PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000265843	[[108376157, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412539], [108464144, 108464374]]	[[108380263, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412539], [108464144, 108464263]]
ENST00000443411	[[108376158, 108385602], [108388961, 108389100], [108408689, 108408934]]	[[108380263, 108385602], [108388961, 108389028]]
ENST00000428840	[[108376158, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412539], [108422746, 108422932]]	[[108380263, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412430]]
ENST00000525344	[[108379675, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412539], [108464144, 108464231], [108464449, 108464465]]	[[108380263, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412539], [108464144, 108464231], [108464449, 108464460]]
ENST00000526312	[[108380805, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412539], [108422746, 108422932]]	[[108380805, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412430]]
ENST00000533052	[[108382093, 108385602], [108388961, 108389100], [108408689, 108408934]]	[[108382093, 108385602], [108388961, 108389028]]
ENST00000524840	[[108384133, 108385602], [108388961, 108389100], [108398862, 108398911], [108408689, 108408914]]	None
ENST00000531386	[[108398889, 108398911], [108409750, 108409913], [108412378, 108412539], [108438644, 108438853]]	[[108398889, 108398911], [108409750, 108409913], [108412378, 108412430]]
NM_001144764	[[108376157, 108385602], [108388961, 108389100], [108398862, 108398911], [108408689, 108408934]]	[[108380263, 108385602], [108388961, 108389100], [108398862, 108398886]]
NM_001144765	[[108376157, 108385602], [108388961, 108389100], [108408689, 108408934]]	[[108380263, 108385602], [108388961, 108389028]]
NM_001144763	[[108376157, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412539], [108422746, 108422932]]	[[108380263, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412430]]
NM_015065	[[108376157, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412539], [108464144, 108464374]]	[[108380263, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412539], [108464144, 108464263]]
NM_001308019	[[108376157, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412539], [108464144, 108464231], [108464449, 108464465]]	[[108380263, 108385602], [108388961, 108389100], [108398862, 108398911], [108409750, 108409913], [108412378, 108412539], [108464144, 108464231], [108464449, 108464460]]

Promoter

Chrom	Start	End	Description
chr11	108408895	108408924	CAGE_peak_3_at_EXPH5_5end
chr11	108422926	108422937	CAGE_peak_13_at_EXPH5_5end
chr11	108422950	108422961	CAGE_peak_14_at_EXPH5_5end
chr11	108438755	108438763	CAGE_peak_20_at_EXPH5_5end
chr11	108438847	108438891	CAGE_peak_4_at_EXPH5_5end
chr11	108438997	108439013	CAGE_peak_6_at_EXPH5_5end
chr11	108464194	108464201	CAGE_peak_12_at_EXPH5_5end
chr11	108464281	108464304	CAGE_peak_5_at_EXPH5_5end
chr11	108464321	108464380	CAGE_peak_1_at_EXPH5_5end
chr11	108464403	108464414	CAGE_peak_7_at_EXPH5_5end
chr11	108464444	108464449	CAGE_peak_16_at_EXPH5_5end
chr11	108464469	108464507	CAGE_peak_2_at_EXPH5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I108647	108647400	108648979	1.21	[{'connected_gene': 'ACAT1', 'score': 11.34}, {'connected_gene': 'ENSG00000255467', 'score': 11.34}, {'connected_gene': 'DDX10', 'score': 0.37}, {'connected_gene': 'EXPH5', 'score': 0.23}]
