chromatography technology	Doyon Y (2004)	1
GATAD1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Varier RA (2016)	3
MORF4L2	0	KDM5A	6	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2007)	2
SIN3B	5	SIN3A	13	affinity chromatography technology	Hein MY (2015)	1
FOXK2	9	REST	3	affinity chromatography technology, affinity chromatography technology, biochemical	Shan L (2016), Shan L (2016), Shan L (2016)	3
SMARCA2	17	SIN3A	13	biochemical, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Sif S (2001), Sif S (2001), Pal S (2003), Pal S (2003), Nakamura T (2002), Nakamura T (2002), Kemper JK (2004), Kemper JK (2004), Wan C (2015)	9
HIST3H3	0	GATAD1	0	unspecified method	Vermeulen M (2010)	1
HDAC1	4	GATAD1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Vermeulen M (2010), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	5
TP53	0	AKAP12	4	affinity chromatography technology	Fogeron ML (2013)	1
HDAC9	7	SMARCA4	19	affinity chromatography technology	Hang CT (2010)	1
ING2	0	SMARCB1	1	affinity chromatography technology	Doyon Y (2006)	1
HDAC2	1	ESR1	0	affinity chromatography technology, affinity chromatography technology	Itoh Y (2007), Tarallo R (2011)	2
HCFC1	4	SIN3B	5	affinity chromatography technology	Wysocka J (2003)	1
MORF4L2	0	PHF12	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	5
TFAP4	3	SIN3A	13	affinity chromatography technology	Huttlin EL (2017)	1
SIN3B	5	ARID4A	3	affinity chromatography technology, affinity chromatography technology	Lai A (2001), Lai A (2001)	2
RBBP4	3	SIN3B	5	affinity chromatography technology	Hauri S (2016)	1
TP53	0	SMARCB1	1	pull down, affinity chromatography technology, pull down, biochemical	Lee D (2002), Lee D (2002), Lee D (2002), Lee D (2002)	4
SOX2	4	RBBP7	1	affinity chromatography technology	Engelen E (2011)	1
SAP130	2	SUDS3	3	affinity chromatography technology	Fleischer TC (2003)	1
AURKA	1	SIN3B	5	pull down	Kamran M (2017)	1
HDAC1	4	ESR1	0	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, imaging technique	Kawai H (2003), Kawai H (2003), Varshochi R (2005), Varshochi R (2005), Kurtev V (2004), Liu XF (2004), Itoh Y (2007), Tarallo R (2011), Yoshimaru T (2013)	9
SMN1	0	SETDB1	3	two hybrid	Vinayagam A (2011)	1
SMARCA4	19	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, genetic interference	Sif S (2001), Qiu Z (2008), Xu Z (2006), Pal S (2003), Battaglioli E (2002), Tando T (2010), Hang CT (2010), Shen JP (2017)	8
SINHCAF	0	HDAC2	1	affinity chromatography technology	Huttlin EL (2017)	1
AURKA	1	MYT1	2	pull down	Kamran M (2017)	1
IKZF4	1	HDAC2	1	affinity chromatography technology	Koipally J (2002)	1
CIITA	4	SIN3B	5	affinity chromatography technology	Xu Y (2008)	1
ING2	0	COPS2	5	affinity chromatography technology, pull down	Fegers I (2007), Fegers I (2007)	2
EMSY	3	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Varier RA (2016), Varier RA (2016), Varier RA (2016)	3
HDAC2	1	EMSY	3	affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Varier RA (2016)	2
AR	3	HDAC1	4	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gaughan L (2002), Gaughan L (2002), Gaughan L (2005), Gaughan L (2005), Gobinet J (2005), Peche LY (2015)	6
RBBP7	1	SUDS3	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RBBP4	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (2003), Hakimi MA (2003), Zhang Y (2002), Tong JK (1998), Sun JM (2007), Sun JM (2007), Adenuga D (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Wan C (2015), Hauri S (2016)	14
HDAC1	4	SIN3B	5	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1999), Koipally J (1999), Romm E (2005), Humphrey GW (2001), Terhune SS (2010), Joshi P (2013), Wan C (2015), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	10
CIITA	4	HDAC2	1	affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology	Kong X (2009), Kong X (2009), Zika E (2003), Xu Y (2008)	4
SAP25	1	SIN3A	13	pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Shiio Y (2006), Shiio Y (2006), Shiio Y (2006), Shiio Y (2006), Shiio Y (2006)	5
GATAD1	0	TNRC18	8	affinity chromatography technology	Varier RA (2016)	1
GATAD1	0	SIN3B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Hein MY (2015), Varier RA (2016)	4
COPS2	5	SIN3B	5	pull down	Moehren U (2004)	1
IKZF1	2	FOXK2	9	affinity chromatography technology	Huttlin EL (2017)	1
ESR1	0	PBX1	9	imaging technique	Toska E (2017)	1
GATAD1	0	EMSY	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Varier RA (2016), Varier RA (2016), Varier RA (2016), Varier RA (2016)	6
MRGBP	0	RBBP7	1	affinity chromatography technology	Hayakawa T (2007)	1
SAP30	1	SAP130	2	affinity chromatography technology	Hein MY (2015)	1
IKZF2	3	IKZF3	1	affinity chromatography technology	Kelley CM (1998)	1
SOX2	4	SIN3B	5	affinity chromatography technology	Cox JL (2013)	1
SINHCAF	0	TNRC18	8	affinity chromatography technology	Huttlin EL (2017)	1
HDAC2	1	SETDB1	3	affinity chromatography technology	Yang L (2003)	1
SOX2	4	SMARCB1	1	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Cox JL (2013)	2
ING2	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Huttlin EL (2015), Huttlin EL (2017)	4
USP37	1	SIN3B	5	bioid	Yeh C (2015)	1
AR	3	SMARCB1	1	bioid	Lempiaeinen JK (2017)	1
