PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000343433	[[57184476, 57185365], [57185694, 57185728], [57185845, 57186002], [57189260, 57189354], [57192169, 57192256], [57202759, 57202820], [57204297, 57204326], [57206369, 57206468], [57207833, 57207894], [57209698, 57209739], [57209824, 57209939], [57216716, 57216876], [57219511, 57219608], [57221568, 57221600], [57224388, 57224423], [57233501, 57233611], [57252847, 57252881], [57254645, 57254807], [57257728, 57258476], [57284954, 57285044]]	[[57185343, 57185365], [57185694, 57185728], [57185845, 57186002], [57189260, 57189354], [57192169, 57192256], [57202759, 57202820], [57204297, 57204326], [57206369, 57206468], [57207833, 57207894], [57209698, 57209739], [57209824, 57209939], [57216716, 57216876], [57219511, 57219608], [57221568, 57221600], [57224388, 57224423], [57233501, 57233611], [57252847, 57252881], [57254645, 57254807], [57257728, 57258476], [57284954, 57284963]]
ENST00000484327	[[57192216, 57192256], [57197564, 57197640], [57202759, 57202820], [57204297, 57204326], [57206369, 57206468], [57207833, 57207894], [57209698, 57209739], [57209824, 57209939], [57216716, 57216876], [57233501, 57233611], [57252847, 57252881], [57254645, 57254807], [57257728, 57258476], [57284954, 57285369]]	None
ENST00000493000	[[57184543, 57185365], [57185694, 57185728], [57185845, 57186002], [57189260, 57189354], [57192169, 57192256], [57202759, 57202820], [57206369, 57206468], [57209698, 57209739], [57209824, 57209939], [57216716, 57216876], [57219511, 57219608], [57221568, 57221600], [57224388, 57224423], [57227616, 57227686]]	None
ENST00000497991	[[57185322, 57185365], [57185694, 57185728], [57185845, 57186529]]	None
ENST00000371240	[[57192220, 57192256], [57202759, 57203320]]	None

Promoter

Chrom	Start	End	Description
chr1	57285038	57285048	CAGE_peak_4_at_C1orf168_5end
chr1	57285049	57285092	CAGE_peak_1_at_C1orf168_5end
chr1	57285332	57285349	CAGE_peak_3_at_C1orf168_5end
chr1	57285367	57285396	CAGE_peak_2_at_C1orf168_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I056574	56574800	56582386	2.5	[{'connected_gene': 'PLPP3', 'score': 554.69}, {'connected_gene': 'C8A', 'score': 8.33}, {'connected_gene': 'FYB2', 'score': 7.87}, {'connected_gene': 'C8B', 'score': 6.59}, {'connected_gene': 'PRKAA2', 'score': 4.96}, {'connected_gene': 'RPL23AP85', 'score': 0.44}, {'connected_gene': 'GC01P056539', 'score': 0.26}]
chr1	GH01I056907	56907863	56912072	1.17	[{'connected_gene': 'C8B', 'score': 21.73}, {'connected_gene': 'C8A', 'score': 19.25}, {'connected_gene': 'FYB2', 'score': 18.15}, {'connected_gene': 'GC01P056889', 'score': 0.34}, {'connected_gene': 'LOC105378745', 'score': 0.23}]
chr1	GH01I057279	57279420	57283946	1.18	[{'connected_gene': 'C8A', 'score': 4.02}, {'connected_gene': 'C8B', 'score': 3.63}, {'connected_gene': 'FYB2', 'score': 2.39}, {'connected_gene': 'GC01P057267', 'score': 0.39}, {'connected_gene': 'GC01P057293', 'score': 0.39}]
chr1	GH01I057006	57006755	57006879	0.22	[{'connected_gene': 'FYB2', 'score': 5.49}, {'connected_gene': 'C8A', 'score': 5.05}, {'connected_gene': 'C8B', 'score': 3.8}, {'connected_gene': 'GC01P057000', 'score': 0.44}, {'connected_gene': 'LOC105378748', 'score': 0.39}]
chr1	GH01I056774	56774001	56774400	0.63	[{'connected_gene': 'FYB2', 'score': 0.25}, {'connected_gene': 'GC01P056713', 'score': 0.21}]
chr1	GH01I056820	56820992	56821703	1.01	[{'connected_gene': 'FYB2', 'score': 550.77}, {'connected_gene': 'ENSG00000229913', 'score': 0.44}]
chr1	GH01I056815	56815886	56819987	1.63	[{'connected_gene': 'FYB2', 'score': 550.77}, {'connected_gene': 'GC01P056713', 'score': 0.15}]
chr1	GH01I056787	56787998	56789128	0.56	[{'connected_gene': 'ENSG00000229913', 'score': 10.79}, {'connected_gene': 'FYB2', 'score': 0.29}, {'connected_gene': 'GC01P056713', 'score': 0.19}]