PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000379562	[[7792924, 7798105], [7801852, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066], [7811178, 7811308], [7816793, 7816854], [7817713, 7817762], [7820800, 7820982], [7822018, 7822141], [7822226, 7822270], [7825043, 7825138], [7829782, 7829944]]	[[7798042, 7798105], [7801852, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066], [7811178, 7811308], [7816793, 7816854], [7817713, 7817762], [7820800, 7820982], [7822018, 7822141], [7822226, 7822270], [7825043, 7825138], [7829782, 7829896]]
ENST00000498098	[[7795187, 7795565], [7795914, 7796032], [7801852, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066]]	[[7796026, 7796032], [7801852, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066]]
ENST00000535925	[[7795275, 7795562], [7795914, 7796032], [7801852, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066], [7811178, 7811308], [7816793, 7816854], [7817713, 7817762], [7820800, 7820982], [7822018, 7822141], [7822226, 7822270], [7825043, 7825138], [7829782, 7829990]]	[[7796026, 7796032], [7801852, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066], [7811178, 7811308], [7816793, 7816854], [7817713, 7817762], [7820800, 7820982], [7822018, 7822141], [7822226, 7822270], [7825043, 7825138], [7829782, 7829896]]
ENST00000463666	[[7797776, 7798105], [7801852, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066], [7808298, 7808347]]	None
ENST00000471320	[[7797797, 7798105], [7801852, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808322]]	None
ENST00000543003	[[7801233, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066], [7811178, 7811308], [7816793, 7816854], [7817713, 7817762], [7820800, 7820982], [7822018, 7822141], [7822226, 7822270], [7829782, 7829953]]	[[7801786, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066], [7811178, 7811308], [7816793, 7816854], [7817713, 7817762], [7820800, 7820982], [7822018, 7822076]]
ENST00000460089	[[7803195, 7803410], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066], [7811178, 7811308], [7816793, 7816841]]	None
NM_012311	[[7792924, 7798105], [7801852, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066], [7811178, 7811308], [7816793, 7816854], [7817713, 7817762], [7820800, 7820982], [7822018, 7822141], [7822226, 7822270], [7825043, 7825138], [7829782, 7829990]]	[[7798042, 7798105], [7801852, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066], [7811178, 7811308], [7816793, 7816854], [7817713, 7817762], [7820800, 7820982], [7822018, 7822141], [7822226, 7822270], [7825043, 7825138], [7829782, 7829896]]
NR_045609	[[7792924, 7795562], [7795914, 7796032], [7801852, 7801953], [7804419, 7804519], [7805685, 7805754], [7808015, 7808066], [7811178, 7811308], [7816793, 7816854], [7817713, 7817762], [7820800, 7820982], [7822018, 7822141], [7822226, 7822270], [7825043, 7825138], [7829782, 7829990]]	None

Promoter

Chrom	Start	End	Description
chr10	7829909	7829963	CAGE_peak_1_at_KIN_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I007872	7872201	7872600	0.87	[{'connected_gene': 'TAF3', 'score': 10.83}, {'connected_gene': 'KIN', 'score': 9.89}, {'connected_gene': 'ATP5F1C', 'score': 5.23}, {'connected_gene': 'GC10P007866', 'score': 0.44}, {'connected_gene': 'GC10M007907', 'score': 0.26}]
chr10	GH10I007480	7480179	7486707	1.48	[{'connected_gene': 'SFMBT2', 'score': 9.53}, {'connected_gene': 'TAF3', 'score': 4.23}, {'connected_gene': 'KIN', 'score': 1.2}, {'connected_gene': 'GC10M007486', 'score': 0.77}, {'connected_gene': 'RNU6-535P', 'score': 0.77}, {'connected_gene': 'LOC105376388', 'score': 0.39}]
chr10	GH10I007406	7406729	7411687	2.47	[{'connected_gene': 'SFMBT2', 'score': 559.56}, {'connected_gene': 'KIN', 'score': 18.66}, {'connected_gene': 'TAF3', 'score': 1.27}, {'connected_gene': 'ENSG00000278982', 'score': 0.77}, {'connected_gene': 'GC10P007374', 'score': 0.29}]
chr10	GH10I007786	7786719	7790872	2.01	[{'connected_gene': 'ATP5F1C', 'score': 565.6}, {'connected_gene': 'KIN', 'score': 560.58}, {'connected_gene': 'ITIH2', 'score': 6.98}, {'connected_gene': 'GC10M007790', 'score': 0.44}]