NSD2	9	HIST3H3	0	pull down, unspecified method	He C (2013), Vermeulen M (2010)	2
FOXK2	9	RBBP4	3	pull down	Shan L (2016)	1
SMARCA2	17	HDAC1	4	biochemical, affinity chromatography technology, affinity chromatography technology	Sif S (2001), Nakamura T (2002), Hein MY (2015)	3
PHF23	3	SIN3A	13	affinity chromatography technology	Huttlin EL (2017)	1
RBBP7	1	PHF12	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	4
SOX2	4	HDAC2	1	affinity chromatography technology	Engelen E (2011)	1
HDAC1	4	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (2003), Yao YL (2003), Yao YL (2003), Fleischer TC (2003), Fleischer TC (2003), Yang L (2003), Grozinger CM (1999), Zhang J (2002), Zhang J (2002), You A (2001), Zhang Y (1999), Zhang Y (2002), Tong JK (1998), Hassig CA (1998), Yasui D (2002), Huang EY (2000), Huang EY (2000), Kuzmichev A (2002), Kuzmichev A (2002), Martinowich K (2003), Martinowich K (2003), Suzuki M (2003), Suzuki M (2006), Nakamura T (2002), Wei Q (2005), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Skowyra D (2001), Humphrey GW (2001), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Sun JM (2007), Karwowska-Desaulniers P (2007), Terhune SS (2010), Xue Y (1998), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Oh YM (2009), Wan C (2015), Hein MY (2015), Hsu DS (2014), Huttlin EL (2017)	45
AURKA	1	REST	3	pull down	Kamran M (2017)	1
HDAC2	1	CBFA2T3	3	affinity chromatography technology	Amann JM (2001)	1
HDAC9	7	TP53	0	affinity chromatography technology	Yuan Z (2010)	1
SAP25	1	SAP30	1	affinity chromatography technology	Shiio Y (2006)	1
ACTN4	4	ESR1	0	affinity chromatography technology, pull down	Khurana S (2011), Khurana S (2011)	2
MORF4L2	0	HDAC9	7	affinity chromatography technology	Tominaga K (2003)	1
PHF12	6	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Varier RA (2016)	2
TP53	0	SIN3B	5	affinity chromatography technology, two hybrid	Bansal N (2011), Bansal N (2011)	2
TP53	0	SMN1	0	affinity chromatography technology, pull down, two hybrid	Young PJ (2002), Young PJ (2002), Vinayagam A (2011)	3
MORF4L2	0	SIN3B	5	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010)	2
FOXK2	9	SIN3B	5	affinity chromatography technology	Li X (2015)	1
AURKA	1	HDAC2	1	pull down	Pugacheva EN (2007)	1
HCFC1	4	RBBP4	3	affinity chromatography technology	Wysocka J (2003)	1
ESR1	0	RBBP7	1	pull down, affinity chromatography technology	Creekmore AL (2008), Tarallo R (2011)	2
SIN3B	5	SAP130	2	affinity chromatography technology	Hein MY (2015)	1
SINHCAF	0	FOXK2	9	affinity chromatography technology	Huttlin EL (2017)	1
HDAC1	4	SINHCAF	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
HDAC1	4	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, imaging technique, affinity chromatography technology	Hakimi MA (2002), Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Fischle W (2002), Johnson CA (2002), Fischle W (2001), Fischer DD (2002), Fischer DD (2002), Ashburner BP (2001), Zhang Y (1999), Tong JK (1998), Tong JK (1998), Hassig CA (1998), Hassig CA (1998), Zhang Y (1997), van der Vlag J (1999), van der Vlag J (1999), Noh EJ (2009), Noh EJ (2009), Galasinski SC (2002), Galasinski SC (2002), Galasinski SC (2002), He S (2005), Humphrey GW (2001), Park JH (2004), Park JH (2004), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Adenuga D (2010), Xue Y (1998), Xue Y (1998), Martinez FP (2012), Martinez FP (2012), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Joshi P (2013), Schnur N (2007), Schnur N (2007), Oh YM (2009), Wan C (2015), Hein MY (2015), Chen TC (2014), Huttlin EL (2017)	48
SMARCA2	17	SAP30	1	affinity chromatography technology	Nakamura T (2002)	1
HDAC1	4	HIST3H3	0	enzymatic study, unspecified method	Shi Y (2003), Vermeulen M (2010)	2
GATAD1	0	MORF4L2	0	affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Varier RA (2016)	2
SIN3B	5	SETDB1	3	affinity chromatography technology	Yang L (2003)	1
MORF4L1	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Wan C (2015), Huttlin EL (2017)	4
MORF4L1	1	ZNF131	0	affinity chromatography technology	Hayakawa T (2007)	1
PHF12	6	SIN3B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Hein MY (2015), Varier RA (2016)	3
SIN3A	13	ARID4A	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Lai A (2001), Lai A (2001), Suryadinata R (2011), Wan C (2015)	4
HDAC1	4	MYT1	2	affinity chromatography technology	Romm E (2005)	1
SIN3A	13	IKZF1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (2002), Koipally J (1999), Koipally J (2002), Koipally J (2002)	4
MRGBP	0	MORF4L2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, biochemical, affinity chromatography technology	Cai Y (2003), Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2010), Rolland T (2014), Wan C (2015), Huttlin EL (2017)	8
SAP30	1	SUDS3	3	affinity chromatography technology	Hein MY (2015)	1
ESR1	0	KDM5A	6	pull down, affinity chromatography technology	Chan SW (2001), Chan SW (2001)	2
SAP30	1	RBBP7	1	affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1999), Kuzmichev A (2002), Lai A (2001), Zhang Y (1998), Zhang Y (1998), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	11
