PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000361156	[[96230456, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96239983], [96241407, 96241461], [96242056, 96242186], [96242532, 96242695], [96246197, 96246340], [96251618, 96251678], [96258256, 96258313], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96285487, 96285575], [96293548, 96294109], [96294247, 96294495], [96295296, 96295517]]	[[96234487, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96239983], [96241407, 96241461], [96242056, 96242186], [96242532, 96242695], [96246197, 96246340], [96251618, 96251678], [96258256, 96258313], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96285487, 96285575], [96293548, 96294109], [96294247, 96294283]]
ENST00000347108	[[96230456, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96239983], [96241407, 96241461], [96242056, 96242186], [96242532, 96242695], [96246197, 96246340], [96251618, 96251678], [96258256, 96258313], [96261710, 96261767], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96285487, 96285575], [96293548, 96294109], [96294247, 96294495], [96295296, 96295517]]	[[96234487, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96239983], [96241407, 96241461], [96242056, 96242186], [96242532, 96242695], [96246197, 96246340], [96251618, 96251678], [96258256, 96258313], [96261710, 96261767], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96285487, 96285575], [96293548, 96294109], [96294247, 96294283]]
ENST00000361396	[[96233370, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96239983], [96241407, 96241461], [96242056, 96242186], [96242532, 96242695], [96246197, 96246340], [96251618, 96251678], [96258256, 96258313], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96285487, 96285575], [96293548, 96294109], [96294247, 96294495], [96295296, 96295511], [96295854, 96295952], [96296630, 96296944]]	[[96234487, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96239983], [96241407, 96241461], [96242056, 96242186], [96242532, 96242695], [96246197, 96246340], [96251618, 96251678], [96258256, 96258313], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96285487, 96285575], [96293548, 96294109], [96294247, 96294283]]
ENST00000376829	[[96234205, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96239983], [96241407, 96241461], [96242056, 96242186], [96242532, 96242695], [96246197, 96246340], [96251618, 96251678], [96258256, 96258313], [96261710, 96261767], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96285487, 96285575], [96293548, 96294109], [96294247, 96294495], [96295296, 96295511], [96295854, 96295952], [96296630, 96296957]]	[[96234487, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96239983], [96241407, 96241461], [96242056, 96242186], [96242532, 96242695], [96246197, 96246340], [96251618, 96251678], [96258256, 96258313], [96261710, 96261767], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96285487, 96285575], [96293548, 96294109], [96294247, 96294283]]
ENST00000485031	[[96234223, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96240387]]	None
ENST00000479518	[[96236831, 96237164], [96238259, 96238390], [96239792, 96239928]]	None
ENST00000466569	[[96251610, 96251678], [96258256, 96258313], [96261710, 96261767], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96282967, 96283067], [96285487, 96285575], [96293548, 96294283]]	[[96283056, 96283067], [96285487, 96285575], [96293548, 96294283]]
ENST00000466027	[[96289262, 96289430], [96293548, 96294109], [96294247, 96294495], [96295296, 96295511], [96295854, 96295952], [96296630, 96296920]]	None
NM_198968	[[96230455, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96239983], [96241407, 96241461], [96242056, 96242186], [96242532, 96242695], [96246197, 96246340], [96251618, 96251678], [96258256, 96258313], [96261710, 96261767], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96285487, 96285575], [96293548, 96294109], [96294247, 96294495], [96295296, 96295511], [96295854, 96295952], [96296630, 96296960]]	[[96234487, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96239983], [96241407, 96241461], [96242056, 96242186], [96242532, 96242695], [96246197, 96246340], [96251618, 96251678], [96258256, 96258313], [96261710, 96261767], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96285487, 96285575], [96293548, 96294109], [96294247, 96294283]]
NM_014934	[[96230455, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96239983], [96241407, 96241461], [96242056, 96242186], [96242532, 96242695], [96246197, 96246340], [96251618, 96251678], [96258256, 96258313], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96285487, 96285575], [96293548, 96294109], [96294247, 96294495], [96295296, 96295511], [96295854, 96295952], [96296630, 96296960]]	[[96234487, 96234567], [96236989, 96237164], [96238259, 96238390], [96239792, 96239983], [96241407, 96241461], [96242056, 96242186], [96242532, 96242695], [96246197, 96246340], [96251618, 96251678], [96258256, 96258313], [96263698, 96263747], [96264290, 96264431], [96272138, 96272201], [96274596, 96274734], [96277021, 96277183], [96282242, 96282367], [96285487, 96285575], [96293548, 96294109], [96294247, 96294283]]

