PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000444948	[[149754226, 149754330], [149759921, 149760173], [149761609, 149761894], [149762792, 149762946]]	[[149754299, 149754330], [149759921, 149760173], [149761609, 149761894], [149762792, 149762946]]
ENST00000369168	[[149754245, 149754330], [149754725, 149754746], [149755558, 149755813], [149759921, 149760173], [149761609, 149761894], [149762792, 149764074]]	[[149754299, 149754330], [149754725, 149754746], [149755558, 149755813], [149759921, 149760173], [149761609, 149761894], [149762792, 149763073]]
ENST00000489479	[[149754283, 149754330], [149754725, 149755507]]	None
ENST00000489704	[[149761923, 149761961], [149762792, 149763231]]	None
NM_000566	[[149754249, 149754330], [149754725, 149754746], [149755558, 149755813], [149759921, 149760173], [149761609, 149761894], [149762792, 149764074]]	[[149754299, 149754330], [149754725, 149754746], [149755558, 149755813], [149759921, 149760173], [149761609, 149761894], [149762792, 149763073]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I149785	149785201	149786000	0.2	[{'connected_gene': 'SV2A', 'score': 5.79}, {'connected_gene': 'FCGR1A', 'score': 0.77}, {'connected_gene': 'ENSG00000233030', 'score': 0.44}, {'connected_gene': 'HIST2H2BF', 'score': 0.31}]
chr1	GH01I149775	149775401	149776443	0.75	[{'connected_gene': 'SV2A', 'score': 13.54}, {'connected_gene': 'FCGR1A', 'score': 0.44}, {'connected_gene': 'TRR-CCT8-1', 'score': 0.37}, {'connected_gene': 'HIST2H2BF', 'score': 0.28}]
chr1	GH01I149771	149771401	149771800	0.2	[{'connected_gene': 'SV2A', 'score': 13.39}, {'connected_gene': 'FCGR1A', 'score': 0.44}, {'connected_gene': 'TRR-CCT8-1', 'score': 0.39}, {'connected_gene': 'HIST2H2BF', 'score': 0.26}]
chr1	GH01I149781	149781601	149781800	0.2	[{'connected_gene': 'FCGR1A', 'score': 550.77}, {'connected_gene': 'ENSG00000233030', 'score': 0.39}, {'connected_gene': 'HIST2H2BF', 'score': 0.29}]
chr1	GH01I149782	149782201	149784600	0.7	[{'connected_gene': 'FCGR1A', 'score': 550.77}, {'connected_gene': 'ENSG00000233030', 'score': 0.44}, {'connected_gene': 'HIST2H2BF', 'score': 0.31}]
chr1	GH01I149772	149772200	149772600	0.2	[{'connected_gene': 'FCGR1A', 'score': 0.44}, {'connected_gene': 'TRR-CCT8-1', 'score': 0.37}, {'connected_gene': 'HIST2H2BF', 'score': 0.26}]
chr1	GH01I149746	149746601	149747266	0.58	[{'connected_gene': 'LOC102723955', 'score': 12.44}, {'connected_gene': 'FCGR1A', 'score': 7.98}, {'connected_gene': 'GC01M149741', 'score': 0.44}, {'connected_gene': 'TRN-GTT8-1', 'score': 0.44}]
chr1	GH01I149768	149768801	149770000	0.2	[{'connected_gene': 'TRR-CCT8-1', 'score': 0.39}, {'connected_gene': 'FCGR1A', 'score': 0.39}, {'connected_gene': 'HIST2H2BF', 'score': 0.26}]
chr1	GH01I149792	149792065	149793401	1.31	[{'connected_gene': 'ENSG00000233030', 'score': 550.77}, {'connected_gene': 'SV2A', 'score': 15.42}, {'connected_gene': 'SF3B4', 'score': 10.34}, {'connected_gene': 'FCGR1A', 'score': 0.39}, {'connected_gene': 'HIST2H2BF', 'score': 0.34}]
chr1	GH01I149787	149787401	149789000	0.66	[{'connected_gene': 'ENSG00000233030', 'score': 0.77}, {'connected_gene': 'FCGR1A', 'score': 0.44}, {'connected_gene': 'HIST2H2BF', 'score': 0.34}]