PHF23	3	SAP130	2	affinity chromatography technology	Huttlin EL (2017)	1
HCFC1	4	SUDS3	3	affinity chromatography technology, affinity chromatography technology	Wysocka J (2003), Wysocka J (2003)	2
SIN3B	5	SMARCA2	17	pull down	Pal S (2003)	1
SIN3B	5	RNF220	2	affinity chromatography technology, pull down, enzymatic study	Kong Q (2010), Kong Q (2010), Kong Q (2010)	3
SAP25	1	SIN3B	5	affinity chromatography technology	Shiio Y (2006)	1
ARID4A	3	RBBP4	3	affinity chromatography technology	Lai A (2001)	1
SOX2	4	SIN3A	13	affinity chromatography technology	Engelen E (2011)	1
RBBP7	1	SIN3B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	4
SIN3A	13	SMN1	0	affinity chromatography technology	Zou J (2004)	1
IKZF4	1	IKZF1	2	two hybrid, pull down, affinity chromatography technology	Honma Y (1999), Perdomo J (2000), Huttlin EL (2017)	3
FOXK2	9	EMSY	3	affinity chromatography technology	Li X (2015)	1
SIN3A	13	SMARCE1	1	pull down	Pal S (2003)	1
SAP25	1	SAP130	2	affinity chromatography technology	Shiio Y (2006)	1
HDAC9	7	SIN3B	5	pull down	Petrie K (2003)	1
GATAD1	0	ING2	0	affinity chromatography technology	Varier RA (2016)	1
REST	3	SIN3B	5	affinity chromatography technology	Murai K (2004)	1
CBFA2T3	3	ZBTB4	6	two hybrid	Barrett CW (2012)	1
NSD2	9	HDAC2	1	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Marango J (2008), Marango J (2008), Kim JY (2008), Kim JY (2008)	4
MORF4L2	0	IKZF1	2	two hybrid	Rolland T (2014)	1
HDAC1	4	PBX1	9	affinity chromatography technology, affinity chromatography technology	Saleh M (2000), Saleh M (2000)	2
SIN3A	13	NSD2	9	affinity chromatography technology, affinity chromatography technology	Marango J (2008), Marango J (2008)	2
GATAD1	0	ARID4A	3	affinity chromatography technology	Varier RA (2016)	1
FOXK2	9	ING2	0	affinity chromatography technology	Li X (2015)	1
REST	3	SIN3A	13	affinity chromatography technology, affinity chromatography technology	Huang Y (1999), Formisano L (2011)	2
FOXK2	9	ARID4A	3	affinity chromatography technology	Li X (2015)	1
AR	3	SMARCE1	1	pull down, pull down, bioid	Link KA (2008), Link KA (2005), Lempiaeinen JK (2017)	3
HDAC1	4	BRMS1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Liu Y (2006), Hurst DR (2006), Bantscheff M (2011), Joshi P (2013), Meehan WJ (2004), Meehan WJ (2004), Hein MY (2015), Huttlin EL (2017)	8
ZBTB4	6	SIN3A	13	affinity chromatography technology	Weber A (2008)	1
SINHCAF	0	SIN3A	13	affinity chromatography technology	Huttlin EL (2017)	1
BRMS1	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Meehan WJ (2004), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
HCFC1	4	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Wysocka J (2003), Wysocka J (2003)	2
BRMS1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hurst DR (2006), Bantscheff M (2011), Joshi P (2013), Meehan WJ (2004), Meehan WJ (2004)	5
HDAC1	4	CIITA	4	pull down	Zika E (2003)	1
SINHCAF	0	SUDS3	3	affinity chromatography technology	Huttlin EL (2017)	1
HIST3H3	0	PHF12	6	unspecified method	Vermeulen M (2010)	1
GATAD1	0	SAP130	2	affinity chromatography technology	Varier RA (2016)	1
AR	3	SMARCA4	19	affinity chromatography technology, two hybrid, affinity chromatography technology, bioid	Wang Q (2004), van de Wijngaart DJ (2009), Dai Y (2008), Lempiaeinen JK (2017)	4
GATAD1	0	MORF4L1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Huttlin EL (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	5
RBBP4	3	RBBP7	1	biochemical, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Kristensen AR (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	7
SMARCE1	1	ESR1	0	affinity chromatography technology, pull down, pull down, pull down	Belandia B (2002), Belandia B (2002), Kiskinis E (2006), Flajollet S (2007)	4
USP37	1	HDAC2	1	bioid	Yeh C (2015)	1
SAP130	2	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Xue Y (1998), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	5
FOXK2	9	BRMS1	1	affinity chromatography technology	Li X (2015)	1
COPS2	5	TP53	0	affinity chromatography technology	Huang X (2005)	1
EMSY	3	ZNF131	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Varier RA (2016), Varier RA (2016), Varier RA (2016), Varier RA (2016), Varier RA (2016)	5
NSD2	9	AR	3	affinity chromatography technology, two hybrid, pull down, affinity chromatography technology	Kang HB (2009), Kang HB (2009), Kang HB (2009), Kang HB (2009)	4
SAP30	1	FOXK2	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Hein MY (2015), Li X (2015), Shan L (2016), Shan L (2016), Shan L (2016)	5
HIST3H3	0	MORF4L1	1	unspecified method	Vermeulen M (2010)	1
MRGBP	0	SIN3B	5	affinity chromatography technology	Hayakawa T (2007)	1
HIST3H3	0	KDM5A	6	unspecified method	Vermeulen M (2010)	1
GATAD1	0	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Varier RA (2016), Varier RA (2016), Varier RA (2016)	5
SMN1	0	ZBTB16	4	two hybrid	Vinayagam A (2011)	1
HDAC9	7	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Zhou X (2000), Morrison BE (2006), Sparrow DB (1999), Sparrow DB (1999)	4
SIN3B	5	PNPLA8	2	affinity chromatography technology	Hein MY (2015)	1
ING2	0	SAP30	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Hein MY (2015), Huttlin EL (2017)	3
