PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000295206	[[119599746, 119600830], [119603881, 119605254]]	[[119600513, 119600830], [119603881, 119604743]]
ENST00000546667	[[119600810, 119600830], [119601499, 119601928]]	None
NM_001426	[[119599746, 119600830], [119603881, 119605759]]	[[119600513, 119600830], [119603881, 119604743]]

Promoter

Chrom	Start	End	Description
chr2	119604456	119604501	CAGE_peak_2_at_EN1_5end
chr2	119605056	119605071	CAGE_peak_10_at_EN1_5end
chr2	119605214	119605230	CAGE_peak_1_at_EN1_5end
chr2	119605233	119605245	CAGE_peak_8_at_EN1_5end
chr2	119605253	119605264	CAGE_peak_5_at_EN1_5end
chr2	119605374	119605377	CAGE_peak_7_at_EN1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I118912	118912973	118914725	0.76	[{'connected_gene': 'MARCO', 'score': 20.0}, {'connected_gene': 'EN1', 'score': 0.2}]
chr2	GH02I118910	118910061	118910080	0.22	[{'connected_gene': 'MARCO', 'score': 12.96}, {'connected_gene': 'EN1', 'score': 0.21}]
chr2	GH02I118911	118911602	118911861	0.23	[{'connected_gene': 'MARCO', 'score': 12.96}, {'connected_gene': 'EN1', 'score': 0.21}]
chr2	GH02I118903	118903662	118904068	0.42	[{'connected_gene': 'MARCO', 'score': 5.82}, {'connected_gene': 'EN1', 'score': 0.22}]
chr2	GH02I118940	118940001	118941200	0.86	[{'connected_gene': 'MARCO', 'score': 559.97}, {'connected_gene': 'DBI', 'score': 1.71}, {'connected_gene': 'EN1', 'score': 0.16}]
chr2	GH02I118881	118881645	118881734	0.8	[{'connected_gene': 'EN1', 'score': 0.29}, {'connected_gene': 'MARCO', 'score': 0.21}]
chr2	GH02I118855	118855765	118855894	0.84	[{'connected_gene': 'EN1', 'score': 0.44}, {'connected_gene': 'MARCO', 'score': 0.17}]
chr2	GH02I118846	118846800	118849567	1.78	[{'connected_gene': 'EN1', 'score': 550.77}, {'connected_gene': 'MARCO', 'score': 0.16}]
chr2	GH02I118882	118882545	118883400	0.95	[{'connected_gene': 'EN1', 'score': 0.29}, {'connected_gene': 'MARCO', 'score': 0.22}]
chr2	GH02I118842	118842082	118846474	0.79	[{'connected_gene': 'EN1', 'score': 0.77}, {'connected_gene': 'LINC01956', 'score': 0.44}]
chr2	GH02I118222	118222125	118222274	0.6	[{'connected_gene': 'EN1', 'score': 11.91}, {'connected_gene': 'LOC105373578', 'score': 0.77}, {'connected_gene': 'LOC100506797', 'score': 0.28}, {'connected_gene': 'GC02M118174', 'score': 0.05}]
chr2	GH02I118926	118926001	118926600	0.71	[{'connected_gene': 'DBI', 'score': 1.95}, {'connected_gene': 'MARCO', 'score': 0.37}, {'connected_gene': 'EN1', 'score': 0.18}]
chr2	GH02I118936	118936180	118937200	0.72	[{'connected_gene': 'DBI', 'score': 1.86}, {'connected_gene': 'MARCO', 'score': 0.44}, {'connected_gene': 'EN1', 'score': 0.17}]
chr2	GH02I118902	118902201	118903194	0.87	[{'connected_gene': 'DBI', 'score': 1.17}, {'connected_gene': 'MARCO', 'score': 0.28}, {'connected_gene': 'EN1', 'score': 0.23}]
chr2	GH02I118929	118929172	118929375	0.49	[{'connected_gene': 'DBI', 'score': 1.6}, {'connected_gene': 'MARCO', 'score': 0.39}, {'connected_gene': 'EN1', 'score': 0.18}]
chr2	GH02I118835	118835600	118835801	0.68	[{'connected_gene': 'LINC01956', 'score': 550.77}, {'connected_gene': 'EN1', 'score': 0.39}]
chr2	GH02I118925	118925598	118925808	0.47	[{'connected_gene': 'LOC105373580', 'score': 5.12}, {'connected_gene': 'DBI', 'score': 1.8}, {'connected_gene': 'MARCO', 'score': 0.37}, {'connected_gene': 'EN1', 'score': 0.18}]
chr2	GH02I118223	118223271	118226225	0.77	[{'connected_gene': 'LOC105373578', 'score': 550.77}, {'connected_gene': 'EN1', 'score': 11.91}, {'connected_gene': 'LOC105373579', 'score': 0.06}, {'connected_gene': 'GC02M118174', 'score': 0.04}]