PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000433100	[[67776047, 67776162], [67782766, 67782929], [67785996, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67796163]]	None
ENST00000539229	[[67776047, 67776162], [67782766, 67782929], [67785996, 67786065], [67786067, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789291], [67789293, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795377], [67795379, 67796741]]	[[67782767, 67782929], [67785996, 67786065], [67786067, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789291], [67789293, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795377], [67795379, 67795406]]
ENST00000316367	[[67777789, 67777862], [67782766, 67782929], [67785996, 67786065], [67786067, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67788995], [67795518, 67795607]]	[[67782767, 67782929], [67785996, 67786065], [67786067, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67788995], [67795518, 67795607]]
ENST00000007633	[[67777789, 67777862], [67782766, 67782929], [67785996, 67786065], [67786067, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789291], [67789293, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795377], [67795379, 67796741]]	[[67782767, 67782929], [67785996, 67786065], [67786067, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789291], [67789293, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795377], [67795379, 67795406]]
ENST00000342456	[[67777789, 67777862], [67782766, 67782929], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789291], [67789293, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795377], [67795379, 67796741]]	[[67782767, 67782929], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789291], [67789293, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795377], [67795379, 67795406]]
ENST00000529232	[[67777796, 67777862], [67782766, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67796744]]	None
ENST00000531459	[[67777812, 67777862], [67782766, 67782929], [67785996, 67786106], [67786241, 67786362], [67786638, 67786724], [67788953, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795624]]	None
ENST00000434449	[[67777821, 67777862], [67782766, 67782929], [67785996, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67796743]]	None
ENST00000530046	[[67777836, 67777862], [67782766, 67782929], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67796161]]	None
ENST00000525518	[[67782437, 67782545], [67782766, 67782929], [67785996, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67788991]]	None
ENST00000527179	[[67782763, 67782929], [67785996, 67786106], [67786241, 67786362], [67786638, 67786724], [67789222, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795577]]	None
ENST00000526609	[[67786050, 67786106], [67786241, 67786362], [67786534, 67786724], [67787183, 67787265], [67788953, 67789320]]	None
ENST00000527514	[[67789311, 67789339], [67790062, 67790229], [67791675, 67792083]]	None
NM_001161473	[[67776016, 67776162], [67782766, 67782929], [67785996, 67786063], [67786065, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789292], [67789294, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795378], [67795380, 67796749]]	[[67782767, 67782929], [67785996, 67786063], [67786065, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789292], [67789294, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795378], [67795380, 67795406]]
NM_001030010	[[67777774, 67777862], [67782766, 67782929], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789292], [67789294, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795378], [67795380, 67796749]]	[[67782767, 67782929], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789292], [67789294, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795378], [67795380, 67795406]]
NM_001290058	[[67777774, 67777862], [67782766, 67782929], [67785996, 67786063], [67786065, 67786106], [67786241, 67786362], [67786638, 67786724], [67789222, 67789292], [67789294, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795378], [67795380, 67796749]]	[[67782767, 67782929], [67785996, 67786063], [67786065, 67786106], [67786241, 67786362], [67786638, 67786724], [67789222, 67789292], [67789294, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795378], [67795380, 67795406]]