SIN3A	13	HDAC9	7	affinity chromatography technology, pull down	Koipally J (2002), Petrie K (2003)	2
ING2	0	BRMS1	1	affinity chromatography technology	Huttlin EL (2017)	1
ARID4A	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lai A (2001), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	4
HIST3H3	0	RBBP7	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method	Campos EI (2010), Campos EI (2010), Campos EI (2010), Yoon HG (2005), Li X (2012)	5
ZBTB16	4	SIN3B	5	pull down, affinity chromatography technology, affinity chromatography technology, two hybrid	David G (1998), David G (1998), David G (1998), David G (1998)	4
HCFC1	4	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Wysocka J (2003), Wysocka J (2003)	2
SMARCB1	1	RBBP4	3	biochemical	Sif S (2001)	1
ESR1	0	FOXK2	9	affinity chromatography technology, affinity chromatography technology, two hybrid, pull down	Liu Y (2015), Liu Y (2015), Liu Y (2015), Liu Y (2015)	4
ZBTB16	4	TP53	0	affinity chromatography technology, affinity chromatography technology	Choi WI (2014), Choi WI (2014)	2
IKZF1	2	IKZF3	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim J (1999), Hung KH (2016), Hung KH (2016), Huttlin EL (2017)	4
IKZF2	3	SIN3A	13	affinity chromatography technology	Koipally J (2002)	1
ZBTB16	4	ESR1	0	pull down	Martin PJ (2003)	1
MYO5C	8	SIN3B	5	affinity chromatography technology	Hein MY (2015)	1
SIN3B	5	IKZF1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (1999), Koipally J (2002), Koipally J (2002)	3
ZBTB4	6	SIN3B	5	affinity chromatography technology	Weber A (2008)	1
SMARCE1	1	REST	3	affinity chromatography technology	Battaglioli E (2002)	1
SMARCA4	19	PBX1	9	affinity chromatography technology	de la Serna IL (2005)	1
SOX2	4	FOXK2	9	affinity chromatography technology	Cox JL (2013)	1
ARID4A	3	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lai A (2001), Huttlin EL (2015), Huttlin EL (2017)	3
TFAP4	3	TP53	0	affinity chromatography technology	Ku WC (2009)	1
MORF4L1	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Huttlin EL (2015), Huttlin EL (2017)	4
NR1D2	1	HDAC1	4	pull down, pull down	Muscat GE (1998), Wang J (2008)	2
KDM5A	6	HDAC2	1	affinity chromatography technology	Hayakawa T (2007)	1
SIN3A	13	BRMS1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Hurst DR (2013), Meehan WJ (2004), Meehan WJ (2004)	4
ESR1	0	HDAC9	7	pull down	van Rooij E (2010)	1
SMARCE1	1	IKZF1	2	affinity chromatography technology	ONeill DW (2000)	1
HDAC2	1	HIST3H3	0	enzymatic study	Shi Y (2003)	1
SINHCAF	0	BRMS1	1	affinity chromatography technology	Huttlin EL (2017)	1
AR	3	SMARCA2	17	two hybrid, affinity chromatography technology, bioid	van de Wijngaart DJ (2009), Dai Y (2008), Lempiaeinen JK (2017)	3
FOXK2	9	SIN3A	13	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, pull down	Li X (2015), Ji Z (2014), Ji Z (2014), Shan L (2016), Shan L (2016), Shan L (2016), Shan L (2016)	7
HDAC1	4	IKZF2	3	affinity chromatography technology	Joshi P (2013)	1
SAP30	1	ARID4A	3	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Lai A (2001), Lai A (2001), Suryadinata R (2011), Suryadinata R (2011), Hein MY (2015)	5
PHF12	6	ZNF131	0	affinity chromatography technology, affinity chromatography technology	Varier RA (2016), Varier RA (2016)	2
BRMS1	1	SMARCE1	1	two hybrid, affinity chromatography technology	Hurst DR (2006), Hurst DR (2006)	2
SIN3B	5	NSD2	9	affinity chromatography technology, affinity chromatography technology	Todoerti K (2005), Todoerti K (2005)	2
SAP30	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, pull down, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huang NE (2003), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1999), Zhang Y (1999), Swanson KA (2004), Yochum GS (2001), Kuzmichev A (2002), Kuzmichev A (2002), Viiri KM (2006), Binda O (2008), Lai A (2001), Skowyra D (2001), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	24
REST	3	SMARCA4	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ooi L (2006), Battaglioli E (2002), Battaglioli E (2002)	3
MORF4L2	0	SIN3A	13	affinity chromatography technology	Yochum GS (2002)	1
SIN3B	5	EMSY	3	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Varier RA (2016)	2
SUDS3	3	SIN3B	5	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Alland L (2002), Alland L (2002), Alland L (2002), Huttlin EL (2015), Huttlin EL (2017)	5
IKZF3	1	SIN3B	5	affinity chromatography technology	Koipally J (2002)	1
IKZF3	1	HDAC2	1	affinity chromatography technology	Koipally J (2002)	1
EMSY	3	RBBP7	1	affinity chromatography technology	Varier RA (2016)	1
PHF23	3	SIN3B	5	affinity chromatography technology	Huttlin EL (2017)	1
HIST3H3	0	RBBP4	3	affinity chromatography technology, unspecified method, unspecified method	Campos EI (2010), Li X (2012), Vermeulen M (2010)	3
SIN3B	5	SMARCA4	19	pull down	Pal S (2003)	1
ESR1	0	RBBP4	3	pull down, affinity chromatography technology	Creekmore AL (2008), Tarallo R (2011)	2
GATAD1	0	BRMS1	1	affinity chromatography technology	Varier RA (2016)	1
CBFA2T3	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Hoogeveen AT (2002), Amann JM (2001)	2
IKZF2	3	SIN3B	5	affinity chromatography technology	Koipally J (2002)	1