chr10	GH10I008137	8137201	8138000	0.55	[{'connected_gene': 'GATA3', 'score': 13.47}, {'connected_gene': 'GATA3-AS1', 'score': 11.57}, {'connected_gene': 'ENSG00000232638', 'score': 11.56}, {'connected_gene': 'TAF3', 'score': 8.19}, {'connected_gene': 'KIN', 'score': 1.2}, {'connected_gene': 'PRPF38AP1', 'score': 0.34}, {'connected_gene': 'LOC105376395', 'score': 0.26}, {'connected_gene': 'GC10P008092', 'score': 0.25}, {'connected_gene': 'GC10M008036', 'score': 0.11}, {'connected_gene': 'GC10M008037', 'score': 0.11}]
chr10	GH10I008049	8049034	8065063	2.51	[{'connected_gene': 'GATA3', 'score': 555.85}, {'connected_gene': 'KIN', 'score': 65.97}, {'connected_gene': 'TAF3', 'score': 17.89}, {'connected_gene': 'SFMBT2', 'score': 9.94}, {'connected_gene': 'GATA3-AS1', 'score': 0.77}, {'connected_gene': 'ENSG00000232638', 'score': 0.44}, {'connected_gene': 'GC10P008092', 'score': 0.28}, {'connected_gene': 'GC10M008036', 'score': 0.07}, {'connected_gene': 'GC10M008037', 'score': 0.07}]
chr10	GH10I008043	8043638	8043787	0.49	[{'connected_gene': 'GATA3', 'score': 550.77}, {'connected_gene': 'KIN', 'score': 18.68}, {'connected_gene': 'GC10P008041', 'score': 0.77}, {'connected_gene': 'GC10M008036', 'score': 0.07}, {'connected_gene': 'GC10M008037', 'score': 0.07}]
chr10	GH10I007026	7026893	7031285	1.38	[{'connected_gene': 'KIN', 'score': 19.53}, {'connected_gene': 'RBM17', 'score': 11.36}, {'connected_gene': 'GC10M006973', 'score': 0.37}, {'connected_gene': 'LOC105376386', 'score': 0.2}, {'connected_gene': 'LOC105376387', 'score': 0.16}, {'connected_gene': 'GC10P006679', 'score': 0.05}]
chr10	GH10I008702	8702010	8703639	0.92	[{'connected_gene': 'KIN', 'score': 38.51}, {'connected_gene': 'TAF3', 'score': 10.39}, {'connected_gene': 'GC10P008711', 'score': 0.44}, {'connected_gene': 'GC10M008656', 'score': 0.25}, {'connected_gene': 'RNA5SP299', 'score': 0.25}, {'connected_gene': 'LOC105376400', 'score': 0.05}]
chr10	GH10I007608	7608902	7611671	1.19	[{'connected_gene': 'KIN', 'score': 19.6}, {'connected_gene': 'ITIH5', 'score': 10.88}, {'connected_gene': 'GC10M007594', 'score': 0.44}]
chr10	GH10I007229	7229779	7235664	1.17	[{'connected_gene': 'KIN', 'score': 16.18}, {'connected_gene': 'SFMBT2', 'score': 4.69}, {'connected_gene': 'ITIH2', 'score': 1.49}, {'connected_gene': 'GC10P007174', 'score': 0.22}, {'connected_gene': 'COX6CP17', 'score': 0.21}]
chr10	GH10I007767	7767148	7767818	0.31	[{'connected_gene': 'KIN', 'score': 12.71}, {'connected_gene': 'ATP5F1C', 'score': 12.71}, {'connected_gene': 'GC10P007759', 'score': 0.44}]
chr10	GH10I008080	8080520	8083029	0.49	[{'connected_gene': 'KIN', 'score': 21.45}, {'connected_gene': 'GATA3-AS1', 'score': 12.45}, {'connected_gene': 'ENSG00000232638', 'score': 12.43}, {'connected_gene': 'GATA3', 'score': 12.42}, {'connected_gene': 'GC10P008092', 'score': 0.39}, {'connected_gene': 'GC10M008036', 'score': 0.08}, {'connected_gene': 'GC10M008037', 'score': 0.08}]
chr10	GH10I007354	7354370	7355428	1.29	[{'connected_gene': 'KIN', 'score': 13.89}, {'connected_gene': 'GC10P007374', 'score': 0.37}, {'connected_gene': 'COX6CP17', 'score': 0.22}, {'connected_gene': 'SFMBT2', 'score': 0.22}]
chr10	GH10I008726	8726158	8726307	0.82	[{'connected_gene': 'KIN', 'score': 16.18}, {'connected_gene': 'ENSG00000270234', 'score': 0.77}, {'connected_gene': 'GC10P008749', 'score': 0.34}, {'connected_gene': 'LOC105376400', 'score': 0.05}]
chr10	GH10I008112	8112204	8114811	0.62	[{'connected_gene': 'KIN', 'score': 16.21}, {'connected_gene': 'LOC105376395', 'score': 0.37}, {'connected_gene': 'GC10P008092', 'score': 0.34}, {'connected_gene': 'PRPF38AP1', 'score': 0.25}, {'connected_gene': 'GC10M008036', 'score': 0.1}, {'connected_gene': 'GC10M008037', 'score': 0.1}]
chr10	GH10I007172	7172484	7173742	0.49	[{'connected_gene': 'GC10P007174', 'score': 550.77}, {'connected_gene': 'KIN', 'score': 14.76}, {'connected_gene': 'GC10M007155', 'score': 0.77}, {'connected_gene': 'SFMBT2', 'score': 0.07}]