NM_001290059	[[67777774, 67777862], [67782766, 67782929], [67785996, 67786106], [67786241, 67786362], [67786638, 67786724], [67788953, 67789292], [67789294, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795378], [67795380, 67796749]]	[[67788979, 67789292], [67789294, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795378], [67795380, 67795406]]
NM_000694	[[67777774, 67777862], [67782766, 67782929], [67785996, 67786063], [67786065, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789292], [67789294, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795378], [67795380, 67796749]]	[[67782767, 67782929], [67785996, 67786063], [67786065, 67786106], [67786241, 67786362], [67786638, 67786724], [67787183, 67787265], [67788953, 67789292], [67789294, 67789339], [67790062, 67790229], [67793476, 67793576], [67795216, 67795378], [67795380, 67795406]]

Promoter

Chrom	Start	End	Description
chr11	67776012	67776048	CAGE_peak_3_at_ALDH3B1_5end
chr11	67776077	67776088	CAGE_peak_5_at_ALDH3B1_5end
chr11	67777751	67777808	CAGE_peak_1_at_ALDH3B1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I068807	68807314	68807875	0.43	[{'connected_gene': 'TESMIN', 'score': 10.91}, {'connected_gene': 'ALDH3B1', 'score': 4.34}, {'connected_gene': 'GC11P068804', 'score': 0.77}, {'connected_gene': 'CPT1A', 'score': 0.28}]
chr11	GH11I068002	68002100	68005240	1.97	[{'connected_gene': 'UNC93B1', 'score': 563.35}, {'connected_gene': 'NDUFS8', 'score': 10.63}, {'connected_gene': 'ENSG00000255031', 'score': 8.97}, {'connected_gene': 'ALDH3B1', 'score': 8.7}, {'connected_gene': 'MRPL21', 'score': 5.51}, {'connected_gene': 'GC11M068005', 'score': 0.44}, {'connected_gene': 'OR7E1P', 'score': 0.31}]
chr11	GH11I067990	67990081	67992373	0.49	[{'connected_gene': 'UNC93B1', 'score': 11.96}, {'connected_gene': 'ALDH3B1', 'score': 8.28}, {'connected_gene': 'OR7E1P', 'score': 0.37}]
chr11	GH11I068352	68352525	68355854	1.5	[{'connected_gene': 'C11orf24', 'score': 13.81}, {'connected_gene': 'LRP5', 'score': 8.34}, {'connected_gene': 'ALDH3B1', 'score': 1.98}, {'connected_gene': 'GC11P068379', 'score': 0.34}]
chr11	GH11I067993	67993990	67994139	0.64	[{'connected_gene': 'ALDH3B1', 'score': 8.32}, {'connected_gene': 'UNC93B1', 'score': 0.39}, {'connected_gene': 'OR7E1P', 'score': 0.37}]
chr11	GH11I068008	68008003	68015658	2.25	[{'connected_gene': 'ALDH3B1', 'score': 574.34}, {'connected_gene': 'GC11M068005', 'score': 550.77}, {'connected_gene': 'LOC105369361', 'score': 14.05}, {'connected_gene': 'NDUFS8', 'score': 13.25}, {'connected_gene': 'ENSG00000255031', 'score': 11.72}, {'connected_gene': 'UNC93B1', 'score': 5.11}, {'connected_gene': 'FAM86C2P', 'score': 4.02}]
chr11	GH11I068016	68016185	68018457	1.3	[{'connected_gene': 'ALDH3B1', 'score': 27.0}, {'connected_gene': 'LOC105369361', 'score': 14.39}, {'connected_gene': 'ENSG00000255031', 'score': 6.24}, {'connected_gene': 'GC11M068005', 'score': 0.44}]
chr11	GH11I068026	68026691	68034279	2.22	[{'connected_gene': 'LOC105369361', 'score': 565.69}, {'connected_gene': 'NDUFS8', 'score': 558.95}, {'connected_gene': 'ALDH3B1', 'score': 24.71}, {'connected_gene': 'PPP6R3', 'score': 24.19}, {'connected_gene': 'IGHMBP2', 'score': 12.44}, {'connected_gene': 'KDM2A', 'score': 11.65}, {'connected_gene': 'LOC105369362', 'score': 9.96}, {'connected_gene': 'TCIRG1', 'score': 4.96}, {'connected_gene': 'MIR4691', 'score': 0.77}, {'connected_gene': 'MIR7113', 'score': 0.77}, {'connected_gene': 'GC11M068005', 'score': 0.37}]
chr11	GH11I068025	68025173	68025322	0.49	[{'connected_gene': 'LOC105369361', 'score': 0.44}, {'connected_gene': 'GC11M068005', 'score': 0.39}, {'connected_gene': 'ALDH3B1', 'score': 0.37}]
chr11	GH11I068020	68020470	68021190	0.91	[{'connected_gene': 'LOC105369361', 'score': 15.51}, {'connected_gene': 'GC11M068005', 'score': 0.44}, {'connected_gene': 'ALDH3B1', 'score': 0.39}]
chr11	GH11I068021	68021412	68021541	0.85	[{'connected_gene': 'LOC105369361', 'score': 0.44}, {'connected_gene': 'GC11M068005', 'score': 0.39}, {'connected_gene': 'ALDH3B1', 'score': 0.39}]