AR	3	SIN3B	5	affinity chromatography technology	Zhu P (2006)	1
GATAD1	0	SIN3A	13	affinity chromatography technology	Varier RA (2016)	1
HIST3H3	0	EMSY	3	unspecified method	Vermeulen M (2010)	1
IKZF4	1	SIN3A	13	affinity chromatography technology	Koipally J (2002)	1
REST	3	HDAC2	1	affinity chromatography technology	Tahiliani M (2007)	1
HDAC1	4	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
SAP25	1	HDAC2	1	affinity chromatography technology	Shiio Y (2006)	1
SOX2	4	HDAC1	4	affinity chromatography technology	Engelen E (2011)	1
SMARCB1	1	MXI1	2	two hybrid	Daakour S (2016)	1
TFAP4	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Ku WC (2009), Ku WC (2009)	2
MORF4L1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Hayakawa T (2007), Hayakawa T (2010), Doyon Y (2004), Wan C (2015)	4
SMARCB1	1	HDAC1	4	biochemical	Sif S (2001)	1
BRMS1	1	RBBP4	3	affinity chromatography technology	Meehan WJ (2004)	1
SINHCAF	0	SAP130	2	affinity chromatography technology	Huttlin EL (2017)	1
EMSY	3	MORF4L2	0	affinity chromatography technology	Varier RA (2016)	1
IKZF1	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (2002), Kim J (1999), Kim J (1999)	3
HCFC1	4	RBBP7	1	affinity chromatography technology	Wysocka J (2003)	1
HDAC1	4	TNRC18	8	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
ESR1	0	ZNF131	0	affinity chromatography technology, affinity chromatography technology	Oh Y (2013), Oh Y (2013)	2
PHF12	6	EMSY	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Varier RA (2016), Varier RA (2016)	3
PHF23	3	SUDS3	3	affinity chromatography technology	Huttlin EL (2017)	1
SIN3B	5	TNRC18	8	affinity chromatography technology	Hein MY (2015)	1
SMARCA4	19	RBBP4	3	biochemical	Sif S (2001)	1
SIN3A	13	TP53	0	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Murphy M (1999), Murphy M (1999), Murphy M (1999), Zilfou JT (2001)	4
ZBTB16	4	HDAC1	4	pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down	Chauchereau A (2004), David G (1998), David G (1998), David G (1998), David G (1998), Wong CW (1998), Melnick A (2002), Melnick A (2002), Puccetti E (2005), Thirkettle HJ (2009), Choi WI (2014), Girard N (2013)	12
SOX2	4	TNRC18	8	affinity chromatography technology	Cox JL (2013)	1
ING2	0	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006)	2
IKZF1	2	SMARCA4	19	pull down	Kim J (1999)	1
AURKA	1	HIST3H3	0	enzymatic study, enzymatic study, enzymatic study	Ban R (2011), Molli PR (2010), Fu J (2009)	3
NSD2	9	SMN1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Mirabella F (2014), Mirabella F (2014), Mirabella F (2014)	3
TP53	0	ESR1	0	pull down, affinity chromatography technology, affinity chromatography technology	Liu G (2000), Duong V (2007), Saxena R (2016)	3
TP53	0	SMARCA4	19	pull down, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lee D (2002), Lee D (2002), Lee D (2002), Napolitano MA (2007), Guan B (2011), Oh J (2008)	6
NSD2	9	ESR1	0	enzymatic study	Zhang X (2013)	1
SIN3B	5	SMARCB1	1	pull down	Pal S (2003)	1
GATAD1	0	RBBP4	3	affinity chromatography technology	Varier RA (2016)	1
SIN3A	13	SETDB1	3	affinity chromatography technology	Yang L (2003)	1
AR	3	ZBTB16	4	two hybrid	van de Wijngaart DJ (2009)	1
ING2	0	SIN3B	5	affinity chromatography technology	Huttlin EL (2017)	1
BRMS1	1	SUDS3	3	two hybrid, affinity chromatography technology, two hybrid	Hurst DR (2006), Hurst DR (2006), Meehan WJ (2004)	3
FOXK2	9	SAP130	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Li X (2015), Shan L (2016), Shan L (2016), Shan L (2016)	4
SMARCA2	17	RBBP4	3	biochemical, affinity chromatography technology	Sif S (2001), Nakamura T (2002)	2
ZBTB16	4	HDAC2	1	pull down	Chauchereau A (2004)	1
PHF12	6	KDM5A	6	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Varier RA (2016)	2
IKZF1	2	MORF4L1	1	two hybrid	Rolland T (2014)	1
SMARCA4	19	CIITA	4	pull down, pull down	Mudhasani R (2002), Mudhasani R (2002)	2
IKZF2	3	IKZF1	2	affinity chromatography technology, affinity chromatography technology	Kelley CM (1998), Huttlin EL (2017)	2
CBFA2T3	3	SIN3B	5	affinity chromatography technology	Olsson A (2008)	1
PHF23	3	SAP30	1	affinity chromatography technology	Huttlin EL (2017)	1
FOXK2	9	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Li X (2015), Shan L (2016), Shan L (2016), Shan L (2016)	4
SINHCAF	0	ING2	0	affinity chromatography technology	Huttlin EL (2017)	1
SMARCE1	1	HDAC1	4	affinity chromatography technology	Battaglioli E (2002)	1
MORF4L1	1	EMSY	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Varier RA (2016), Huttlin EL (2017)	3
HDAC1	4	NSD2	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Todoerti K (2005), Todoerti K (2005), Marango J (2008), Marango J (2008), Kim JY (2008), Kim JY (2008), Min DJ (2013)	7
IKZF4	1	SIN3B	5	affinity chromatography technology	Koipally J (2002)	1
SAP30	1	TNRC18	8	affinity chromatography technology	Hein MY (2015)	1
RBBP7	1	SIN3A	13	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Kuzmichev A (2002), Nakamura T (2002), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	6
HIST3H3	0	SIN3B	5	unspecified method	Vermeulen M (2010)	1
SMARCA2	17	SMARCE1	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Wang W (1996), Pal S (2003), Tando T (2010), Mak AB (2010), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	8
