PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000278855	[[59807747, 59807996], [59810941, 59811120], [59812143, 59812247], [59814416, 59815517]]	[[59807932, 59807996], [59810941, 59811120], [59812143, 59812247], [59814416, 59814546]]
ENST00000527395	[[59807932, 59807996], [59810941, 59811206]]	None
ENST00000532905	[[59807961, 59807996], [59810941, 59811120], [59812143, 59812247], [59814186, 59814364]]	[[59810970, 59811120], [59812143, 59812247], [59814186, 59814193]]
NM_173801	[[59807747, 59807996], [59810941, 59811120], [59812143, 59812247], [59814416, 59815517]]	[[59807932, 59807996], [59810941, 59811120], [59812143, 59812247], [59814416, 59814546]]

Promoter

Chrom	Start	End	Description
chr11	59807876	59807897	CAGE_peak_1_at_PLAC1L_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I060055	60055401	60055800	0.2	[{'connected_gene': 'MS4A3', 'score': 550.77}, {'connected_gene': 'OOSP2', 'score': 0.37}]
chr11	GH11I059919	59919001	59919400	0.87	[{'connected_gene': 'TCN1', 'score': 11.41}, {'connected_gene': 'GIF', 'score': 11.38}, {'connected_gene': 'OOSP2', 'score': 10.11}, {'connected_gene': 'MS4A2', 'score': 9.7}, {'connected_gene': 'OOSP1', 'score': 0.37}, {'connected_gene': 'SRD5A3P1', 'score': 0.34}]
chr11	GH11I060204	60204061	60207503	0.76	[{'connected_gene': 'TCN1', 'score': 10.44}, {'connected_gene': 'OOSP2', 'score': 10.24}, {'connected_gene': 'MS4A6A', 'score': 6.96}, {'connected_gene': 'MS4A4E', 'score': 5.21}, {'connected_gene': 'MS4A4A', 'score': 5.17}, {'connected_gene': 'MIR6503', 'score': 0.77}]
chr11	GH11I060336	60336488	60338094	0.84	[{'connected_gene': 'MS4A6E', 'score': 11.05}, {'connected_gene': 'MS4A5', 'score': 9.25}, {'connected_gene': 'MS4A14', 'score': 5.52}, {'connected_gene': 'MS4A13', 'score': 5.25}, {'connected_gene': 'OOSP2', 'score': 4.91}, {'connected_gene': 'GC11P060374', 'score': 0.28}]
chr11	GH11I060251	60251378	60252600	0.83	[{'connected_gene': 'MS4A6E', 'score': 11.16}, {'connected_gene': 'OOSP2', 'score': 9.65}, {'connected_gene': 'MS4A6A', 'score': 7.34}, {'connected_gene': 'MS4A4A', 'score': 5.91}, {'connected_gene': 'MS4A4E', 'score': 0.44}]
chr11	GH11I059968	59968129	59968413	0.97	[{'connected_gene': 'OOSP2', 'score': 11.17}, {'connected_gene': 'MS4A3', 'score': 11.1}, {'connected_gene': 'MS4A2', 'score': 9.82}, {'connected_gene': 'MRPL16', 'score': 3.56}, {'connected_gene': 'OOSP1', 'score': 0.31}, {'connected_gene': 'LOC105369444', 'score': 0.22}]