chr11	GH11I108592	108592001	108594553	2.39	[{'connected_gene': 'EXPH5', 'score': 550.77}, {'connected_gene': 'LOC203930', 'score': 5.19}, {'connected_gene': 'GC11M108506', 'score': 0.17}]
chr11	GH11I108570	108570648	108572880	0.62	[{'connected_gene': 'EXPH5', 'score': 5.78}, {'connected_gene': 'LOC203930', 'score': 5.22}, {'connected_gene': 'GC11M108506', 'score': 0.21}]
chr11	GH11I108620	108620594	108623038	0.8	[{'connected_gene': 'EXPH5', 'score': 0.31}, {'connected_gene': 'DDX10', 'score': 0.26}]
chr11	GH11I108624	108624175	108625241	0.54	[{'connected_gene': 'DDX10', 'score': 10.82}, {'connected_gene': 'ACAT1', 'score': 10.19}, {'connected_gene': 'ENSG00000255467', 'score': 10.19}, {'connected_gene': 'EXPH5', 'score': 0.29}]
chr11	GH11I108634	108634443	108636043	0.38	[{'connected_gene': 'DDX10', 'score': 11.27}, {'connected_gene': 'ACAT1', 'score': 9.99}, {'connected_gene': 'ENSG00000255467', 'score': 9.99}, {'connected_gene': 'EXPH5', 'score': 0.26}]
chr11	GH11I108608	108608887	108610808	0.6	[{'connected_gene': 'DDX10', 'score': 10.27}, {'connected_gene': 'EXPH5', 'score': 0.37}]
chr11	GH11I108606	108606214	108607223	0.63	[{'connected_gene': 'DDX10', 'score': 10.27}, {'connected_gene': 'EXPH5', 'score': 5.65}]
chr11	GH11I108549	108549934	108550063	0.2	[{'connected_gene': 'DDX10', 'score': 9.92}, {'connected_gene': 'EXPH5', 'score': 0.26}, {'connected_gene': 'GC11M108506', 'score': 0.26}]
chr11	GH11I108614	108614888	108618493	1.35	[{'connected_gene': 'DDX10', 'score': 11.09}, {'connected_gene': 'KDELC2', 'score': 10.9}, {'connected_gene': 'LOC203930', 'score': 4.35}, {'connected_gene': 'EXPH5', 'score': 1.97}]
chr11	GH11I108559	108559364	108563438	0.69	[{'connected_gene': 'KDELC2', 'score': 34.21}, {'connected_gene': 'EXPH5', 'score': 10.91}, {'connected_gene': 'ATM', 'score': 4.57}, {'connected_gene': 'GC11M108506', 'score': 0.23}]
chr11	GH11I108524	108524594	108524687	0.63	[{'connected_gene': 'KDELC2', 'score': 11.45}, {'connected_gene': 'GC11M108506', 'score': 0.37}, {'connected_gene': 'EXPH5', 'score': 0.2}]
chr11	GH11I108518	108518220	108519636	0.2	[{'connected_gene': 'KDELC2', 'score': 17.87}, {'connected_gene': 'GC11M108506', 'score': 0.39}, {'connected_gene': 'EXPH5', 'score': 0.19}]
chr11	GH11I108588	108588783	108590313	0.54	[{'connected_gene': 'KDELC2', 'score': 10.09}, {'connected_gene': 'LOC203930', 'score': 5.19}, {'connected_gene': 'EXPH5', 'score': 0.77}, {'connected_gene': 'GC11M108506', 'score': 0.18}]
chr11	GH11I108537	108537694	108539164	0.43	[{'connected_gene': 'KDELC2', 'score': 11.2}, {'connected_gene': 'DDX10', 'score': 10.2}, {'connected_gene': 'ATM', 'score': 6.79}, {'connected_gene': 'GC11M108506', 'score': 0.29}, {'connected_gene': 'EXPH5', 'score': 0.22}]
chr11	GH11I108551	108551023	108552990	1.07	[{'connected_gene': 'KDELC2', 'score': 31.3}, {'connected_gene': 'DDX10', 'score': 9.81}, {'connected_gene': 'EXPH5', 'score': 0.26}, {'connected_gene': 'GC11M108506', 'score': 0.26}]
chr11	GH11I108543	108543132	108544789	0.2	[{'connected_gene': 'KDELC2', 'score': 11.16}, {'connected_gene': 'DDX10', 'score': 10.19}, {'connected_gene': 'GC11M108506', 'score': 0.28}, {'connected_gene': 'EXPH5', 'score': 0.25}]
chr11	GH11I108511	108511544	108512573	0.38	[{'connected_gene': 'GC11M108506', 'score': 0.44}, {'connected_gene': 'LOC101928561', 'score': 0.39}, {'connected_gene': 'EXPH5', 'score': 0.18}]