IKZF1	2	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Kim J (1999), Kim J (1999)	2
HIST3H3	0	ING2	0	pull down, unspecified method	Varier RA (2010), Yang SY (2012)	2
SMARCB1	1	IKZF3	1	two hybrid	Daakour S (2016)	1
GATAD1	0	SAP30	1	affinity chromatography technology	Varier RA (2016)	1
GATAD1	0	ZNF131	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Varier RA (2016), Varier RA (2016), Varier RA (2016), Varier RA (2016)	4
SIN3B	5	STX3	3	affinity chromatography technology	Hein MY (2015)	1
RBBP7	1	SAP130	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
KLF16	1	SIN3A	13	pull down, pull down, affinity chromatography technology, affinity chromatography technology	Zhang JS (2001), Kaczynski JA (2002), Kaczynski JA (2002), Daftary GS (2011)	4
COPS2	5	SIN3A	13	affinity chromatography technology, pull down, pull down, two hybrid	Dressel U (1999), Moehren U (2004), Moehren U (2004), Moehren U (2004)	4
SUDS3	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Alland L (2002), Joshi P (2013), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	6
GATAD1	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Huttlin EL (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	5
TP53	0	AURKA	1	two hybrid, affinity chromatography technology, affinity chromatography technology, pull down, genetic interference, pull down, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology	Chen SS (2002), Chen SS (2002), Chen SS (2002), Chen SS (2002), Chen SS (2002), Katayama H (2004), Katayama H (2004), Katayama H (2004), Katayama H (2004), Hsueh KW (2013), Huttlin EL (2015), Huttlin EL (2017)	12
SAP30	1	SIN3B	5	biochemical, affinity chromatography technology, affinity chromatography technology	Zhang Y (1999), Hein MY (2015), Hein MY (2015)	3
SINHCAF	0	SIN3B	5	affinity chromatography technology	Huttlin EL (2017)	1
ING2	0	SUDS3	3	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Huttlin EL (2017)	2
SMARCB1	1	SMARCA4	19	biochemical, biochemical, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, genetic interference, affinity chromatography technology, affinity chromatography technology	Sif S (2001), Sullivan EK (2001), Wang W (1996), Wang W (1996), Otsuki T (2001), Zhao K (1998), Reyes JC (1997), Kaeser MD (2008), Kaeser MD (2008), Kaeser MD (2008), Kaeser MD (2008), Pal S (2003), Bultman SJ (2005), Gong F (2008), Medjkane S (2004), Ito T (2008), Sif S (1998), Dallas PB (1998), Tando T (2010), Bakshi R (2010), Bakshi R (2010), Mahmoudi T (2006), Mahmoudi T (2006), Bartlett C (2011), Nishimoto N (2012), Havugimana PC (2012), Wan C (2015), Shen JP (2017), Pchelintsev NA (2013), Pchelintsev NA (2013)	30
SAP30	1	PHF12	6	affinity chromatography technology	Yochum GS (2001)	1
PBX1	9	SIN3B	5	affinity chromatography technology	Saleh M (2000)	1
SIN3B	5	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Romm E (2005), Bantscheff M (2011)	2
SMARCA4	19	SMARCA2	17	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Reyes JC (1997), Pal S (2003), Ito T (2008), Ito T (2008), Havugimana PC (2012)	5
SMARCA2	17	RBBP7	1	affinity chromatography technology	Nakamura T (2002)	1
TP53	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, imaging technique, affinity chromatography technology, affinity chromatography technology, imaging technique	Ito A (2002), Wang C (2005), Dohi Y (2008), Jin W (2008), Lei Q (2006), Wu Y (2001), Wu Y (2001), Luo J (2000), Juan LJ (2000), Juan LJ (2000), Juan LJ (2000), Murphy M (1999), Insinga A (2004), Sun JM (2007), Yu XY (2010), Sinha S (2010), Sinha S (2010), Li Y (2012), Di Agostino S (2006), Pavithra L (2009), Pavithra L (2009), Luo J (2000), Chen TC (2014), Park EK (2015), Park EK (2015), Park EK (2015)	26
AR	3	TP53	0	genetic interference	Shenk JL (2001)	1
SOX2	4	SMARCA2	17	affinity chromatography technology	Cox JL (2013)	1
MORF4L2	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2010), Wan C (2015)	4
SIN3B	5	MXI1	2	affinity chromatography technology	Dugast-Darzacq C (2004)	1
SUDS3	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Joshi P (2013)	2
SMARCB1	1	SMARCA2	17	biochemical, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, biochemical	Sif S (2001), Wang W (1996), Wang W (1996), Pal S (2003), Nakamura T (2002), Ito T (2008), Sif S (1998), Havugimana PC (2012), Wan C (2015)	9
FOXK2	9	PHF23	3	affinity chromatography technology	Li X (2015)	1
IKZF3	1	SIN3A	13	affinity chromatography technology	Koipally J (2002)	1
HDAC2	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Adenuga D (2010), Xue Y (1998), Havugimana PC (2012), Bantscheff M (2011), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017), Hauri S (2016)	9
IKZF2	3	HDAC2	1	affinity chromatography technology	Koipally J (2002)	1
SAP25	1	RBBP7	1	affinity chromatography technology	Shiio Y (2006)	1
SINHCAF	0	ARID4A	3	affinity chromatography technology	Huttlin EL (2017)	1
TP53	0	RBBP4	3	affinity chromatography technology	Fogeron ML (2013)	1
GATAD1	0	SUDS3	3	affinity chromatography technology	Varier RA (2016)	1
SMN1	0	RBBP4	3	two hybrid	Vinayagam A (2011)	1