Promoter

Chrom	Start	End	Description
chr13	96239861	96239864	CAGE_peak_19_at_DZIP1_5end
chr13	96239876	96239884	CAGE_peak_14_at_DZIP1_5end
chr13	96239886	96239897	CAGE_peak_10_at_DZIP1_5end
chr13	96239905	96239916	CAGE_peak_12_at_DZIP1_5end
chr13	96240096	96240106	CAGE_peak_18_at_DZIP1_5end
chr13	96240113	96240122	CAGE_peak_15_at_DZIP1_5end
chr13	96240126	96240136	CAGE_peak_16_at_DZIP1_5end
chr13	96294368	96294373	CAGE_peak_13_at_DZIP1_5end
chr13	96294390	96294408	CAGE_peak_6_at_DZIP1_5end
chr13	96294415	96294428	CAGE_peak_8_at_DZIP1_5end
chr13	96296795	96296812	CAGE_peak_4_at_DZIP1_5end
chr13	96296815	96296854	CAGE_peak_2_at_DZIP1_5end
chr13	96296952	96296968	CAGE_peak_1_at_DZIP1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I095656	95656121	95657522	0.62	[{'connected_gene': 'DNAJC3', 'score': 20.89}, {'connected_gene': 'DNAJC3-AS1', 'score': 12.08}, {'connected_gene': 'CLDN10', 'score': 9.79}, {'connected_gene': 'DZIP1', 'score': 0.39}]
chr13	GH13I095675	95675139	95678801	2.05	[{'connected_gene': 'DNAJC3', 'score': 564.34}, {'connected_gene': 'DNAJC3-AS1', 'score': 550.77}, {'connected_gene': 'DZIP1', 'score': 19.93}, {'connected_gene': 'UGGT2', 'score': 14.38}]
chr13	GH13I095678	95678807	95679057	0.38	[{'connected_gene': 'DNAJC3', 'score': 550.77}, {'connected_gene': 'DNAJC3-AS1', 'score': 550.77}, {'connected_gene': 'DZIP1', 'score': 11.27}, {'connected_gene': 'MTND5P2', 'score': 0.39}]
chr13	GH13I095564	95564401	95565600	0.77	[{'connected_gene': 'DZIP1', 'score': 5.61}, {'connected_gene': 'CLDN10', 'score': 4.73}, {'connected_gene': 'DNAJC3', 'score': 4.62}, {'connected_gene': 'GC13M095580', 'score': 0.39}, {'connected_gene': 'GC13P095540', 'score': 0.34}]
chr13	GH13I095835	95835829	95836026	0.22	[{'connected_gene': 'DZIP1', 'score': 10.49}, {'connected_gene': 'DNAJC3', 'score': 6.15}, {'connected_gene': 'HMGN1P24', 'score': 0.31}, {'connected_gene': 'GC13M095889', 'score': 0.21}, {'connected_gene': 'UGGT2', 'score': 0.08}]
chr13	GH13I095684	95684002	95684999	0.72	[{'connected_gene': 'DZIP1', 'score': 19.85}, {'connected_gene': 'DNAJC3', 'score': 0.44}, {'connected_gene': 'MTND5P2', 'score': 0.44}]
chr13	GH13I095680	95680601	95681000	0.2	[{'connected_gene': 'DZIP1', 'score': 11.25}, {'connected_gene': 'DNAJC3', 'score': 0.77}, {'connected_gene': 'MTND5P2', 'score': 0.39}]
chr13	GH13I095679	95679267	95679416	0.31	[{'connected_gene': 'DZIP1', 'score': 11.27}, {'connected_gene': 'UGGT2', 'score': 5.58}, {'connected_gene': 'DNAJC3', 'score': 0.77}, {'connected_gene': 'MTND5P2', 'score': 0.39}]
chr13	GH13I096274	96274344	96275423	0.69	[{'connected_gene': 'DZIP1', 'score': 22.12}, {'connected_gene': 'UGGT2', 'score': 15.69}, {'connected_gene': 'GC13M096277', 'score': 0.77}, {'connected_gene': 'GC13M096146', 'score': 0.37}, {'connected_gene': 'HS6ST3', 'score': 0.09}]
chr13	GH13I095642	95642957	95645253	1.84	[{'connected_gene': 'DZIP1', 'score': 562.24}, {'connected_gene': 'UGGT2', 'score': 11.38}, {'connected_gene': 'DNAJC3-AS1', 'score': 10.69}, {'connected_gene': 'CLDN10', 'score': 4.31}, {'connected_gene': 'GC13M095581', 'score': 0.22}]
chr13	GH13I095834	95834200	95834600	0.89	[{'connected_gene': 'DZIP1', 'score': 11.01}, {'connected_gene': 'HMGN1P24', 'score': 0.34}, {'connected_gene': 'GC13M095889', 'score': 0.21}, {'connected_gene': 'UGGT2', 'score': 0.08}]
chr13	GH13I095641	95641219	95642441	1.64	[{'connected_gene': 'DZIP1', 'score': 550.77}, {'connected_gene': 'DNAJC3-AS1', 'score': 18.7}, {'connected_gene': 'DNAJC3', 'score': 11.51}, {'connected_gene': 'GC13M095581', 'score': 0.22}]
chr13	GH13I095603	95603707	95604876	0.77	[{'connected_gene': 'DZIP1', 'score': 11.86}, {'connected_gene': 'GC13M095581', 'score': 0.34}]
chr13	GH13I095623	95623647	95624366	0.62	[{'connected_gene': 'DZIP1', 'score': 0.34}, {'connected_gene': 'GC13M095581', 'score': 0.28}]
chr13	GH13I095609	95609792	95609947	0.22	[{'connected_gene': 'DZIP1', 'score': 1.67}, {'connected_gene': 'GC13M095581', 'score': 0.31}]
chr13	GH13I095265	95265617	95277282	1.64	[{'connected_gene': 'ABCC4', 'score': 21.86}, {'connected_gene': 'DZIP1', 'score': 12.1}, {'connected_gene': 'LOC102724149', 'score': 0.31}, {'connected_gene': 'GC13M095121', 'score': 0.11}]
chr13	GH13I095540	95540511	95541639	0.31	[{'connected_gene': 'GC13P095540', 'score': 550.77}, {'connected_gene': 'DZIP1', 'score': 10.84}, {'connected_gene': 'CLDN10', 'score': 9.26}, {'connected_gene': 'UGGT2', 'score': 6.13}, {'connected_gene': 'DNAJC3', 'score': 4.65}, {'connected_gene': 'GC13M095580', 'score': 0.28}]