SIN3B	5	ACTN4	4	affinity chromatography technology	Hein MY (2015)	1
ING2	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Huttlin EL (2017)	2
HDAC1	4	SMARCA4	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, genetic interference	Qiu Z (2008), Battaglioli E (2002), Hang CT (2010), DiRenzo J (2000)	4
SIN3A	13	RBBP4	3	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hassig CA (1997), Zhang Y (1998), Nakamura T (2002), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Bantscheff M (2011), Hauri S (2016)	8
MORF4L2	0	ZNF131	0	affinity chromatography technology	Hayakawa T (2007)	1
SINHCAF	0	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016)	2
HDAC2	1	SMN1	0	affinity chromatography technology	Zou J (2004)	1
FOXK2	9	KDM5A	6	affinity chromatography technology	Li X (2015)	1
TP53	0	HDAC2	1	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li P (2010), Insinga A (2004), Sun JM (2007), Tian B (2011), Adenuga D (2010), Brandl A (2012)	6
HDAC1	4	REST	3	pull down, affinity chromatography technology	Gocke CB (2008), Huang Y (1999)	2
IKZF3	1	IKZF4	1	pull down, affinity chromatography technology, affinity chromatography technology	Perdomo J (2000), Huttlin EL (2015), Huttlin EL (2017)	3
SMARCB1	1	HDAC2	1	biochemical, biochemical	Sif S (2001), Havugimana PC (2012)	2
SMARCA4	19	SMARCE1	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Wang W (1996), Zhao K (1998), Zhao K (1998), Hu K (2006), Kaeser MD (2008), Kaeser MD (2008), Kaeser MD (2008), Kaeser MD (2008), Pal S (2003), Bultman SJ (2005), Battaglioli E (2002), ONeill DW (2000), Tando T (2010), Mak AB (2010), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	18
ZNF131	0	SIN3B	5	affinity chromatography technology	Varier RA (2016)	1
TFAP4	3	SIN3B	5	affinity chromatography technology	Ku WC (2009)	1
HIST3H3	0	SIN3A	13	unspecified method	Vermeulen M (2010)	1
MORF4L2	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010)	2
SMARCB1	1	SMARCE1	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Wang W (1996), Zhao K (1998), Kaeser MD (2008), Kaeser MD (2008), Kaeser MD (2008), Kaeser MD (2008), Chen J (2005), Mak AB (2010), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	12
SIN3B	5	SMN1	0	affinity chromatography technology	Zou J (2004)	1
MORF4L1	1	MRGBP	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, biochemical, affinity chromatography technology	Bowman BR (2006), Cai Y (2003), Sardiu ME (2008), Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2010), Sy SM (2009), Rolland T (2014), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	12
IKZF1	2	LSM4	1	two hybrid	Rolland T (2014)	1
HDAC1	4	EMSY	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	4
BRMS1	1	ARID4A	3	affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology	Hurst DR (2008), Hurst DR (2006), Meehan WJ (2004), Meehan WJ (2004)	4
TFAP4	3	SMARCB1	1	affinity chromatography technology	Ku WC (2009)	1
NR1D2	1	SIN3B	5	pull down	Muscat GE (1998)	1
GATAD1	0	PHF12	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Hein MY (2015), Varier RA (2016), Varier RA (2016)	5
ING2	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Shi X (2006), Binda O (2008), Joshi P (2013), Huttlin EL (2017)	6
KDM5A	6	SIN3B	5	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hein MY (2015)	2
SIN3B	5	LSM4	1	affinity chromatography technology	Hein MY (2015)	1
TP53	0	ING2	0	affinity chromatography technology	Pedeux R (2005)	1
SMARCA2	17	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology	Sif S (2001), Pal S (2003), Nakamura T (2002)	3
ING2	0	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Shi X (2006), Huttlin EL (2017)	4
MYO5C	8	ACTN4	4	affinity chromatography technology	Hein MY (2015)	1
SIN3B	5	MYT1	2	affinity chromatography technology	Romm E (2005)	1
ING2	0	SAP130	2	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Huttlin EL (2017)	2
HCFC1	4	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology	Yokoyama A (2004), Wysocka J (2003), Wysocka J (2003), Wysocka J (2003), Mangone M (2010)	5
SAP130	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Xue Y (1998), Joshi P (2013)	3
GATAD1	0	SINHCAF	0	affinity chromatography technology	Varier RA (2016)	1
SAP30	1	HDAC2	1	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Zhang Y (1999), Kuzmichev A (2002), Viiri KM (2006), Lai A (2001), Zhang Y (1998), Zhang Y (1998), Adenuga D (2010), Xue Y (1998), Bantscheff M (2011), Hein MY (2015)	11
SMARCA4	19	SIN3A	13	biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Sif S (2001), Sif S (2001), Kuzmichev A (2002), Kuzmichev A (2002), Qiu Z (2008), Xu Z (2006), Pal S (2003), Pal S (2003)	8
HDAC1	4	RBBP7	1	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Ng HH (1999), Zhang Y (1999), Zhang Y (1997), Banach-Orlowska M (2009), Humphrey GW (2001), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Wan C (2015), Hein MY (2015), Yeh HH (2015), Yeh HH (2015), Huttlin EL (2017), Hauri S (2016)	19
RBBP7	1	SINHCAF	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	3
FOXK2	9	HCFC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, pull down	Okino Y (2015), Li X (2015), Ji Z (2014), Ji Z (2014), Ji Z (2014)	5
RBBP4	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (2003), Yao YL (2003), Nicolas E (2001), Nicolas E (2001), Grozinger CM (1999), You A (2001), Hassig CA (1997), Hassig CA (1997), Ng HH (1999), Zhang Y (1999), Zhang Y (2002), Hassig CA (1998), Zhang Y (1997), Banach-Orlowska M (2009), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Humphrey GW (2001), Zhang Y (1998), Zhang Y (1998), Sun JM (2007), Sun JM (2007), Karwowska-Desaulniers P (2007), Terhune SS (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	35
SIN3A	13	SUDS3	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Fleischer TC (2003), Fleischer TC (2003), Alland L (2002), Alland L (2002), Alland L (2002), Huttlin EL (2015), Huttlin EL (2017)	8
MORF4L1	1	PHF12	6	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kumar GS (2011), Hayakawa T (2007), Hayakawa T (2010), Sy SM (2009), Rolland T (2014), Huttlin EL (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	9
ZBTB16	4	SIN3A	13	pull down, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, pull down, affinity chromatography technology	David G (1998), David G (1998), David G (1998), David G (1998), Ward JO (2001), Wong CW (1998), Choi WI (2014)	7
SOX2	4	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Cox JL (2013)	2
SIN3A	13	PHF12	6	two hybrid, affinity chromatography technology, two hybrid, x-ray crystallography, pull down	Yochum GS (2001), Yochum GS (2001), Yochum GS (2001), Kumar GS (2011), Kumar GS (2011)	5
FOXK2	9	TP53	0	affinity chromatography technology	Li X (2015)	1
TP53	0	RBBP7	1	affinity chromatography technology	Fogeron ML (2013)	1
HIST3H3	0	SMN1	0	unspecified method	Yang Y (2010)	1
HDAC1	4	IKZF1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (1999), Koipally J (2002), Kim J (1999), Kim J (1999), Joshi P (2013)	5
RBBP7	1	FOXK2	9	affinity chromatography technology, affinity chromatography technology, pull down	Huttlin EL (2015), Huttlin EL (2017), Shan L (2016)	3
SOX2	4	SAP130	2	affinity chromatography technology	Cox JL (2013)	1
TFAP4	3	SMARCE1	1	affinity chromatography technology	Ku WC (2009)	1
AR	3	COPS2	5	two hybrid, pull down, affinity chromatography technology	Moehren U (2007), Moehren U (2007), Moehren U (2007)	3
ING2	0	ARID4A	3	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Huttlin EL (2017)	2
ESR1	0	SIN3B	5	affinity chromatography technology	Zhu P (2006)	1
SMARCA2	17	ESR1	0	two hybrid	Ichinose H (1997)	1
SIN3A	13	ESR1	0	affinity chromatography technology, affinity chromatography technology	Ellison-Zelski SJ (2009), Zhu P (2006)	2
AR	3	SIN3A	13	affinity chromatography technology	Zhu P (2006)	1
TFAP4	3	SAP130	2	affinity chromatography technology	Ku WC (2009)	1
FOXK2	9	TFAP4	3	affinity chromatography technology, affinity chromatography technology	Li X (2015), Huttlin EL (2017)	2
SIN3A	13	SAP130	2	affinity chromatography technology, affinity chromatography technology, biochemical	Fleischer TC (2003), Fleischer TC (2003), Wan C (2015)	3
SAP25	1	BRMS1	1	affinity chromatography technology	Shiio Y (2006)	1
SAP30	1	SINHCAF	0	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017)	2
KLF16	1	SIN3B	5	affinity chromatography technology	Daftary GS (2011)	1
USP37	1	HDAC1	4	bioid	Yeh C (2015)	1
SIN3B	5	SMARCE1	1	pull down	Pal S (2003)	1
MORF4L2	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010)	2
MORF4L1	1	SIN3B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Sy SM (2009), Huttlin EL (2015), Huttlin EL (2017)	5
MORF4L1	1	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2007), Huttlin EL (2015), Huttlin EL (2017)	5
FOXK2	9	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Ji Z (2014), Huttlin EL (2017), Shan L (2016), Shan L (2016), Shan L (2016)	5
ZNF131	0	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Varier RA (2016), Varier RA (2016), Varier RA (2016)	3
FOXK2	9	SUDS3	3	affinity chromatography technology	Li X (2015)	1
PHF12	6	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yochum GS (2001), Joshi P (2013), Hein MY (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	6
SMARCB1	1	SIN3A	13	biochemical, pull down, affinity chromatography technology	Sif S (2001), Pal S (2003), Nakamura T (2002)	3
HDAC2	1	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (2003), Fleischer TC (2003), Fleischer TC (2003), Hakimi MA (2003), Yang L (2003), Laherty CD (1997), Zhang Y (2002), Tong JK (1998), Zhang Y (2005), Nakamura T (2002), Sekhavat A (2007), Zou J (2004), Sun JM (2007), Xue Y (1998), Tsai SC (2002), Brandl A (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hsu DS (2014)	20
BRMS1	1	SIN3B	5	affinity chromatography technology, affinity chromatography technology	Meehan WJ (2004), Meehan WJ (2004)	2
SMN1	0	LSM4	1	pull down	Friesen WJ (2000)	1
RBBP7	1	KDM5A	6	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SMARCA4	19	ESR1	0	two hybrid, pull down	Ichinose H (1997), DiRenzo J (2000)	2
SIN3B	5	AKAP12	4	affinity chromatography technology	Hein MY (2015)	1
SMARCE1	1	HDAC2	1	affinity chromatography technology	Battaglioli E (2002)	1
SAP30	1	RBBP4	3	affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1999), Kuzmichev A (2002), Lai A (2001), Zhang Y (1998), Zhang Y (1998), Hauri S (2016)	8